Cow genome map

Conread name: Ss1.1-Spl1-SPL01G040079.5

Conread position: 1-191
Cow position:
Alignm length: 194
Alignm identity: 134
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 20, 168

Conread position: 1-322
Cow position:
Alignm length: 337
Alignm identity: 239
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 29, 93

Conread position: 1-338
Cow position:
Alignm length: 347
Alignm identity: 239
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 41, 84

Conread position: 1-360
Cow position:
Alignm length: 362
Alignm identity: 236
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 162, 21

Conread position: 1-360
Cow position:
Alignm length: 374
Alignm identity: 254
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 36, 16

Conread position: 1-367
Cow position:
Alignm length: 376
Alignm identity: 256
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 36, 110

Conread position: 1-370
Cow position:
Alignm length: 377
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 55

Conread position: 1-372
Cow position:
Alignm length: 378
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 33

Conread position: 1-378
Cow position:
Alignm length: 392
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 172

Conread position: 1-382
Cow position:
Alignm length: 388
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 50

Conread position: 1-382
Cow position:
Alignm length: 385
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 49

Conread position: 1-382
Cow position:
Alignm length: 386
Alignm identity: 263
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 198, 53

Conread position: 1-382
Cow position:
Alignm length: 394
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 53

Conread position: 1-382
Cow position:
Alignm length: 395
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 33

Conread position: 1-382
Cow position:
Alignm length: 393
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 53

Conread position: 1-382
Cow position:
Alignm length: 396
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 117

Conread position: 1-382
Cow position:
Alignm length: 396
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 32

Conread position: 1-382
Cow position:
Alignm length: 390
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 32

Conread position: 1-382
Cow position:
Alignm length: 390
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 53

Conread position: 1-382
Cow position:
Alignm length: 391
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 33

Conread position: 1-382
Cow position:
Alignm length: 392
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 35

Conread position: 1-382
Cow position:
Alignm length: 395
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 112

Conread position: 1-382
Cow position:
Alignm length: 399
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 177

Conread position: 1-382
Cow position:
Alignm length: 405
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 123

Conread position: 1-382
Cow position:
Alignm length: 404
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 53

Conread position: 1-384
Cow position:
Alignm length: 397
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 53

Conread position: 1-411
Cow position:
Alignm length: 423
Alignm identity: 285
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 124, 50

Conread position: 2-233
Cow position:
Alignm length: 236
Alignm identity: 161
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 86, 23

Conread position: 2-280
Cow position:
Alignm length: 282
Alignm identity: 195
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 196, 175

Conread position: 2-381
Cow position:
Alignm length: 391
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 34

Conread position: 3-239
Cow position:
Alignm length: 239
Alignm identity: 163
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 193, 33

Conread position: 3-258
Cow position:
Alignm length: 259
Alignm identity: 181
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 193, 51

Conread position: 3-376
Cow position:
Alignm length: 387
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 33

Conread position: 3-377
Cow position:
Alignm length: 390
Alignm identity: 270
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 103, 49

Conread position: 3-380
Cow position:
Alignm length: 389
Alignm identity: 271
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 195, 33

Conread position: 3-381
Cow position:
Alignm length: 388
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 33

Conread position: 3-381
Cow position:
Alignm length: 390
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 32

Conread position: 3-381
Cow position:
Alignm length: 391
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 164

Conread position: 3-381
Cow position:
Alignm length: 391
Alignm identity: 264
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 81, 67

Conread position: 3-381
Cow position:
Alignm length: 391
Alignm identity: 273
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 47, 89

Conread position: 3-382
Cow position:
Alignm length: 383
Alignm identity: 266
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 125, 33

Conread position: 3-382
Cow position:
Alignm length: 392
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 33

Conread position: 3-382
Cow position:
Alignm length: 391
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 31

Conread position: 6-289
Cow position:
Alignm length: 294
Alignm identity: 199
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 135, 207

Conread position: 6-370
Cow position:
Alignm length: 374
Alignm identity: 249
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 188, 48

