Cow genome map
| Conread name: | Ss1.1-Spl1-SPL01G040079.5 |
| Conread position: | 1-166 |
| Cow position: | |
| Alignm length: | 166 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 1-226 |
| Cow position: | |
| Alignm length: | 230 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 106, 54 |
| Conread position: | 1-242 |
| Cow position: | |
| Alignm length: | 247 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 85, 24 |
| Conread position: | 1-294 |
| Cow position: | |
| Alignm length: | 300 |
| Alignm identity: | 215 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 98, 35 |
| Conread position: | 1-345 |
| Cow position: | |
| Alignm length: | 357 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 174 |
| Conread position: | 1-382 |
| Cow position: | |
| Alignm length: | 392 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 198, 35 |
| Conread position: | 1-382 |
| Cow position: | |
| Alignm length: | 394 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 145 |
| Conread position: | 1-382 |
| Cow position: | |
| Alignm length: | 390 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 198, 22 |
| Conread position: | 1-382 |
| Cow position: | |
| Alignm length: | 397 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 198, 53 |
| Conread position: | 1-382 |
| Cow position: | |
| Alignm length: | 395 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 198, 141 |
| Conread position: | 1-382 |
| Cow position: | |
| Alignm length: | 391 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 50 |
| Conread position: | 1-382 |
| Cow position: | |
| Alignm length: | 392 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 50 |
| Conread position: | 1-382 |
| Cow position: | |
| Alignm length: | 397 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 49 |
| Conread position: | 1-382 |
| Cow position: | |
| Alignm length: | 389 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 125 |
| Conread position: | 1-382 |
| Cow position: | |
| Alignm length: | 395 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 198, 32 |
| Conread position: | 1-382 |
| Cow position: | |
| Alignm length: | 385 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 125 |
| Conread position: | 1-382 |
| Cow position: | |
| Alignm length: | 401 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 32 |
| Conread position: | 1-382 |
| Cow position: | |
| Alignm length: | 393 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 47 |
| Conread position: | 1-382 |
| Cow position: | |
| Alignm length: | 403 |
| Alignm identity: | 282 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 194, 34 |
| Conread position: | 1-382 |
| Cow position: | |
| Alignm length: | 393 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 156 |
| Conread position: | 1-382 |
| Cow position: | |
| Alignm length: | 395 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 168 |
| Conread position: | 1-382 |
| Cow position: | |
| Alignm length: | 393 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 118 |
| Conread position: | 1-382 |
| Cow position: | |
| Alignm length: | 403 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 33 |
| Conread position: | 1-383 |
| Cow position: | |
| Alignm length: | 391 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 53 |
| Conread position: | 1-384 |
| Cow position: | |
| Alignm length: | 393 |
| Alignm identity: | 265 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 108, 53 |
| Conread position: | 1-389 |
| Cow position: | |
| Alignm length: | 400 |
| Alignm identity: | 268 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 60, 53 |
| Conread position: | 1-389 |
| Cow position: | |
| Alignm length: | 405 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 198, 32 |
| Conread position: | 1-389 |
| Cow position: | |
| Alignm length: | 408 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 33 |
| Conread position: | 2-382 |
| Cow position: | |
| Alignm length: | 389 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 48 |
| Conread position: | 3-372 |
| Cow position: | |
| Alignm length: | 382 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 198, 30 |
| Conread position: | 3-381 |
| Cow position: | |
| Alignm length: | 390 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 51 |
| Conread position: | 3-381 |
| Cow position: | |
| Alignm length: | 390 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 33 |
| Conread position: | 3-381 |
| Cow position: | |
| Alignm length: | 390 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 33 |
| Conread position: | 3-381 |
| Cow position: | |
| Alignm length: | 386 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 31 |
| Conread position: | 6-226 |
| Cow position: | |
| Alignm length: | 227 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 17, 65 |
