Cow genome map
| Conread name: | Ss1.1-Spl1-SPL01E070044.5 |
| Conread position: | 415-983 |
| Cow position: | chr21:12608822-12608251 (view UCSC Genome Browser custom track) |
| Alignm length: | 577 |
| Alignm identity: | 356 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 49, 36 |
| Conread position: | 533-979 |
| Cow position: | chr21:12608869-12608423 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 83 |
| Conread position: | 533-980 |
| Cow position: | chr21:34223156-34222712 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 281 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 24, 12 |
| Conread position: | 533-984 |
| Cow position: | chr21:34222991-34222540 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 75 |
| Conread position: | 536-978 |
| Cow position: | chr21:12608614-12608172 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 72 |
| Conread position: | 536-980 |
| Cow position: | chr21:12608530-12608088 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 58 |
| Conread position: | 545-983 |
| Cow position: | chr21:12658821-12659259 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 69 |
| Conread position: | 556-942 |
| Cow position: | chr21:12608762-12608376 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 53 |
| Conread position: | 557-820 |
| Cow position: | chr21:12659757-12660020 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 63, 51 |
| Conread position: | 557-983 |
| Cow position: | chr21:12658917-12659343 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 47 |
| Conread position: | 557-983 |
| Cow position: | chr21:12659001-12659427 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 51 |
| Conread position: | 557-983 |
| Cow position: | chr21:12659085-12659511 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 51 |
| Conread position: | 557-983 |
| Cow position: | chr21:12659169-12659595 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 51 |
| Conread position: | 557-983 |
| Cow position: | chr21:12659253-12659679 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 36 |
| Conread position: | 557-983 |
| Cow position: | chr21:12659337-12659763 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 57 |
| Conread position: | 557-983 |
| Cow position: | chr21:12659421-12659847 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 51 |
| Conread position: | 557-983 |
| Cow position: | chr21:12659505-12659931 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 51 |
| Conread position: | 557-983 |
| Cow position: | chr21:34223051-34222625 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 53 |
| Conread position: | 557-984 |
| Cow position: | chr21:12659589-12660016 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 386, 399 |
| Conread position: | 571-983 |
| Cow position: | chr21:12608915-12608503 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 43 |
| Conread position: | 593-938 |
| Cow position: | chr21:12608305-12607960 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 232 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 27, 23 |
Show alignments to all cow chromosomes.