Conread position: 6-375
Cow position:
Alignm length: 374
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 27

Conread position: 6-381
Cow position:
Alignm length: 391
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 19

Conread position: 6-382
Cow position:
Alignm length: 395
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 30

Conread position: 6-382
Cow position:
Alignm length: 385
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 48

Conread position: 6-390
Cow position:
Alignm length: 400
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 110

Conread position: 9-207
Cow position:
Alignm length: 203
Alignm identity: 143
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 49, 137

Conread position: 9-260
Cow position:
Alignm length: 256
Alignm identity: 169
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 186, 16

Conread position: 9-336
Cow position:
Alignm length: 333
Alignm identity: 215
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 172, 25

Conread position: 9-337
Cow position:
Alignm length: 337
Alignm identity: 228
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 87, 45

Conread position: 9-370
Cow position:
Alignm length: 365
Alignm identity: 244
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 190, 44

Conread position: 9-380
Cow position:
Alignm length: 384
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 45

Conread position: 9-381
Cow position:
Alignm length: 384
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 157

Conread position: 9-381
Cow position:
Alignm length: 380
Alignm identity: 251
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 101, 27

Conread position: 9-382
Cow position:
Alignm length: 381
Alignm identity: 247
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 87, 97

Conread position: 9-382
Cow position:
Alignm length: 381
Alignm identity: 267
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 72, 16

Conread position: 9-382
Cow position:
Alignm length: 377
Alignm identity: 258
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 185, 16

Conread position: 9-382
Cow position:
Alignm length: 381
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 77

Conread position: 9-384
Cow position:
Alignm length: 390
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 110

Conread position: 9-385
Cow position:
Alignm length: 384
Alignm identity: 259
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 86, 16

Conread position: 9-389
Cow position:
Alignm length: 382
Alignm identity: 248
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 232, 28

Conread position: 9-411
Cow position:
Alignm length: 410
Alignm identity: 266
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 183, 25

Conread position: 10-384
Cow position:
Alignm length: 387
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 26

Conread position: 11-382
Cow position:
Alignm length: 380
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 14

Conread position: 11-382
Cow position:
Alignm length: 385
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 23

Conread position: 12-368
Cow position:
Alignm length: 361
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 11

Conread position: 12-382
Cow position:
Alignm length: 383
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 23

Conread position: 13-382
Cow position:
Alignm length: 390
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 163

Conread position: 14-384
Cow position:
Alignm length: 387
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 40

Conread position: 15-381
Cow position:
Alignm length: 380
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 10

Conread position: 17-384
Cow position:
Alignm length: 380
Alignm identity: 262
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 32, 72

Conread position: 18-247
Cow position:
Alignm length: 232
Alignm identity: 163
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 177, 7

Conread position: 18-357
Cow position:
Alignm length: 350
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 34

Conread position: 18-381
Cow position:
Alignm length: 375
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 68

Conread position: 18-382
Cow position:
Alignm length: 373
Alignm identity: 260
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 31, 79

Conread position: 20-325
Cow position:
Alignm length: 317
Alignm identity: 215
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 105, 16

Conread position: 20-382
Cow position:
Alignm length: 374
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 156

Conread position: 20-382
Cow position:
Alignm length: 372
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 146

Conread position: 20-382
Cow position:
Alignm length: 374
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 16

Conread position: 21-381
Cow position:
Alignm length: 376
Alignm identity: 256
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 59, 49

Conread position: 21-382
Cow position:
Alignm length: 369
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 145

Conread position: 24-367
Cow position:
Alignm length: 354
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 157

Conread position: 24-382
Cow position:
Alignm length: 369
Alignm identity: 253
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 171, 54

Conread position: 25-218
Cow position:
Alignm length: 196
Alignm identity: 139
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 171, 132

Conread position: 27-382
Cow position:
Alignm length: 368
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 44

Conread position: 27-382
Cow position:
Alignm length: 367
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 91