| Conread position: | 6-317 |
| Cow position: | |
| Alignm length: | 327 |
| Alignm identity: | 229 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 93, 32 |
| Conread position: | 6-380 |
| Cow position: | |
| Alignm length: | 382 |
| Alignm identity: | 263 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 229, 48 |
| Conread position: | 6-381 |
| Cow position: | |
| Alignm length: | 382 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 115 |
| Conread position: | 6-382 |
| Cow position: | |
| Alignm length: | 383 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 27 |
| Conread position: | 6-382 |
| Cow position: | |
| Alignm length: | 389 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 28 |
| Conread position: | 6-382 |
| Cow position: | |
| Alignm length: | 384 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 26 |
| Conread position: | 6-382 |
| Cow position: | |
| Alignm length: | 388 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 169 |
| Conread position: | 6-382 |
| Cow position: | |
| Alignm length: | 383 |
| Alignm identity: | 267 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 192, 51 |
| Conread position: | 6-382 |
| Cow position: | |
| Alignm length: | 398 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 160 |
| Conread position: | 6-411 |
| Cow position: | |
| Alignm length: | 422 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 27 |
| Conread position: | 9-359 |
| Cow position: | |
| Alignm length: | 353 |
| Alignm identity: | 238 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 189, 44 |
| Conread position: | 9-370 |
| Cow position: | |
| Alignm length: | 369 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 24 |
| Conread position: | 9-375 |
| Cow position: | |
| Alignm length: | 375 |
| Alignm identity: | 255 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 11, 44 |
| Conread position: | 9-381 |
| Cow position: | |
| Alignm length: | 384 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 84 |
| Conread position: | 9-381 |
| Cow position: | |
| Alignm length: | 396 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 41 |
| Conread position: | 9-381 |
| Cow position: | |
| Alignm length: | 381 |
| Alignm identity: | 241 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 174, 43 |
| Conread position: | 9-382 |
| Cow position: | |
| Alignm length: | 391 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 28 |
| Conread position: | 9-389 |
| Cow position: | |
| Alignm length: | 388 |
| Alignm identity: | 262 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 61, 28 |
| Conread position: | 9-433 |
| Cow position: | |
| Alignm length: | 452 |
| Alignm identity: | 292 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 75, 27 |
| Conread position: | 10-274 |
| Cow position: | |
| Alignm length: | 273 |
| Alignm identity: | 195 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 185, 44 |
| Conread position: | 10-411 |
| Cow position: | |
| Alignm length: | 422 |
| Alignm identity: | 284 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 185, 44 |
| Conread position: | 11-382 |
| Cow position: | |
| Alignm length: | 384 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 43 |
| Conread position: | 12-370 |
| Cow position: | |
| Alignm length: | 370 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 42 |
| Conread position: | 12-411 |
| Cow position: | |
| Alignm length: | 419 |
| Alignm identity: | 267 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 125, 10 |
| Conread position: | 14-381 |
| Cow position: | |
| Alignm length: | 384 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 20 |
| Conread position: | 15-382 |
| Cow position: | |
| Alignm length: | 377 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 21 |
| Conread position: | 18-384 |
| Cow position: | |
| Alignm length: | 368 |
| Alignm identity: | 248 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 173, 98 |
| Conread position: | 20-381 |
| Cow position: | |
| Alignm length: | 373 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 16 |
| Conread position: | 20-382 |
| Cow position: | |
| Alignm length: | 373 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 146 |
| Conread position: | 24-387 |
| Cow position: | |
| Alignm length: | 381 |
| Alignm identity: | 246 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 56, 13 |
| Conread position: | 25-378 |
| Cow position: | |
| Alignm length: | 367 |
| Alignm identity: | 230 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 92, 156 |
| Conread position: | 28-381 |
| Cow position: | |
| Alignm length: | 362 |
| Alignm identity: | 235 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 57, 64 |
| Conread position: | 28-382 |
| Cow position: | |
