Cow genome map
| Conread name: | Ss1.1-Spl1-SPL01E070044.5 |
| Conread position: | 396-981 |
| Cow position: | chr25:33157469-33156881 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 37 |
| Conread position: | 398-978 |
| Cow position: | chr25:34446944-34447527 (view UCSC Genome Browser custom track) |
| Alignm length: | 587 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 159 |
| Conread position: | 406-961 |
| Cow position: | chr25:34447036-34447594 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 206 |
| Conread position: | 406-981 |
| Cow position: | chr25:33299081-33299659 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 28 |
| Conread position: | 407-762 |
| Cow position: | chr25:34769605-34769247 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 236 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 121, 150 |
| Conread position: | 453-946 |
| Cow position: | chr25:36800776-36801272 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 107 |
| Conread position: | 471-949 |
| Cow position: | chr25:33305325-33304848 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 306 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 7, 148 |
| Conread position: | 471-961 |
| Cow position: | chr25:34714029-34714522 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 308 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 47, 34 |
| Conread position: | 474-899 |
| Cow position: | chr25:22235912-22236339 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 265 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 53, 5 |
| Conread position: | 477-803 |
| Cow position: | chr25:36801628-36801957 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 42, 301 |
| Conread position: | 477-981 |
| Cow position: | chr25:34769787-34769280 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 80 |
| Conread position: | 532-948 |
| Cow position: | chr25:34713841-34714257 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 256 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 16, 35 |
| Conread position: | 532-983 |
| Cow position: | chr25:34762805-34763252 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 288 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 211, 6 |
| Conread position: | 533-803 |
| Cow position: | chr25:33299547-33299817 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 248, 242 |
| Conread position: | 533-983 |
| Cow position: | chr25:34763138-34763585 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 284 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 331, 314 |
| Conread position: | 534-890 |
| Cow position: | chr25:34714179-34714535 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 223 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 88, 81 |
| Conread position: | 534-942 |
| Cow position: | chr25:22235890-22236298 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 263 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 316, 328 |
| Conread position: | 534-981 |
| Cow position: | chr25:34447251-34447698 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 534-983 |
| Cow position: | chr25:34473568-34474014 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 272 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 134, 142 |
| Conread position: | 535-819 |
| Cow position: | chr25:34769558-34769274 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 202 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 79, 64 |
| Conread position: | 535-925 |
| Cow position: | chr25:36800945-36801335 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 255 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 12, 22 |
| Conread position: | 535-927 |
| Cow position: | chr25:33299465-33299853 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 253 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 13, 22 |
| Conread position: | 535-957 |
| Cow position: | chr25:34433502-34433920 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 261 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 13, 22 |
| Conread position: | 535-960 |
| Cow position: | chr25:23420445-23420870 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 273 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 241, 251 |
| Conread position: | 535-969 |
| Cow position: | chr25:34763308-34763739 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 270 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 149, 0 |
| Conread position: | 535-977 |
| Cow position: | chr25:34447504-34447935 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 281 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 334, 204 |
| Conread position: | 535-983 |
| Cow position: | chr25:33298793-33299241 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 128 |
| Conread position: | 535-983 |
| Cow position: | chr25:33299045-33299493 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 535-983 |
| Cow position: | chr25:33299297-33299745 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 279 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 535-983 |
| Cow position: | chr25:34770062-34769614 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 535-983 |
| Cow position: | chr25:36800693-36801141 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 74 |
| Conread position: | 536-818 |
| Cow position: | chr25:33127949-33128231 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 214, 208 |
| Conread position: | 536-900 |
| Cow position: | chr25:33157158-33156794 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 72 |
| Conread position: | 536-937 |
| Cow position: | chr25:33298878-33299279 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 253 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 12, 21 |
| Conread position: | 536-969 |
| Cow position: | chr25:33127781-33128214 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 536-981 |
| Cow position: | chr25:33299130-33299575 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 21 |
| Conread position: | 536-981 |
| Cow position: | chr25:34433587-34434026 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 270 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 71, 11 |
| Conread position: | 536-981 |
