Cow genome map


           Conread name:
           Ss1.1-Spl1-SPL01F020054.5
        

               Conread position:
               475-620
               

               Cow position:
               chr8:17689782-17689640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               113
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               77, 41
               

               Conread position:
               478-615
               

               Cow position:
               chr8:24905549-24905682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               478-620
               

               Cow position:
               chr8:11927212-11927348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               138, 34
               

               Conread position:
               478-620
               

               Cow position:
               chr8:43153606-43153463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               138, 0
               

               Conread position:
               482-622
               

               Cow position:
               chr8:24980787-24980928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               134, 0
               

               Conread position:
               492-620
               

               Cow position:
               chr8:19997912-19997783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               23, 11
               

               Conread position:
               514-621
               

               Cow position:
               chr8:29262911-29263019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               90
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               10, 40
               
Show alignments to all cow chromosomes.