Cow genome map
| Conread name: | Ss1.1-Spl1-SPL01E070044.5 |
| Conread position: | 406-933 |
| Cow position: | |
| Alignm length: | 537 |
| Alignm identity: | 327 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 127, 279 |
| Conread position: | 406-978 |
| Cow position: | |
| Alignm length: | 579 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 73 |
| Conread position: | 406-981 |
| Cow position: | |
| Alignm length: | 582 |
| Alignm identity: | 350 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 50, 28 |
| Conread position: | 406-981 |
| Cow position: | |
| Alignm length: | 581 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 99 |
| Conread position: | 406-981 |
| Cow position: | |
| Alignm length: | 581 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 99 |
| Conread position: | 407-821 |
| Cow position: | |
| Alignm length: | 422 |
| Alignm identity: | 277 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 55, 72 |
| Conread position: | 407-896 |
| Cow position: | |
| Alignm length: | 496 |
| Alignm identity: | 309 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 107, 208 |
| Conread position: | 407-983 |
| Cow position: | |
| Alignm length: | 582 |
| Alignm identity: | 350 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 62, 55 |
| Conread position: | 407-984 |
| Cow position: | |
| Alignm length: | 585 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 26 |
| Conread position: | 416-981 |
| Cow position: | |
| Alignm length: | 571 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 63 |
| Conread position: | 476-983 |
| Cow position: | |
| Alignm length: | 511 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 477-932 |
| Cow position: | |
| Alignm length: | 466 |
| Alignm identity: | 299 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 51, 135 |
| Conread position: | 477-981 |
| Cow position: | |
| Alignm length: | 516 |
| Alignm identity: | 326 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 51, 135 |
| Conread position: | 479-983 |
| Cow position: | |
| Alignm length: | 510 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 133 |
| Conread position: | 532-978 |
| Cow position: | |
| Alignm length: | 452 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 13 |
| Conread position: | 534-914 |
| Cow position: | |
| Alignm length: | 385 |
| Alignm identity: | 253 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 20, 11 |
| Conread position: | 534-915 |
| Cow position: | |
| Alignm length: | 386 |
| Alignm identity: | 257 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 20, 11 |
| Conread position: | 534-981 |
| Cow position: | |
| Alignm length: | 450 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 20 |
| Conread position: | 534-981 |
| Cow position: | |
| Alignm length: | 449 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 330, 320 |
| Conread position: | 534-983 |
| Cow position: | |
| Alignm length: | 452 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 330, 319 |
| Conread position: | 535-924 |
| Cow position: | |
| Alignm length: | 392 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 324, 318 |
| Conread position: | 535-948 |
| Cow position: | |
| Alignm length: | 416 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 22 |
| Conread position: | 535-981 |
| Cow position: | |
| Alignm length: | 449 |
| Alignm identity: | 281 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 86, 68 |
| Conread position: | 535-983 |
| Cow position: | |
| Alignm length: | 450 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 329, 320 |
| Conread position: | 536-817 |
| Cow position: | |
| Alignm length: | 285 |
| Alignm identity: | 192 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 77, 63 |
| Conread position: | 536-887 |
| Cow position: | |
| Alignm length: | 355 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 81, 72 |
| Conread position: | 536-981 |
| Cow position: | |
| Alignm length: | 448 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 12 |
| Conread position: | 536-981 |
| Cow position: | |
| Alignm length: | 451 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 85 |
| Conread position: | 536-981 |
| Cow position: | |
| Alignm length: | 446 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 536-981 |
| Cow position: | |
| Alignm length: | 449 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 130 |
| Conread position: | 536-981 |
| Cow position: | |
| Alignm length: | 448 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 21 |
| Conread position: | 536-981 |
| Cow position: | |
| Alignm length: | 446 |
| Alignm identity: | 276 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 536-981 |
| Cow position: | |
| Alignm length: | 446 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 536-983 |
| Cow position: | |
| Alignm length: | 451 |
| Alignm identity: | 281 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 85, 70 |
| Conread position: | 536-983 |
| Cow position: | |
| Alignm length: | 451 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 75 |
| Conread position: | 536-983 |
| Cow position: | |
| Alignm length: | 450 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 329, 321 |
| Conread position: | 536-984 |
| Cow position: | |
| Alignm length: | 451 |
| Alignm identity: | 279 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 235, 222 |
| Conread position: | 537-945 |
| Cow position: | |
| Alignm length: | 415 |
| Alignm identity: | 262 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 11, 153 |
| Conread position: | 552-933 |
| Cow position: | |
| Alignm length: | 388 |
| Alignm identity: | 239 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 69, 49 |
| Conread position: | 553-803 |
| Cow position: | |
| Alignm length: | 251 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 553-897 |
| Cow position: | |
| Alignm length: | 347 |
| Alignm identity: | 224 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 66, 55 |
| Conread position: | 553-943 |
| Cow position: | |
| Alignm length: | 392 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 106, 111 |
| Conread position: | 553-969 |
| Cow position: | |
| Alignm length: | 418 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 68 |
| Conread position: | 553-978 |
| Cow position: | |
| Alignm length: | 427 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 312, 319 |
| Conread position: | 553-980 |
| Cow position: | |
| Alignm length: | 432 |
| Alignm identity: | 264 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 62, 45 |
| Conread position: | 553-981 |
| Cow position: | |
| Alignm length: | 432 |
| Alignm identity: | 253 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 211, 238 |
| Conread position: | 553-982 |
| Cow position: | |
| Alignm length: | 432 |
| Alignm identity: | 268 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 106, 111 |
| Conread position: | 553-983 |
| Cow position: | |
