Cow genome map
| Conread name: | Ss1.1-Spl1-SPL01G040079.5 |
| Conread position: | 1-166 |
| Cow position: | |
| Alignm length: | 166 |
| Alignm identity: | 120 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 1-172 |
| Cow position: | |
| Alignm length: | 172 |
| Alignm identity: | 123 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 1-172 |
| Cow position: | |
| Alignm length: | 173 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 119, 35 |
| Conread position: | 1-233 |
| Cow position: | |
| Alignm length: | 236 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 196, 34 |
| Conread position: | 1-248 |
| Cow position: | |
| Alignm length: | 254 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 110, 53 |
| Conread position: | 1-340 |
| Cow position: | |
| Alignm length: | 348 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 180 |
| Conread position: | 1-365 |
| Cow position: | |
| Alignm length: | 373 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 197, 50 |
| Conread position: | 1-370 |
| Cow position: | |
| Alignm length: | 376 |
| Alignm identity: | 254 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 107, 25 |
| Conread position: | 1-376 |
| Cow position: | |
| Alignm length: | 387 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 25 |
| Conread position: | 1-381 |
| Cow position: | |
| Alignm length: | 389 |
| Alignm identity: | 272 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 198, 53 |
| Conread position: | 1-382 |
| Cow position: | |
| Alignm length: | 400 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 35 |
| Conread position: | 1-382 |
| Cow position: | |
| Alignm length: | 398 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 148 |
| Conread position: | 1-382 |
| Cow position: | |
| Alignm length: | 393 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 48 |
| Conread position: | 1-382 |
| Cow position: | |
| Alignm length: | 394 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 53 |
| Conread position: | 1-382 |
| Cow position: | |
| Alignm length: | 392 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 53 |
| Conread position: | 1-382 |
| Cow position: | |
| Alignm length: | 410 |
| Alignm identity: | 283 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 19, 115 |
| Conread position: | 1-382 |
| Cow position: | |
| Alignm length: | 392 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 33 |
| Conread position: | 1-382 |
| Cow position: | |
| Alignm length: | 397 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 121 |
| Conread position: | 1-382 |
| Cow position: | |
| Alignm length: | 403 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 113 |
| Conread position: | 1-383 |
| Cow position: | |
| Alignm length: | 393 |
| Alignm identity: | 240 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 194, 34 |
| Conread position: | 1-428 |
| Cow position: | |
| Alignm length: | 440 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 34 |
| Conread position: | 3-248 |
| Cow position: | |
| Alignm length: | 250 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 121, 33 |
| Conread position: | 3-311 |
| Cow position: | |
| Alignm length: | 320 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 193, 84 |
| Conread position: | 3-350 |
| Cow position: | |
| Alignm length: | 355 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 163 |
| Conread position: | 3-366 |
| Cow position: | |
| Alignm length: | 379 |
| Alignm identity: | 260 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 193, 33 |
| Conread position: | 3-372 |
| Cow position: | |
| Alignm length: | 381 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 174 |
| Conread position: | 3-381 |
| Cow position: | |
| Alignm length: | 391 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 34 |
| Conread position: | 3-381 |
| Cow position: | |
| Alignm length: | 390 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 33 |
| Conread position: | 3-382 |
| Cow position: | |
| Alignm length: | 391 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 33 |
| Conread position: | 3-382 |
| Cow position: | |
| Alignm length: | 391 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 33 |
| Conread position: | 3-382 |
| Cow position: | |
| Alignm length: | 383 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 31 |
| Conread position: | 6-243 |
| Cow position: | |
| Alignm length: | 243 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 23, 100 |
| Conread position: | 6-259 |
| Cow position: | |
| Alignm length: | 259 |
| Alignm identity: | 184 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 15, 44 |
| Conread position: | 6-377 |
| Cow position: | |
| Alignm length: | 380 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 20 |
| Conread position: | 6-382 |
| Cow position: | |
| Alignm length: | 388 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 153 |
| Conread position: | 6-382 |
| Cow position: | |
| Alignm length: | 388 |
| Alignm identity: | 258 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 63, 117 |
| Conread position: | 6-382 |
| Cow position: | |