| Alignm length: | 359 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 121 |
| Conread position: | 29-342 |
| Cow position: | |
| Alignm length: | 317 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 246, 146 |
| Conread position: | 29-389 |
| Cow position: | |
| Alignm length: | 368 |
| Alignm identity: | 249 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 19, 131 |
| Conread position: | 30-349 |
| Cow position: | |
| Alignm length: | 328 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 165, 114 |
| Conread position: | 30-382 |
| Cow position: | |
| Alignm length: | 362 |
| Alignm identity: | 234 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 78, 36 |
| Conread position: | 37-382 |
| Cow position: | |
| Alignm length: | 363 |
| Alignm identity: | 253 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 86, 73 |
| Conread position: | 40-381 |
| Cow position: | |
| Alignm length: | 353 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 126 |
| Conread position: | 44-382 |
| Cow position: | |
| Alignm length: | 349 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 151, 14 |
| Conread position: | 55-382 |
| Cow position: | |
| Alignm length: | 344 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 40, 250 |
| Conread position: | 62-377 |
| Cow position: | |
| Alignm length: | 331 |
| Alignm identity: | 220 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 132, 66 |
| Conread position: | 79-384 |
| Cow position: | |
| Alignm length: | 324 |
| Alignm identity: | 233 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 5, 56 |
| Conread position: | 83-382 |
| Cow position: | |
| Alignm length: | 313 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 25, 169 |
| Conread position: | 97-382 |
| Cow position: | |
| Alignm length: | 295 |
| Alignm identity: | 217 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 11, 17 |
| Conread position: | 98-382 |
| Cow position: | |
| Alignm length: | 296 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 79 |
| Conread position: | 100-382 |
| Cow position: | |
| Alignm length: | 300 |
| Alignm identity: | 214 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 53, 35 |
| Conread position: | 103-382 |
| Cow position: | |
| Alignm length: | 293 |
| Alignm identity: | 215 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 92, 15 |
| Conread position: | 104-389 |
| Cow position: | |
| Alignm length: | 295 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 71 |
| Conread position: | 106-351 |
| Cow position: | |
| Alignm length: | 270 |
| Alignm identity: | 195 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 93, 23 |
| Conread position: | 120-381 |
| Cow position: | |
| Alignm length: | 273 |
| Alignm identity: | 198 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 10, 50 |
| Conread position: | 125-369 |
| Cow position: | |
| Alignm length: | 253 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 76, 31 |
| Conread position: | 153-382 |
| Cow position: | |
| Alignm length: | 242 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 45, 22 |
| Conread position: | 157-321 |
| Cow position: | |
| Alignm length: | 170 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 37, 18 |
| Conread position: | 171-386 |
| Cow position: | |
| Alignm length: | 227 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 27, 208 |
| Conread position: | 175-382 |
| Cow position: | |
| Alignm length: | 219 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 24, 204 |
| Conread position: | 177-382 |
| Cow position: | |
| Alignm length: | 211 |
| Alignm identity: | 169 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 17, 38 |
| Conread position: | 181-371 |
| Cow position: | |
| Alignm length: | 202 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 194-381 |
| Cow position: | |
| Alignm length: | 197 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 48, 183 |
| Conread position: | 201-355 |
| Cow position: | |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 215-377 |
| Cow position: | |
| Alignm length: | 169 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 26, 13 |
| Conread position: | 219-382 |
| Cow position: | |
| Alignm length: | 168 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 28, 153 |
| Conread position: | 228-382 |
| Cow position: | |
| Alignm length: | 155 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 228-389 |
| Cow position: | |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 54, 39 |
| Conread position: | 237-382 |
| Cow position: | |
| Alignm length: | 147 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 10, 27 |
| Conread position: | 251-381 |
| Cow position: | |
| Alignm length: | 131 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 90, 0 |
Show alignments to all cow chromosomes.