Cow genome map
| Conread name: | Ss1.1-Spl1-SPL01G040079.5 |
| Conread position: | 1-290 |
| Cow position: | |
| Alignm length: | 299 |
| Alignm identity: | 205 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 158, 33 |
| Conread position: | 1-370 |
| Cow position: | |
| Alignm length: | 384 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 33 |
| Conread position: | 1-370 |
| Cow position: | |
| Alignm length: | 384 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 31 |
| Conread position: | 1-372 |
| Cow position: | |
| Alignm length: | 378 |
| Alignm identity: | 261 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 198, 33 |
| Conread position: | 1-382 |
| Cow position: | |
| Alignm length: | 391 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 241, 53 |
| Conread position: | 1-382 |
| Cow position: | |
| Alignm length: | 404 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 53 |
| Conread position: | 1-382 |
| Cow position: | |
| Alignm length: | 390 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 198, 48 |
| Conread position: | 1-382 |
| Cow position: | |
| Alignm length: | 392 |
| Alignm identity: | 266 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 49, 96 |
| Conread position: | 1-382 |
| Cow position: | |
| Alignm length: | 392 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 53 |
| Conread position: | 1-382 |
| Cow position: | |
| Alignm length: | 395 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 197, 53 |
| Conread position: | 1-382 |
| Cow position: | |
| Alignm length: | 389 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 198, 117 |
| Conread position: | 1-382 |
| Cow position: | |
| Alignm length: | 392 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 49 |
| Conread position: | 1-382 |
| Cow position: | |
| Alignm length: | 390 |
| Alignm identity: | 262 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 197, 51 |
| Conread position: | 1-382 |
| Cow position: | |
| Alignm length: | 394 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 34 |
| Conread position: | 1-382 |
| Cow position: | |
| Alignm length: | 394 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 53 |
| Conread position: | 1-389 |
| Cow position: | |
| Alignm length: | 399 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 53 |
| Conread position: | 2-360 |
| Cow position: | |
| Alignm length: | 381 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 184 |
| Conread position: | 2-373 |
| Cow position: | |
| Alignm length: | 383 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 34 |
| Conread position: | 2-381 |
| Cow position: | |
| Alignm length: | 387 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 32 |
| Conread position: | 2-382 |
| Cow position: | |
| Alignm length: | 394 |
| Alignm identity: | 237 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 109, 32 |
| Conread position: | 2-382 |
| Cow position: | |
| Alignm length: | 392 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 164 |
| Conread position: | 3-265 |
| Cow position: | |
| Alignm length: | 273 |
| Alignm identity: | 196 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 79, 51 |
| Conread position: | 3-351 |
| Cow position: | |
| Alignm length: | 361 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 31 |
| Conread position: | 3-370 |
| Cow position: | |
| Alignm length: | 372 |
| Alignm identity: | 255 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 195, 94 |
| Conread position: | 3-381 |
| Cow position: | |
| Alignm length: | 390 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 31 |
| Conread position: | 3-381 |
| Cow position: | |
| Alignm length: | 390 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 33 |
| Conread position: | 3-381 |
| Cow position: | |
| Alignm length: | 390 |
| Alignm identity: | 271 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 195, 31 |
| Conread position: | 3-381 |
| Cow position: | |
| Alignm length: | 385 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 84 |
| Conread position: | 3-381 |
| Cow position: | |
| Alignm length: | 390 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 31 |
| Conread position: | 3-381 |
| Cow position: | |
| Alignm length: | 393 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 33 |
| Conread position: | 3-381 |
| Cow position: | |
| Alignm length: | 387 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 33 |
| Conread position: | 3-381 |
| Cow position: | |
| Alignm length: | 390 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 31 |
| Conread position: | 3-382 |
| Cow position: | |
| Alignm length: | 391 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 51 |
| Conread position: | 3-382 |
| Cow position: | |
| Alignm length: | 392 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 143 |
| Conread position: | 3-382 |
| Cow position: | |
| Alignm length: | 391 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 33 |
| Conread position: | 3-382 |
| Cow position: | |
| Alignm length: | 393 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 88 |
| Conread position: | 4-380 |
| Cow position: | |
| Alignm length: | 390 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 110 |
| Conread position: | 6-144 |
| Cow position: | |
| Alignm length: | 139 |
| Alignm identity: | 104 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 6-239 |
| Cow position: | |
| Alignm length: | 236 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 193, 46 |
| Conread position: | 6-363 |
| Cow position: | |
| Alignm length: | 374 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 139 |
| Conread position: | 6-380 |
| Cow position: | |
| Alignm length: | 387 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 48 |
| Conread position: | 6-382 |
| Cow position: | |
| Alignm length: | 400 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 48 |
| Conread position: | 8-280 |
| Cow position: | |
| Alignm length: | 286 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 54, 90 |
| Conread position: | 8-382 |
| Cow position: | |
| Alignm length: | 387 |
| Alignm identity: | 258 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 77, 23 |
| Conread position: | 9-233 |
| Cow position: | |
| Alignm length: | 232 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 152, 45 |
| Conread position: | 9-351 |
| Cow position: | |
| Alignm length: | 356 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 96, 42 |
| Conread position: | 9-352 |
| Cow position: | |
| Alignm length: | 354 |
| Alignm identity: | 227 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 96, 45 |
| Conread position: | 9-353 |
| Cow position: | |
| Alignm length: | 347 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 189, 16 |
| Conread position: | 9-363 |
| Cow position: | |
| Alignm length: | 355 |
| Alignm identity: | 255 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 9-371 |
| Cow position: | |
| Alignm length: | 370 |
| Alignm identity: | 245 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 189, 16 |