| Alignm length: | 385 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 44 |
| Conread position: | 6-382 |
| Cow position: | |
| Alignm length: | 390 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 171 |
| Conread position: | 6-384 |
| Cow position: | |
| Alignm length: | 390 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 27 |
| Conread position: | 9-238 |
| Cow position: | |
| Alignm length: | 238 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 98, 26 |
| Conread position: | 9-346 |
| Cow position: | |
| Alignm length: | 349 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 164 |
| Conread position: | 9-352 |
| Cow position: | |
| Alignm length: | 355 |
| Alignm identity: | 245 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 187, 28 |
| Conread position: | 9-360 |
| Cow position: | |
| Alignm length: | 370 |
| Alignm identity: | 248 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 30, 70 |
| Conread position: | 9-371 |
| Cow position: | |
| Alignm length: | 381 |
| Alignm identity: | 270 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 190, 128 |
| Conread position: | 9-381 |
| Cow position: | |
| Alignm length: | 384 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 27 |
| Conread position: | 9-381 |
| Cow position: | |
| Alignm length: | 384 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 24 |
| Conread position: | 9-381 |
| Cow position: | |
| Alignm length: | 377 |
| Alignm identity: | 254 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 58, 28 |
| Conread position: | 9-382 |
| Cow position: | |
| Alignm length: | 382 |
| Alignm identity: | 252 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 189, 28 |
| Conread position: | 9-382 |
| Cow position: | |
| Alignm length: | 399 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 17 |
| Conread position: | 9-382 |
| Cow position: | |
| Alignm length: | 401 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 159 |
| Conread position: | 9-382 |
| Cow position: | |
| Alignm length: | 377 |
| Alignm identity: | 264 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 41, 102 |
| Conread position: | 9-382 |
| Cow position: | |
| Alignm length: | 383 |
| Alignm identity: | 264 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 190, 51 |
| Conread position: | 9-383 |
| Cow position: | |
| Alignm length: | 388 |
| Alignm identity: | 252 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 185, 48 |
| Conread position: | 9-383 |
| Cow position: | |
| Alignm length: | 388 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 46 |
| Conread position: | 9-386 |
| Cow position: | |
| Alignm length: | 393 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 170 |
| Conread position: | 9-388 |
| Cow position: | |
| Alignm length: | 393 |
| Alignm identity: | 254 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 180, 45 |
| Conread position: | 10-388 |
| Cow position: | |
| Alignm length: | 387 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 39 |
| Conread position: | 11-280 |
| Cow position: | |
| Alignm length: | 275 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 14, 153 |
| Conread position: | 11-371 |
| Cow position: | |
| Alignm length: | 364 |
| Alignm identity: | 249 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 184, 24 |
| Conread position: | 11-382 |
| Cow position: | |
| Alignm length: | 377 |
| Alignm identity: | 243 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 143, 43 |
| Conread position: | 11-382 |
| Cow position: | |
| Alignm length: | 383 |
| Alignm identity: | 249 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 11, 96 |
| Conread position: | 12-377 |
| Cow position: | |
| Alignm length: | 372 |
| Alignm identity: | 241 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 96, 42 |
| Conread position: | 12-382 |
| Cow position: | |
| Alignm length: | 376 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 101 |
| Conread position: | 12-390 |
| Cow position: | |
| Alignm length: | 397 |
| Alignm identity: | 263 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 5, 111 |
| Conread position: | 16-382 |
| Cow position: | |
| Alignm length: | 378 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 202, 38 |
| Conread position: | 17-382 |
| Cow position: | |
| Alignm length: | 378 |
| Alignm identity: | 256 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 32, 161 |
| Conread position: | 18-258 |
| Cow position: | |
| Alignm length: | 246 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 32, 65 |
| Conread position: | 18-389 |
| Cow position: | |
| Alignm length: | 382 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 148 |
| Conread position: | 21-382 |
| Cow position: | |
| Alignm length: | 367 |
| Alignm identity: | 240 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 11, 149 |
| Conread position: | 24-384 |
| Cow position: | |
| Alignm length: | 374 |
| Alignm identity: | 263 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 175, 31 |
| Conread position: | 27-370 |
| Cow position: | |
| Alignm length: | 348 |
| Alignm identity: | 226 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 81, 98 |