| Cow position: | chr25:34769977-34769532 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 332, 337 |
| Conread position: | 536-983 |
| Cow position: | chr25:33157410-33156963 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 329, 316 |
| Conread position: | 539-930 |
| Cow position: | chr25:34732627-34732234 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 544-931 |
| Cow position: | chr25:33306475-33306097 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 553-858 |
| Cow position: | chr25:23420547-23420851 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 207 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 301, 0 |
| Conread position: | 553-895 |
| Cow position: | chr25:33145094-33145436 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 72, 46 |
| Conread position: | 553-963 |
| Cow position: | chr25:34446934-34447344 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 110 |
| Conread position: | 553-981 |
| Cow position: | chr25:34769792-34769364 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 227, 223 |
| Conread position: | 553-984 |
| Cow position: | chr25:36844624-36844202 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 278 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 66, 57 |
| Conread position: | 554-931 |
| Cow position: | chr25:33305965-33305596 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 237 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 554-961 |
| Cow position: | chr25:346445-346852 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 264 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 105, 110 |
| Conread position: | 554-972 |
| Cow position: | chr25:3675989-3676407 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 252 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 388, 402 |
| Conread position: | 554-983 |
| Cow position: | chr25:25652185-25652614 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 555-885 |
| Cow position: | chr25:366723-367053 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 216 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 104, 109 |
| Conread position: | 556-729 |
| Cow position: | chr25:36801794-36801967 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 149, 136 |
| Conread position: | 556-858 |
| Cow position: | chr25:18642172-18641867 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 556-895 |
| Cow position: | chr25:346531-346869 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 219 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 143, 149 |
| Conread position: | 556-895 |
| Cow position: | chr25:36801626-36801963 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 309, 298 |
| Conread position: | 556-902 |
| Cow position: | chr25:33127885-33128231 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 278, 271 |
| Conread position: | 556-903 |
| Cow position: | chr25:34732105-34731757 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 104, 109 |
| Conread position: | 556-946 |
| Cow position: | chr25:33299402-33299792 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 252 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 64, 55 |
| Conread position: | 556-946 |
| Cow position: | chr25:36801542-36801932 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 250 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 65, 53 |
| Conread position: | 556-955 |
| Cow position: | chr25:34447357-34447755 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 262 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 147, 136 |
| Conread position: | 556-980 |
| Cow position: | chr25:34447021-34447445 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 316, 310 |
| Conread position: | 556-981 |
| Cow position: | chr25:23420382-23420807 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 309, 316 |
| Conread position: | 556-983 |
| Cow position: | chr25:33157222-33156795 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 52 |
| Conread position: | 556-983 |
| Cow position: | chr25:33298646-33299073 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 52 |
| Conread position: | 556-983 |
| Cow position: | chr25:36801374-36801801 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 42 |
| Conread position: | 557-764 |
| Cow position: | chr25:34433020-34433227 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 557-802 |
| Cow position: | chr25:34733925-34733680 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 557-803 |
| Cow position: | chr25:33145182-33145428 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 557-841 |
| Cow position: | chr25:33305718-33305433 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 64, 57 |
| Conread position: | 557-931 |
| Cow position: | chr25:25652944-25653318 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 240 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 65, 51 |
| Conread position: | 557-954 |
| Cow position: | chr25:33530397-33530793 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 248 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 393, 0 |
| Conread position: | 557-963 |
| Cow position: | chr25:3664099-3664505 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 258 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 557-965 |
| Cow position: | chr25:25652440-25652848 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 51 |
| Conread position: | 557-969 |
| Cow position: | chr25:3664183-3664595 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 261 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 65, 59 |
| Conread position: | 557-969 |
| Cow position: | chr25:25652608-25653020 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 49 |
| Conread position: | 557-978 |
| Cow position: | chr25:36800547-36800968 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 265 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 557-979 |
| Cow position: | chr25:25652524-25652946 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 57 |
| Conread position: | 557-979 |
| Cow position: | chr25:33530313-33530735 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 253 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 557-980 |