| Conread position: | 9-373 |
| Cow position: | |
| Alignm length: | 376 |
| Alignm identity: | 248 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 101, 27 |
| Conread position: | 9-381 |
| Cow position: | |
| Alignm length: | 379 |
| Alignm identity: | 264 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 184, 14 |
| Conread position: | 9-381 |
| Cow position: | |
| Alignm length: | 384 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 27 |
| Conread position: | 9-381 |
| Cow position: | |
| Alignm length: | 377 |
| Alignm identity: | 256 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 122, 16 |
| Conread position: | 9-382 |
| Cow position: | |
| Alignm length: | 382 |
| Alignm identity: | 254 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 190, 27 |
| Conread position: | 9-382 |
| Cow position: | |
| Alignm length: | 382 |
| Alignm identity: | 263 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 84, 46 |
| Conread position: | 9-382 |
| Cow position: | |
| Alignm length: | 388 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 22 |
| Conread position: | 9-382 |
| Cow position: | |
| Alignm length: | 386 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 45 |
| Conread position: | 9-383 |
| Cow position: | |
| Alignm length: | 392 |
| Alignm identity: | 264 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 185, 85 |
| Conread position: | 10-381 |
| Cow position: | |
| Alignm length: | 383 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 102 |
| Conread position: | 10-390 |
| Cow position: | |
| Alignm length: | 394 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 57 |
| Conread position: | 11-382 |
| Cow position: | |
| Alignm length: | 378 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 22 |
| Conread position: | 11-382 |
| Cow position: | |
| Alignm length: | 384 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 43 |
| Conread position: | 12-390 |
| Cow position: | |
| Alignm length: | 390 |
| Alignm identity: | 259 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 20, 130 |
| Conread position: | 15-382 |
| Cow position: | |
| Alignm length: | 379 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 38 |
| Conread position: | 16-382 |
| Cow position: | |
| Alignm length: | 380 |
| Alignm identity: | 265 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 33, 81 |
| Conread position: | 20-307 |
| Cow position: | |
| Alignm length: | 298 |
| Alignm identity: | 210 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 176, 16 |
| Conread position: | 20-381 |
| Cow position: | |
| Alignm length: | 374 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 158 |
| Conread position: | 20-382 |
| Cow position: | |
| Alignm length: | 377 |
| Alignm identity: | 263 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 176, 35 |
| Conread position: | 23-381 |
| Cow position: | |
| Alignm length: | 370 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 90 |
| Conread position: | 23-381 |
| Cow position: | |
| Alignm length: | 370 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 90 |
| Conread position: | 24-376 |
| Cow position: | |
| Alignm length: | 361 |
| Alignm identity: | 249 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 171, 26 |
| Conread position: | 25-291 |
| Cow position: | |
| Alignm length: | 276 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 168, 30 |
| Conread position: | 28-384 |
| Cow position: | |
| Alignm length: | 376 |
| Alignm identity: | 246 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 105, 145 |
| Conread position: | 29-248 |
| Cow position: | |
| Alignm length: | 224 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 18, 50 |
| Conread position: | 31-382 |
| Cow position: | |
| Alignm length: | 366 |
| Alignm identity: | 249 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 69, 110 |
| Conread position: | 37-382 |
| Cow position: | |
| Alignm length: | 353 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 129 |
| Conread position: | 38-382 |
| Cow position: | |
| Alignm length: | 354 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 28 |
| Conread position: | 39-382 |
| Cow position: | |
| Alignm length: | 356 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 136 |
| Conread position: | 39-382 |
| Cow position: | |
| Alignm length: | 357 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 137 |
| Conread position: | 45-285 |
| Cow position: | |
| Alignm length: | 248 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 90, 82 |
| Conread position: | 55-370 |
| Cow position: | |
| Alignm length: | 332 |
| Alignm identity: | 231 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 147, 120 |
| Conread position: | 63-382 |
| Cow position: | |
| Alignm length: | 343 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 130, 107 |
| Conread position: | 65-382 |
| Cow position: | |
| Alignm length: | 321 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 21 |
| Conread position: | 67-386 |
| Cow position: | |
| Alignm length: | 340 |
| Alignm identity: | 237 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 19, 11 |
| Conread position: | 90-382 |
| Cow position: | |
| Alignm length: | 299 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 18 |
| Conread position: | 96-382 |
| Cow position: | |
| Alignm length: | 292 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 80 |
| Conread position: | 97-381 |
| Cow position: | |
| Alignm length: | 288 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 186, 79 |
| Conread position: | 98-378 |
| Cow position: | |
| Alignm length: | 292 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 97, 120 |
| Conread position: | 101-381 |
| Cow position: | |
| Alignm length: | 286 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 96, 65 |
| Conread position: | 101-384 |
| Cow position: | |
| Alignm length: | 293 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 7, 102 |
| Conread position: | 129-382 |
| Cow position: | |
| Alignm length: | 257 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 113, 10 |
| Conread position: | 147-418 |
| Cow position: | |
| Alignm length: | 289 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 52, 23 |
| Conread position: | 154-382 |
| Cow position: | |
| Alignm length: | 244 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 45, 21 |
| Conread position: | 175-349 |
| Cow position: | |
| Alignm length: | 184 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 181-367 |
| Cow position: | |
| Alignm length: | 193 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 21, 56 |
| Conread position: | 224-381 |
| Cow position: | |
| Alignm length: | 161 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 64, 17 |
| Conread position: | 224-382 |
| Cow position: | |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 58, 17 |
| Conread position: | 257-381 |
| Cow position: | |
| Alignm length: | 128 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 31, 0 |
Show alignments to all cow chromosomes.