Cow genome map
| Conread name: | Ss1.1-Spl1-SPL01G040079.5 |
| Conread position: | 1-259 |
| Cow position: | chr11:28064800-28065057 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 198, 33 |
| Conread position: | 1-341 |
| Cow position: | chr11:10869381-10869715 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 241 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 22, 80 |
| Conread position: | 1-355 |
| Cow position: | chr11:44156542-44156182 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 198, 53 |
| Conread position: | 1-369 |
| Cow position: | chr11:31861603-31861974 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 258 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 24, 166 |
| Conread position: | 1-369 |
| Cow position: | chr11:49558979-49558601 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 130 |
| Conread position: | 1-370 |
| Cow position: | chr11:41169990-41169615 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 32 |
| Conread position: | 1-377 |
| Cow position: | chr11:31926874-31927241 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 263 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 21, 59 |
| Conread position: | 1-381 |
| Cow position: | chr11:19101790-19101401 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 53 |
| Conread position: | 1-382 |
| Cow position: | chr11:4269697-4269309 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 198, 53 |
| Conread position: | 1-382 |
| Cow position: | chr11:12357710-12357319 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 53 |
| Conread position: | 1-382 |
| Cow position: | chr11:24394018-24394407 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 53 |
| Conread position: | 1-382 |
| Cow position: | chr11:26124221-26123838 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 36 |
| Conread position: | 1-382 |
| Cow position: | chr11:29667902-29667514 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 33 |
| Conread position: | 1-382 |
| Cow position: | chr11:38834730-38834350 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 53 |
| Conread position: | 1-382 |
| Cow position: | chr11:44582630-44582250 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 240, 53 |
| Conread position: | 1-382 |
| Cow position: | chr11:47759578-47759188 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 152 |
| Conread position: | 1-382 |
| Cow position: | chr11:53431353-53430950 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 284 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 41, 119 |
| Conread position: | 1-382 |
| Cow position: | chr11:58135099-58135486 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 197, 174 |
| Conread position: | 1-382 |
| Cow position: | chr11:71330296-71330687 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 167 |
| Conread position: | 1-384 |
| Cow position: | chr11:4063164-4062795 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 198, 50 |
| Conread position: | 1-384 |
| Cow position: | chr11:72310329-72309944 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 198, 53 |
| Conread position: | 1-385 |
| Cow position: | chr11:44252501-44252904 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 33 |
| Conread position: | 1-396 |
| Cow position: | chr11:43513927-43513528 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 53 |
| Conread position: | 2-381 |
| Cow position: | chr11:3493700-3494080 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 34 |
| Conread position: | 3-342 |
| Cow position: | chr11:28108844-28109191 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 33 |
| Conread position: | 3-369 |
| Cow position: | chr11:29613286-29612912 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 33 |
| Conread position: | 3-381 |
| Cow position: | chr11:17106978-17106591 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 163 |
| Conread position: | 3-381 |
| Cow position: | chr11:17546871-17547254 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 30 |
| Conread position: | 3-381 |
| Cow position: | chr11:19063365-19062981 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 31 |
| Conread position: | 3-381 |
| Cow position: | chr11:30252939-30253325 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 155 |
| Conread position: | 3-381 |
| Cow position: | chr11:32452534-32452919 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 51 |
| Conread position: | 3-381 |
| Cow position: | chr11:67845858-67845479 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 30 |
| Conread position: | 3-382 |
| Cow position: | chr11:4026900-4026516 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 33 |
| Conread position: | 3-382 |
| Cow position: | chr11:63654630-63654242 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 112 |
| Conread position: | 3-382 |
| Cow position: | chr11:67451201-67451585 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 202, 52 |
| Conread position: | 3-384 |
| Cow position: | chr11:44518158-44517770 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 31 |
| Conread position: | 3-433 |
| Cow position: | chr11:4034642-4034208 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 179 |
| Conread position: | 6-360 |
| Cow position: | chr11:81851999-81851657 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 241 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 189, 111 |
| Conread position: | 6-362 |
| Cow position: | chr11:39804449-39804799 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 20 |
| Conread position: | 6-382 |
| Cow position: | chr11:49553465-49553088 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 91 |
| Conread position: | 6-382 |
| Cow position: | chr11:66729805-66730178 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 28 |
| Conread position: | 7-320 |