| Cow position: | chr25:33298479-33298902 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 49 |
| Conread position: | 557-981 |
| Cow position: | chr25:326581-327011 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 264 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 293, 307 |
| Conread position: | 557-981 |
| Cow position: | chr25:34763246-34763667 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 270 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 64, 52 |
| Conread position: | 557-983 |
| Cow position: | chr25:3664015-3664441 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 57 |
| Conread position: | 557-983 |
| Cow position: | chr25:22235829-22236255 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 40 |
| Conread position: | 557-983 |
| Cow position: | chr25:25652356-25652782 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 557-983 |
| Cow position: | chr25:33144933-33145356 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 328, 104 |
| Conread position: | 557-983 |
| Cow position: | chr25:33157473-33157047 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 42 |
| Conread position: | 557-983 |
| Cow position: | chr25:33298731-33299157 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 557-983 |
| Cow position: | chr25:34762997-34763420 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 271 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 388, 127 |
| Conread position: | 557-983 |
| Cow position: | chr25:36800463-36800889 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 257 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 63, 39 |
| Conread position: | 557-983 |
| Cow position: | chr25:36801459-36801885 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 267 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 64, 54 |
| Conread position: | 558-810 |
| Cow position: | chr25:427330-427582 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 558-983 |
| Cow position: | chr25:3663932-3664357 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 398, 392 |
| Conread position: | 558-983 |
| Cow position: | chr25:33305401-33304980 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 269 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 57, 63 |
| Conread position: | 559-940 |
| Cow position: | chr25:326500-326880 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 251 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 128, 8 |
| Conread position: | 559-952 |
| Cow position: | chr25:33305878-33305491 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 234 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 559-983 |
| Cow position: | chr25:4657463-4657039 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 136 |
| Conread position: | 559-983 |
| Cow position: | chr25:34473509-34473930 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 268 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 62, 49 |
| Conread position: | 559-984 |
| Cow position: | chr25:33298565-33298990 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 212, 220 |
| Conread position: | 559-984 |
| Cow position: | chr25:36800633-36801058 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 274 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 62, 53 |
| Conread position: | 560-935 |
| Cow position: | chr25:33529101-33529476 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 560-980 |
| Cow position: | chr25:34714037-34714457 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 268 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 33, 25 |
| Conread position: | 560-981 |
| Cow position: | chr25:34770121-34769700 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 220, 216 |
| Conread position: | 562-931 |
| Cow position: | chr25:33145022-33145388 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 296, 14 |
| Conread position: | 562-981 |
| Cow position: | chr25:3636557-3636138 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 261 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 143, 134 |
| Conread position: | 569-931 |
| Cow position: | chr25:33306286-33305926 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 195, 106 |
| Conread position: | 571-896 |
| Cow position: | chr25:34733995-34733670 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 222 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 48, 37 |
| Conread position: | 571-969 |
| Cow position: | chr25:33529028-33529426 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 243 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 572-983 |
| Cow position: | chr25:33127733-33128144 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 576-905 |
| Cow position: | chr25:18641405-18641089 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 260, 108 |
| Conread position: | 578-811 |
| Cow position: | chr25:34714307-34714540 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 40, 19 |
| Conread position: | 578-936 |
| Cow position: | chr25:33506769-33507127 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 220 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 578-948 |
| Cow position: | chr25:414675-414308 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 238 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 39, 30 |
| Conread position: | 578-981 |
| Cow position: | chr25:23420320-23420723 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 192 |
| Conread position: | 578-981 |
| Cow position: | chr25:34446875-34447278 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 33 |
| Conread position: | 578-983 |
| Cow position: | chr25:25652293-25652698 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 280, 275 |
| Conread position: | 579-840 |
| Cow position: | chr25:414753-414497 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 174 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 581-812 |
| Cow position: | chr25:34732416-34732185 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 581-888 |
| Cow position: | chr25:3664291-3664598 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 41, 35 |
| Conread position: | 581-896 |
| Cow position: | chr25:326947-327262 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 220 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 40, 30 |