Conread position: 29-381
Cow position:
Alignm length: 365
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 7

Conread position: 37-378
Cow position:
Alignm length: 355
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 82

Conread position: 39-338
Cow position:
Alignm length: 309
Alignm identity: 215
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 71, 90

Conread position: 39-391
Cow position:
Alignm length: 361
Alignm identity: 244
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 154, 97

Conread position: 40-363
Cow position:
Alignm length: 329
Alignm identity: 231
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 43, 34

Conread position: 40-370
Cow position:
Alignm length: 343
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 46

Conread position: 43-381
Cow position:
Alignm length: 345
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 98

Conread position: 47-385
Cow position:
Alignm length: 349
Alignm identity: 233
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 88, 44

Conread position: 55-382
Cow position:
Alignm length: 336
Alignm identity: 223
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 113, 30

Conread position: 61-383
Cow position:
Alignm length: 331
Alignm identity: 211
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 47, 91

Conread position: 62-211
Cow position:
Alignm length: 152
Alignm identity: 117
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 135, 8

Conread position: 62-382
Cow position:
Alignm length: 329
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 100

Conread position: 74-382
Cow position:
Alignm length: 317
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 103

Conread position: 88-322
Cow position:
Alignm length: 240
Alignm identity: 166
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 109, 74

Conread position: 95-377
Cow position:
Alignm length: 291
Alignm identity: 199
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 100, 35

Conread position: 98-371
Cow position:
Alignm length: 286
Alignm identity: 208
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 97, 68

Conread position: 98-381
Cow position:
Alignm length: 301
Alignm identity: 218
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 101, 79

Conread position: 110-382
Cow position:
Alignm length: 284
Alignm identity: 207
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 88, 65

Conread position: 113-382
Cow position:
Alignm length: 280
Alignm identity: 202
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 83, 64

Conread position: 113-382
Cow position:
Alignm length: 274
Alignm identity: 195
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 86, 16

Conread position: 113-382
Cow position:
Alignm length: 278
Alignm identity: 184
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 84, 148

Conread position: 118-382
Cow position:
Alignm length: 277
Alignm identity: 204
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 12, 27

Conread position: 120-370
Cow position:
Alignm length: 262
Alignm identity: 189
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 24, 51

Conread position: 134-382
Cow position:
Alignm length: 262
Alignm identity: 187
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 43, 14

Conread position: 154-382
Cow position:
Alignm length: 243
Alignm identity: 172
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 88, 21

Conread position: 162-351
Cow position:
Alignm length: 201
Alignm identity: 149
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 37, 151

Conread position: 172-389
Cow position:
Alignm length: 225
Alignm identity: 173
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 27, 202

Conread position: 184-437
Cow position:
Alignm length: 272
Alignm identity: 197
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 14, 226

Conread position: 193-382
Cow position:
Alignm length: 195
Alignm identity: 142
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 49, 7

Conread position: 200-382
Cow position:
Alignm length: 190
Alignm identity: 139
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 48, 82

Conread position: 200-382
Cow position:
Alignm length: 190
Alignm identity: 141
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 42, 169

Conread position: 202-370
Cow position:
Alignm length: 172
Alignm identity: 130
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 76, 39

Conread position: 206-382
Cow position:
Alignm length: 183
Alignm identity: 133
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 41, 142

Conread position: 206-384
Cow position:
Alignm length: 184
Alignm identity: 143
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 35, 119

Conread position: 213-382
Cow position:
Alignm length: 181
Alignm identity: 140
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 10, 166

Conread position: 220-382
Cow position:
Alignm length: 166
Alignm identity: 124
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 62, 16

Conread position: 224-382
Cow position:
Alignm length: 159
Alignm identity: 121
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 228-389
Cow position:
Alignm length: 164
Alignm identity: 128
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 58, 22

Conread position: 240-384
Cow position:
Alignm length: 149
Alignm identity: 118
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 7, 0

Show alignments to all cow chromosomes.