Cow genome map


           Conread name:
           Ss1.1-Spl1-SPL01F070066.5.5
        

               Conread position:
               49-190
               

               Cow position:
               chr3:5120753-5120609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               134-846
               

               Cow position:
               chr3:5120692-5119988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               724
               

               Alignm identity:
               560
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 43
               

               Conread position:
               224-791
               

               Cow position:
               chr3:75190048-75190615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               570
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               202, 206
               

               Conread position:
               248-757
               

               Cow position:
               chr3:27172191-27171682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               516
               

               Alignm identity:
               324
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               191, 66
               

               Conread position:
               260-685
               

               Cow position:
               chr3:79273976-79274386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               428
               

               Alignm identity:
               281
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               265, 39
               

               Conread position:
               281-757
               

               Cow position:
               chr3:43331702-43331226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               478
               

               Alignm identity:
               296
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               108, 116
               

               Conread position:
               292-699
               

               Cow position:
               chr3:76263438-76263836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               251
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               123, 90
               

               Conread position:
               394-757
               

               Cow position:
               chr3:8194544-8194181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               232
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               27, 115
               

               Conread position:
               442-757
               

               Cow position:
               chr3:16292228-16292542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               205
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               228, 0
               
Show alignments to all cow chromosomes.