Cow genome map

Conread name: Ss1.1-Spl1-SPL01G040079.5

Conread position: 1-195
Cow position:
Alignm length: 195
Alignm identity: 136
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 1-272
Cow position:
Alignm length: 278
Alignm identity: 193
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 109, 53

Conread position: 1-272
Cow position:
Alignm length: 273
Alignm identity: 184
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 169, 33

Conread position: 1-332
Cow position:
Alignm length: 343
Alignm identity: 234
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 198, 130

Conread position: 1-351
Cow position:
Alignm length: 364
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 49

Conread position: 1-363
Cow position:
Alignm length: 389
Alignm identity: 267
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 19, 0

Conread position: 1-363
Cow position:
Alignm length: 378
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 125

Conread position: 1-365
Cow position:
Alignm length: 374
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 32

Conread position: 1-382
Cow position:
Alignm length: 404
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 32

Conread position: 1-382
Cow position:
Alignm length: 389
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 50

Conread position: 1-382
Cow position:
Alignm length: 393
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 23

Conread position: 1-382
Cow position:
Alignm length: 407
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 49

Conread position: 1-382
Cow position:
Alignm length: 399
Alignm identity: 280
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 21, 143

Conread position: 1-382
Cow position:
Alignm length: 392
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 71

Conread position: 1-382
Cow position:
Alignm length: 393
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 147

Conread position: 1-382
Cow position:
Alignm length: 389
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 53

Conread position: 1-382
Cow position:
Alignm length: 393
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 33

Conread position: 1-382
Cow position:
Alignm length: 393
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 34

Conread position: 1-382
Cow position:
Alignm length: 403
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 175

Conread position: 1-382
Cow position:
Alignm length: 394
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 166

Conread position: 1-382
Cow position:
Alignm length: 394
Alignm identity: 274
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 198, 53

Conread position: 1-382
Cow position:
Alignm length: 394
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 118

Conread position: 1-382
Cow position:
Alignm length: 386
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 53

Conread position: 1-382
Cow position:
Alignm length: 391
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 33

Conread position: 1-389
Cow position:
Alignm length: 397
Alignm identity: 264
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 198, 32

Conread position: 1-389
Cow position:
Alignm length: 399
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 53

Conread position: 1-389
Cow position:
Alignm length: 396
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 48

Conread position: 1-389
Cow position:
Alignm length: 394
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 34

Conread position: 1-418
Cow position:
Alignm length: 442
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 22

Conread position: 2-351
Cow position:
Alignm length: 359
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 52

Conread position: 2-381
Cow position:
Alignm length: 392
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 34

Conread position: 3-355
Cow position:
Alignm length: 361
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 33

Conread position: 3-362
Cow position:
Alignm length: 366
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 49

Conread position: 3-381
Cow position:
Alignm length: 390
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 31

Conread position: 3-381
Cow position:
Alignm length: 390
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 51

Conread position: 3-381
Cow position:
Alignm length: 384
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 33

Conread position: 3-382
Cow position:
Alignm length: 392
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 101

Conread position: 3-382
Cow position:
Alignm length: 393
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 33

Conread position: 3-382
Cow position:
Alignm length: 385
Alignm identity: 221
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 30, 245

Conread position: 3-382
Cow position:
Alignm length: 393
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 164

Conread position: 3-382
Cow position:
Alignm length: 391
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 107

Conread position: 4-382
Cow position:
Alignm length: 398
Alignm identity: 258
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 24, 50

Conread position: 6-230
Cow position:
Alignm length: 227
Alignm identity: 155
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 189, 28

Conread position: 6-382
Cow position:
Alignm length: 391
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 97

Conread position: 6-382
Cow position:
Alignm length: 383
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 19

Conread position: 6-382
Cow position:
Alignm length: 389
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 65

Conread position: 6-383
Cow position:
Alignm length: 389
Alignm identity: 267
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 43, 61

Conread position: 6-389
Cow position:
Alignm length: 395
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 105

Conread position: 6-389
Cow position:
Alignm length: 394
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 28

Conread position: 9-230
Cow position:
Alignm length: 227
Alignm identity: 156
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 98, 24

Conread position: 9-307
Cow position:
Alignm length: 308
Alignm identity: 210
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 78, 16

Conread position: 9-347
Cow position:
Alignm length: 350
Alignm identity: 236
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 187, 27

Conread position: 9-363
Cow position:
Alignm length: 363
Alignm identity: 248
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 101, 17

Conread position: 9-371
Cow position:
Alignm length: 370
Alignm identity: 250
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 184, 211

Conread position: 9-381
Cow position:
Alignm length: 388
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 45

Conread position: 9-382
Cow position:
Alignm length: 391
Alignm identity: 266
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 30, 86

Conread position: 9-382
Cow position:
Alignm length: 386
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 85

Conread position: 9-382
Cow position:
Alignm length: 393
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 45

Conread position: 9-384
Cow position:
Alignm length: 389
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 155

Conread position: 10-195
Cow position:
Alignm length: 186
Alignm identity: 134
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 27, 0

Conread position: 10-382
Cow position:
Alignm length: 383
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 72

Conread position: 10-382
Cow position:
Alignm length: 384
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 24

Conread position: 10-383
Cow position:
Alignm length: 384
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 47

Conread position: 10-393
Cow position:
Alignm length: 394
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 106

Conread position: 11-255
Cow position:
Alignm length: 249
Alignm identity: 168
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 71, 39

Conread position: 11-382
Cow position:
Alignm length: 387
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 43