| Cow position: | chr11:37476274-37475950 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 228 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 107, 153 |
| Conread position: | 7-382 |
| Cow position: | chr11:28391671-28392057 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 268 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 98, 165 |
| Conread position: | 9-242 |
| Cow position: | chr11:54484699-54484470 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 181, 46 |
| Conread position: | 9-302 |
| Cow position: | chr11:15898278-15897977 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 212 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 21, 14 |
| Conread position: | 9-310 |
| Cow position: | chr11:19071501-19071200 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 188, 51 |
| Conread position: | 9-340 |
| Cow position: | chr11:53682134-53682460 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 185, 41 |
| Conread position: | 9-363 |
| Cow position: | chr11:26564377-26564021 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 249 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 40, 100 |
| Conread position: | 9-366 |
| Cow position: | chr11:31539847-31540204 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 190, 16 |
| Conread position: | 9-373 |
| Cow position: | chr11:75554273-75553915 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 251 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 177, 45 |
| Conread position: | 9-381 |
| Cow position: | chr11:18887570-18887928 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 259 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 100, 24 |
| Conread position: | 9-381 |
| Cow position: | chr11:28053901-28053550 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 272 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 101, 27 |
| Conread position: | 9-382 |
| Cow position: | chr11:1489433-1489076 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 259 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 31, 71 |
| Conread position: | 9-382 |
| Cow position: | chr11:14728332-14727963 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 44 |
| Conread position: | 9-382 |
| Cow position: | chr11:23880742-23881123 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 25 |
| Conread position: | 9-382 |
| Cow position: | chr11:28229053-28228676 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 27 |
| Conread position: | 9-382 |
| Cow position: | chr11:30123132-30122753 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 75 |
| Conread position: | 9-382 |
| Cow position: | chr11:32685609-32685981 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 250 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 98, 28 |
| Conread position: | 9-382 |
| Cow position: | chr11:52420111-52420495 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 371 |
| Conread position: | 9-383 |
| Cow position: | chr11:15943631-15943271 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 244 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 184, 42 |
| Conread position: | 9-383 |
| Cow position: | chr11:45921898-45921514 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 263 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 13, 18 |
| Conread position: | 9-384 |
| Cow position: | chr11:42311728-42311350 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 262 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 106, 45 |
| Conread position: | 9-385 |
| Cow position: | chr11:80473553-80473184 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 251 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 190, 27 |
| Conread position: | 9-438 |
| Cow position: | chr11:9224836-9224400 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 303 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 76, 16 |
| Conread position: | 10-377 |
| Cow position: | chr11:21890264-21889904 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 239 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 165, 87 |
| Conread position: | 10-382 |
| Cow position: | chr11:9205119-9204748 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 255 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 24, 57 |
| Conread position: | 10-382 |
| Cow position: | chr11:10848165-10848544 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 23 |
| Conread position: | 11-334 |
| Cow position: | chr11:66438410-66438089 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 19, 11 |
| Conread position: | 11-383 |
| Cow position: | chr11:29232299-29231926 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 249 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 175, 51 |
| Conread position: | 12-230 |
| Cow position: | chr11:31873902-31873690 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 123, 39 |
| Conread position: | 16-381 |
| Cow position: | chr11:11988852-11989225 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 110 |
| Conread position: | 16-382 |
| Cow position: | chr11:26548237-26548617 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 62 |
| Conread position: | 18-381 |
| Cow position: | chr11:57627333-57626961 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 148 |
| Conread position: | 18-382 |
| Cow position: | chr11:9601595-9601235 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 151 |
| Conread position: | 18-382 |
| Cow position: | chr11:9733959-9733585 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 149 |
| Conread position: | 18-382 |
| Cow position: | chr11:20733516-20733146 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 139 |
| Conread position: | 18-382 |
| Cow position: | chr11:26070317-26069954 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 267 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 55, 33 |
| Conread position: | 18-382 |
| Cow position: | chr11:73134010-73134382 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 16 |