| Conread position: | 581-981 |
| Cow position: | chr25:33157532-33157133 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 11 |
| Conread position: | 581-984 |
| Cow position: | chr25:25652884-25653287 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 277, 272 |
| Conread position: | 584-981 |
| Cow position: | chr25:33127661-33128058 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 24 |
| Conread position: | 592-979 |
| Cow position: | chr25:3636443-3636056 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 29, 20 |
| Conread position: | 602-954 |
| Cow position: | chr25:18642210-18641855 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 134, 184 |
| Conread position: | 604-980 |
| Cow position: | chr25:326376-326752 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 241 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 97, 104 |
| Conread position: | 604-981 |
| Cow position: | chr25:36801338-36801715 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 232 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 20, 10 |
| Conread position: | 605-981 |
| Cow position: | chr25:34713830-34714206 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 230 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 195, 186 |
| Conread position: | 612-984 |
| Cow position: | chr25:326469-326840 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 243 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 33, 11 |
| Conread position: | 616-941 |
| Cow position: | chr25:414799-414480 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 211 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 43, 53 |
| Conread position: | 618-983 |
| Cow position: | chr25:33157580-33157215 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 36 |
| Conread position: | 620-969 |
| Cow position: | chr25:34473738-34474084 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 48, 58 |
| Conread position: | 620-981 |
| Cow position: | chr25:34433503-34433861 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 224 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 158, 102 |
| Conread position: | 620-983 |
| Cow position: | chr25:34770145-34769782 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 621-983 |
| Cow position: | chr25:23420210-23420557 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 234 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 240, 65 |
| Conread position: | 631-983 |
| Cow position: | chr25:24385258-24384906 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 232 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 46, 39 |
| Conread position: | 631-983 |
| Cow position: | chr25:33298469-33298821 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 241, 227 |
| Conread position: | 634-982 |
| Cow position: | chr25:34732615-34732267 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 145 |
| Conread position: | 635-910 |
| Cow position: | chr25:36844626-36844351 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 636-983 |
| Cow position: | chr25:346443-346790 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 307, 316 |
| Conread position: | 640-948 |
| Cow position: | chr25:34732105-34731797 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 115, 121 |
| Conread position: | 640-970 |
| Cow position: | chr25:366724-367054 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 641-948 |
| Cow position: | chr25:24398738-24398431 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 30, 44 |
| Conread position: | 643-983 |
| Cow position: | chr25:4657463-4657123 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 217 |
| Conread position: | 653-981 |
| Cow position: | chr25:23420311-23420639 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 222 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 120, 126 |
| Conread position: | 656-983 |
| Cow position: | chr25:3636547-3636220 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 198 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 662-959 |
| Cow position: | chr25:34733988-34733691 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 205 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 111, 117 |
| Conread position: | 662-979 |
| Cow position: | chr25:33506769-33507086 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 96, 107 |
| Conread position: | 665-981 |
| Cow position: | chr25:326947-327263 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 40, 36 |
| Conread position: | 686-983 |
| Cow position: | chr25:34770163-34769866 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 97, 90 |
| Conread position: | 694-983 |
| Cow position: | chr25:34446906-34447196 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 5, 22 |
| Conread position: | 702-979 |
| Cow position: | chr25:33529075-33529352 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 254, 250 |
| Conread position: | 714-981 |
| Cow position: | chr25:36844631-36844364 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 173 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 716-983 |
| Cow position: | chr25:23267260-23266993 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 118, 42 |
| Conread position: | 716-983 |
| Cow position: | chr25:33530304-33530571 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 718-983 |
| Cow position: | chr25:34732615-34732350 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 143, 138 |
| Conread position: | 722-969 |
| Cow position: | chr25:34734012-34733765 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 134, 139 |
| Conread position: | 722-979 |
| Cow position: | chr25:33144846-33145100 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 136, 132 |
| Conread position: | 725-983 |
| Cow position: | chr25:24398738-24398480 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 726-978 |
| Cow position: | chr25:427330-427582 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 740-979 |
| Cow position: | chr25:33506763-33507002 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 772-983 |
| Cow position: | chr25:427293-427503 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 11, 0 |
Show alignments to all cow chromosomes.