| Alignm length: | 433 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 52 |
| Conread position: | 553-983 |
| Cow position: | |
| Alignm length: | 432 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 52 |
| Conread position: | 553-983 |
| Cow position: | |
| Alignm length: | 438 |
| Alignm identity: | 284 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 148, 130 |
| Conread position: | 553-983 |
| Cow position: | |
| Alignm length: | 437 |
| Alignm identity: | 262 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 155, 131 |
| Conread position: | 553-984 |
| Cow position: | |
| Alignm length: | 433 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 313, 319 |
| Conread position: | 556-932 |
| Cow position: | |
| Alignm length: | 380 |
| Alignm identity: | 234 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 57, 42 |
| Conread position: | 556-981 |
| Cow position: | |
| Alignm length: | 427 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 59 |
| Conread position: | 556-981 |
| Cow position: | |
| Alignm length: | 432 |
| Alignm identity: | 262 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 59, 48 |
| Conread position: | 556-983 |
| Cow position: | |
| Alignm length: | 434 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 292, 312 |
| Conread position: | 556-984 |
| Cow position: | |
| Alignm length: | 433 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 51 |
| Conread position: | 557-903 |
| Cow position: | |
| Alignm length: | 347 |
| Alignm identity: | 227 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 557-930 |
| Cow position: | |
| Alignm length: | 374 |
| Alignm identity: | 238 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 557-932 |
| Cow position: | |
| Alignm length: | 378 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 57 |
| Conread position: | 557-938 |
| Cow position: | |
| Alignm length: | 384 |
| Alignm identity: | 245 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 122, 132 |
| Conread position: | 557-969 |
| Cow position: | |
| Alignm length: | 413 |
| Alignm identity: | 259 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 557-981 |
| Cow position: | |
| Alignm length: | 426 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 298, 306 |
| Conread position: | 557-981 |
| Cow position: | |
| Alignm length: | 429 |
| Alignm identity: | 267 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 148, 127 |
| Conread position: | 557-983 |
| Cow position: | |
| Alignm length: | 428 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 301, 293 |
| Conread position: | 558-932 |
| Cow position: | |
| Alignm length: | 377 |
| Alignm identity: | 246 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 61, 51 |
| Conread position: | 558-969 |
| Cow position: | |
| Alignm length: | 412 |
| Alignm identity: | 253 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 558-981 |
| Cow position: | |
| Alignm length: | 426 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 228 |
| Conread position: | 558-981 |
| Cow position: | |
| Alignm length: | 425 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 56 |
| Conread position: | 558-983 |
| Cow position: | |
| Alignm length: | 443 |
| Alignm identity: | 258 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 271, 0 |
| Conread position: | 559-762 |
| Cow position: | |
| Alignm length: | 205 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 45, 40 |
| Conread position: | 559-981 |
| Cow position: | |
| Alignm length: | 426 |
| Alignm identity: | 274 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 139, 132 |
| Conread position: | 559-981 |
| Cow position: | |
| Alignm length: | 424 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 40 |
| Conread position: | 559-983 |
| Cow position: | |
| Alignm length: | 429 |
| Alignm identity: | 280 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 139, 130 |
| Conread position: | 559-983 |
| Cow position: | |
| Alignm length: | 430 |
| Alignm identity: | 273 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 65, 69 |
| Conread position: | 560-981 |
| Cow position: | |
| Alignm length: | 424 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 379, 386 |
| Conread position: | 563-982 |
| Cow position: | |
| Alignm length: | 422 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 45 |
| Conread position: | 564-981 |
| Cow position: | |
| Alignm length: | 426 |
| Alignm identity: | 278 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 57, 44 |
| Conread position: | 566-933 |
| Cow position: | |
| Alignm length: | 370 |
| Alignm identity: | 229 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 247, 225 |
| Conread position: | 566-981 |
| Cow position: | |
| Alignm length: | 416 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 566-983 |
| Cow position: | |
| Alignm length: | 419 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 390, 386 |
| Conread position: | 566-983 |
| Cow position: | |
| Alignm length: | 420 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 42 |
| Conread position: | 567-981 |
| Cow position: | |
| Alignm length: | 419 |
| Alignm identity: | 266 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 34, 26 |
| Conread position: | 570-981 |
| Cow position: | |
| Alignm length: | 413 |
| Alignm identity: | 266 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 37, 22 |
| Conread position: | 572-981 |
| Cow position: | |
| Alignm length: | 411 |
| Alignm identity: | 264 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 32, 27 |
| Conread position: | 581-920 |
| Cow position: | |
| Alignm length: | 346 |
| Alignm identity: | 216 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 145, 139 |
| Conread position: | 620-983 |
| Cow position: | |
| Alignm length: | 367 |
| Alignm identity: | 235 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 156, 161 |
| Conread position: | 621-983 |
| Cow position: | |
| Alignm length: | 363 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 622-796 |
| Cow position: | |
| Alignm length: | 175 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 630-981 |
| Cow position: | |
| Alignm length: | 353 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 230, 14 |
| Conread position: | 637-931 |
| Cow position: | |
| Alignm length: | 296 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 222, 218 |
| Conread position: | 653-984 |
| Cow position: | |
| Alignm length: | 335 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 198, 207 |
| Conread position: | 664-983 |
| Cow position: | |
| Alignm length: | 324 |
| Alignm identity: | 203 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 212, 202 |
| Conread position: | 682-944 |
| Cow position: | |
| Alignm length: | 264 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 177, 173 |
| Conread position: | 789-981 |
| Cow position: | |
| Alignm length: | 193 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.