| Conread position: | 20-370 |
| Cow position: | chr11:74424318-74424677 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 145 |
| Conread position: | 21-377 |
| Cow position: | chr11:53286451-53286080 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 32 |
| Conread position: | 23-382 |
| Cow position: | chr11:9156425-9156059 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 11 |
| Conread position: | 23-389 |
| Cow position: | chr11:20505954-20506339 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 125 |
| Conread position: | 23-389 |
| Cow position: | chr11:20511330-20511715 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 125 |
| Conread position: | 26-361 |
| Cow position: | chr11:76373259-76372925 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 133 |
| Conread position: | 28-382 |
| Cow position: | chr11:13065236-13064893 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 25, 114 |
| Conread position: | 37-377 |
| Cow position: | chr11:87142321-87142667 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 33 |
| Conread position: | 41-382 |
| Cow position: | chr11:3855964-3856304 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 136 |
| Conread position: | 41-382 |
| Cow position: | chr11:40775254-40774906 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 116 |
| Conread position: | 43-363 |
| Cow position: | chr11:2727481-2727806 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 218 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 115, 135 |
| Conread position: | 55-195 |
| Cow position: | chr11:27657061-27657200 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 70-351 |
| Cow position: | chr11:42522691-42522405 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 40, 44 |
| Conread position: | 79-265 |
| Cow position: | chr11:44490833-44490649 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 120, 52 |
| Conread position: | 79-362 |
| Cow position: | chr11:4056707-4056427 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 214 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 162, 48 |
| Conread position: | 79-390 |
| Cow position: | chr11:87135556-87135863 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 215 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 5, 87 |
| Conread position: | 96-382 |
| Cow position: | chr11:50042338-50042057 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 33, 122 |
| Conread position: | 97-382 |
| Cow position: | chr11:21899044-21898752 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 54 |
| Conread position: | 97-382 |
| Cow position: | chr11:42363548-42363842 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 125, 69 |
| Conread position: | 98-381 |
| Cow position: | chr11:26074166-26073875 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 15, 49 |
| Conread position: | 98-381 |
| Cow position: | chr11:61400278-61399990 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 211 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 101, 79 |
| Conread position: | 99-265 |
| Cow position: | chr11:31755168-31755000 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 23, 79 |
| Conread position: | 99-280 |
| Cow position: | chr11:32983026-32982838 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 96, 67 |
| Conread position: | 100-378 |
| Cow position: | chr11:33977655-33977359 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 20, 67 |
| Conread position: | 103-374 |
| Cow position: | chr11:60823232-60823494 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 139, 83 |
| Conread position: | 106-285 |
| Cow position: | chr11:15985628-15985816 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 25, 62 |
| Conread position: | 113-357 |
| Cow position: | chr11:9215957-9215711 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 177 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 83, 62 |
| Conread position: | 119-383 |
| Cow position: | chr11:36923372-36923108 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 76, 49 |
| Conread position: | 149-382 |
| Cow position: | chr11:1495180-1494942 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 50, 28 |
| Conread position: | 158-381 |
| Cow position: | chr11:67154547-67154777 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 171-384 |
| Cow position: | chr11:18070066-18069851 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 27, 66 |
| Conread position: | 177-382 |
| Cow position: | chr11:54216381-54216166 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 17, 202 |
| Conread position: | 178-382 |
| Cow position: | chr11:26784138-26784348 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 24, 192 |
| Conread position: | 200-388 |
| Cow position: | chr11:27657348-27657531 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 41, 63 |
| Conread position: | 224-382 |
| Cow position: | chr11:31754465-31754624 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 56, 19 |
| Conread position: | 227-365 |
| Cow position: | chr11:7117358-7117495 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 113, 14 |
| Conread position: | 227-383 |
| Cow position: | chr11:54484341-54484184 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 52, 14 |
| Conread position: | 238-382 |
| Cow position: | chr11:85210771-85210624 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 243-389 |
| Cow position: | chr11:46779895-46779748 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 252-378 |
| Cow position: | chr11:26146240-26146116 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 25, 105 |
| Conread position: | 257-389 |
| Cow position: | chr11:44489638-44489508 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 260-389 |
| Cow position: | chr11:2833296-2833427 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 22, 108 |
Show alignments to all cow chromosomes.