| Conread position: | 27-377 |
| Cow position: | |
| Alignm length: | 358 |
| Alignm identity: | 251 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 93, 60 |
| Conread position: | 27-382 |
| Cow position: | |
| Alignm length: | 368 |
| Alignm identity: | 254 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 58, 36 |
| Conread position: | 28-382 |
| Cow position: | |
| Alignm length: | 366 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 23 |
| Conread position: | 29-285 |
| Cow position: | |
| Alignm length: | 261 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 166, 105 |
| Conread position: | 29-382 |
| Cow position: | |
| Alignm length: | 366 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 97 |
| Conread position: | 29-382 |
| Cow position: | |
| Alignm length: | 367 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 7 |
| Conread position: | 41-371 |
| Cow position: | |
| Alignm length: | 336 |
| Alignm identity: | 228 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 241, 77 |
| Conread position: | 48-377 |
| Cow position: | |
| Alignm length: | 335 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 231, 87 |
| Conread position: | 55-382 |
| Cow position: | |
| Alignm length: | 337 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 139, 105 |
| Conread position: | 62-385 |
| Cow position: | |
| Alignm length: | 331 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 136, 11 |
| Conread position: | 63-362 |
| Cow position: | |
| Alignm length: | 308 |
| Alignm identity: | 225 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 19, 6 |
| Conread position: | 80-370 |
| Cow position: | |
| Alignm length: | 305 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 96 |
| Conread position: | 81-382 |
| Cow position: | |
| Alignm length: | 314 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 97 |
| Conread position: | 92-384 |
| Cow position: | |
| Alignm length: | 305 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 30, 84 |
| Conread position: | 96-360 |
| Cow position: | |
| Alignm length: | 272 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 33, 28 |
| Conread position: | 96-382 |
| Cow position: | |
| Alignm length: | 299 |
| Alignm identity: | 218 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 55, 26 |
| Conread position: | 97-382 |
| Cow position: | |
| Alignm length: | 296 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 17, 13 |
| Conread position: | 98-381 |
| Cow position: | |
| Alignm length: | 295 |
| Alignm identity: | 214 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 100, 79 |
| Conread position: | 98-381 |
| Cow position: | |
| Alignm length: | 295 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 79 |
| Conread position: | 98-382 |
| Cow position: | |
| Alignm length: | 287 |
| Alignm identity: | 185 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 93, 8 |
| Conread position: | 98-382 |
| Cow position: | |
| Alignm length: | 295 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 44, 15 |
| Conread position: | 98-384 |
| Cow position: | |
| Alignm length: | 295 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 52 |
| Conread position: | 101-275 |
| Cow position: | |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 89, 65 |
| Conread position: | 136-381 |
| Cow position: | |
| Alignm length: | 251 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 63, 41 |
| Conread position: | 149-369 |
| Cow position: | |
| Alignm length: | 228 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 45, 26 |
| Conread position: | 150-382 |
| Cow position: | |
| Alignm length: | 237 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 48, 134 |
| Conread position: | 158-382 |
| Cow position: | |
| Alignm length: | 233 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 40, 180 |
| Conread position: | 162-382 |
| Cow position: | |
| Alignm length: | 228 |
| Alignm identity: | 171 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 37, 64 |
| Conread position: | 171-382 |
| Cow position: | |
| Alignm length: | 221 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 26, 45 |
| Conread position: | 175-370 |
| Cow position: | |
| Alignm length: | 211 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 176-349 |
| Cow position: | |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 177-382 |
| Cow position: | |
| Alignm length: | 216 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 19, 31 |
| Conread position: | 200-384 |
| Cow position: | |
| Alignm length: | 194 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 41, 19 |
| Conread position: | 224-382 |
| Cow position: | |
| Alignm length: | 159 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 224-386 |
| Cow position: | |
| Alignm length: | 163 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 224-386 |
| Cow position: | |
| Alignm length: | 163 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 250-381 |
| Cow position: | |
| Alignm length: | 135 |
| Alignm identity: | 105 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 38, 121 |
Show alignments to all cow chromosomes.