Conread position: 14-370
Cow position:
Alignm length: 363
Alignm identity: 252
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 96, 40

Conread position: 16-381
Cow position:
Alignm length: 369
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 34

Conread position: 17-383
Cow position:
Alignm length: 382
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 80

Conread position: 21-382
Cow position:
Alignm length: 388
Alignm identity: 267
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 28, 93

Conread position: 23-290
Cow position:
Alignm length: 275
Alignm identity: 186
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 94, 31

Conread position: 28-340
Cow position:
Alignm length: 327
Alignm identity: 217
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 22, 153

Conread position: 29-359
Cow position:
Alignm length: 339
Alignm identity: 226
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 27, 142

Conread position: 29-377
Cow position:
Alignm length: 357
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 150

Conread position: 30-382
Cow position:
Alignm length: 364
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 136

Conread position: 36-382
Cow position:
Alignm length: 363
Alignm identity: 235
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 103, 133

Conread position: 39-255
Cow position:
Alignm length: 222
Alignm identity: 159
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 51, 89

Conread position: 39-381
Cow position:
Alignm length: 354
Alignm identity: 243
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 92, 140

Conread position: 39-391
Cow position:
Alignm length: 366
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 121

Conread position: 40-370
Cow position:
Alignm length: 340
Alignm identity: 230
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 159, 135

Conread position: 40-382
Cow position:
Alignm length: 355
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 95

Conread position: 40-382
Cow position:
Alignm length: 355
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 18

Conread position: 41-379
Cow position:
Alignm length: 349
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 136

Conread position: 42-280
Cow position:
Alignm length: 244
Alignm identity: 164
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 149, 106

Conread position: 43-382
Cow position:
Alignm length: 352
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 24

Conread position: 44-382
Cow position:
Alignm length: 342
Alignm identity: 223
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 155, 34

Conread position: 44-382
Cow position:
Alignm length: 346
Alignm identity: 240
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 12, 49

Conread position: 44-382
Cow position:
Alignm length: 350
Alignm identity: 242
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 151, 54

Conread position: 55-382
Cow position:
Alignm length: 346
Alignm identity: 230
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 55, 117

Conread position: 62-290
Cow position:
Alignm length: 235
Alignm identity: 160
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 133, 70

Conread position: 62-383
Cow position:
Alignm length: 330
Alignm identity: 213
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 184, 13

Conread position: 65-382
Cow position:
Alignm length: 331
Alignm identity: 212
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 134, 93

Conread position: 79-382
Cow position:
Alignm length: 321
Alignm identity: 224
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 50, 105

Conread position: 89-382
Cow position:
Alignm length: 320
Alignm identity: 228
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 31, 77

Conread position: 91-336
Cow position:
Alignm length: 257
Alignm identity: 183
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 107, 86

Conread position: 92-391
Cow position:
Alignm length: 315
Alignm identity: 210
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 33, 56

Conread position: 95-382
Cow position:
Alignm length: 294
Alignm identity: 215
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 147, 54

Conread position: 99-389
Cow position:
Alignm length: 302
Alignm identity: 213
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 100, 19

Conread position: 106-349
Cow position:
Alignm length: 253
Alignm identity: 181
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 96, 63

Conread position: 118-382
Cow position:
Alignm length: 269
Alignm identity: 178
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 40, 28

Conread position: 121-382
Cow position:
Alignm length: 271
Alignm identity: 194
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 78, 55

Conread position: 129-348
Cow position:
Alignm length: 224
Alignm identity: 165
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 69, 48

Conread position: 129-377
Cow position:
Alignm length: 265
Alignm identity: 194
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 70, 46

Conread position: 134-382
Cow position:
Alignm length: 255
Alignm identity: 178
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 114, 15

Conread position: 138-382
Cow position:
Alignm length: 259
Alignm identity: 187
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 60, 37

Conread position: 149-382
Cow position:
Alignm length: 243
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 228

Conread position: 171-382
Cow position:
Alignm length: 222
Alignm identity: 165
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 25, 207

Conread position: 172-382
Cow position:
Alignm length: 229
Alignm identity: 164
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 27, 214

Conread position: 173-376
Cow position:
Alignm length: 214
Alignm identity: 154
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 45, 27

Conread position: 175-382
Cow position:
Alignm length: 222
Alignm identity: 157
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 21, 207

Conread position: 176-382
Cow position:
Alignm length: 218
Alignm identity: 163
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 63, 24

Conread position: 189-385
Cow position:
Alignm length: 210
Alignm identity: 153
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 10, 173

Conread position: 194-377
Cow position:
Alignm length: 188
Alignm identity: 134
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 7, 107

Conread position: 195-381
Cow position:
Alignm length: 192
Alignm identity: 144
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 47, 178

Conread position: 197-381
Cow position:
Alignm length: 194
Alignm identity: 140
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 45, 180

Conread position: 200-349
Cow position:
Alignm length: 156
Alignm identity: 123
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 41, 12

Conread position: 224-382
Cow position:
Alignm length: 162
Alignm identity: 122
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 62, 8

Conread position: 225-382
Cow position:
Alignm length: 161
Alignm identity: 120
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 57, 11

Conread position: 228-381
Cow position:
Alignm length: 160
Alignm identity: 121
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 40, 13

Conread position: 251-382
Cow position:
Alignm length: 137
Alignm identity: 104
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 46, 122

Conread position: 251-382
Cow position:
Alignm length: 133
Alignm identity: 104
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 39, 51

Show alignments to all cow chromosomes.