Cow genome map
Conread name: | Ss1.1-Spl1-SPL01G040079.5 |
Conread position: | 1-166 |
Cow position: | chr23:16614443-16614282 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 125 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 50, 66 |
Conread position: | 1-184 |
Cow position: | chr23:8287021-8287204 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 136 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 19, 52 |
Conread position: | 1-221 |
Cow position: | chr23:4639632-4639416 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 156 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 195, 33 |
Conread position: | 1-352 |
Cow position: | chr23:5739365-5739009 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 195, 37 |
Conread position: | 1-366 |
Cow position: | chr23:1956889-1957242 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 198, 34 |
Conread position: | 1-374 |
Cow position: | chr23:38669876-38669499 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 249 |
Alignm E-value: | 9e-27 |
Alignm gaps (pig, cow): | 54, 153 |
Conread position: | 1-381 |
Cow position: | chr23:4889678-4890064 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 194, 33 |
Conread position: | 1-381 |
Cow position: | chr23:31649049-31648653 (view UCSC Genome Browser custom track) |
Alignm length: | 403 |
Alignm identity: | 283 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 50 |
Conread position: | 1-382 |
Cow position: | chr23:965502-965119 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 196, 50 |
Conread position: | 1-382 |
Cow position: | chr23:1012800-1012428 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 262 |
Alignm E-value: | 6e-34 |
Alignm gaps (pig, cow): | 221, 73 |
Conread position: | 1-382 |
Cow position: | chr23:2026088-2025705 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 185, 53 |
Conread position: | 1-382 |
Cow position: | chr23:2794263-2793882 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 198, 35 |
Conread position: | 1-382 |
Cow position: | chr23:4818013-4818402 (view UCSC Genome Browser custom track) |
Alignm length: | 393 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 198, 33 |
Conread position: | 1-382 |
Cow position: | chr23:11779777-11780158 (view UCSC Genome Browser custom track) |
Alignm length: | 393 |
Alignm identity: | 277 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 194, 53 |
Conread position: | 1-382 |
Cow position: | chr23:15178066-15178447 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 63 |
Conread position: | 1-382 |
Cow position: | chr23:19490529-19490930 (view UCSC Genome Browser custom track) |
Alignm length: | 404 |
Alignm identity: | 275 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 18, 180 |
Conread position: | 1-383 |
Cow position: | chr23:13512104-13512481 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 198, 32 |
Conread position: | 1-384 |
Cow position: | chr23:22167663-22168023 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 268 |
Alignm E-value: | 5.99756e-43 |
Alignm gaps (pig, cow): | 194, 62 |
Conread position: | 1-390 |
Cow position: | chr23:36030384-36029995 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 109, 33 |
Conread position: | 3-258 |
Cow position: | chr23:23171495-23171750 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 177 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 193, 33 |
Conread position: | 3-382 |
Cow position: | chr23:14923305-14922919 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 195, 33 |
Conread position: | 3-384 |
Cow position: | chr23:21243750-21243365 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 285 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 162 |
Conread position: | 3-411 |
Cow position: | chr23:4361018-4361435 (view UCSC Genome Browser custom track) |
Alignm length: | 424 |
Alignm identity: | 286 |
Alignm E-value: | 7.00649e-45 |
Alignm gaps (pig, cow): | 193, 33 |
Conread position: | 6-368 |
Cow position: | chr23:26159728-26159330 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 276 |
Alignm E-value: | 7e-35 |
Alignm gaps (pig, cow): | 20, 177 |
Conread position: | 6-371 |
Cow position: | chr23:16498240-16497869 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 191, 48 |
Conread position: | 6-382 |
Cow position: | chr23:2758886-2759276 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 188, 28 |
Conread position: | 6-382 |
Cow position: | chr23:5873581-5873197 (view UCSC Genome Browser custom track) |
Alignm length: | 389 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 45 |
Conread position: | 7-381 |
Cow position: | chr23:3707121-3707503 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 135, 27 |
Conread position: | 7-382 |
Cow position: | chr23:2576424-2576784 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 265 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 22, 45 |
Conread position: | 9-233 |
Cow position: | chr23:7369525-7369748 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 155 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 186, 41 |
Conread position: | 9-382 |
Cow position: | chr23:14262851-14263248 (view UCSC Genome Browser custom track) |
Alignm length: | 403 |
Alignm identity: | 268 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 62, 16 |
Conread position: | 9-382 |
Cow position: | chr23:14964045-14963675 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 233, 45 |
Conread position: | 9-382 |
Cow position: | chr23:15526570-15526952 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 283 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 121, 45 |
Conread position: | 9-382 |
Cow position: | chr23:30237268-30237648 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 16 |
Conread position: | 9-386 |
Cow position: | chr23:2342079-2342461 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 271 |
Alignm E-value: | 5.99756e-43 |
Alignm gaps (pig, cow): | 89, 14 |
Conread position: | 10-306 |
Cow position: | chr23:6220248-6220554 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 200 |
Alignm E-value: | 7e-25 |
Alignm gaps (pig, cow): | 21, 156 |
Conread position: | 10-370 |
Cow position: | chr23:1022961-1022592 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 161 |
Conread position: | 10-382 |
Cow position: | chr23:29402718-29402339 (view UCSC Genome Browser custom track) |
Alignm length: | 389 |
Alignm identity: | 267 |
Alignm E-value: | 4.00001e-41 |
Alignm gaps (pig, cow): | 185, 15 |
Conread position: | 11-382 |
Cow position: | chr23:14972978-14972594 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 158 |
Conread position: | 11-382 |
Cow position: | chr23:15876564-15876189 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 262 |
Alignm E-value: | 7.00649e-45 |
Alignm gaps (pig, cow): | 188, 26 |
Conread position: | 12-369 |
Cow position: | chr23:38581729-38582072 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 261 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 55, 23 |
Conread position: | 14-382 |
Cow position: | chr23:22146306-22145931 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 185, 40 |
Conread position: | 17-382 |
Cow position: | chr23:27400527-27400902 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 143 |
Conread position: | 20-372 |
Cow position: | chr23:781008-780657 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 241 |
Alignm E-value: | 4e-39 |
Alignm gaps (pig, cow): | 90, 14 |
Conread position: | 20-382 |
Cow position: | chr23:14777949-14777583 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 246 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 177, 89 |
Conread position: | 23-382 |
Cow position: | chr23:19949579-19949211 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 173, 143 |
Conread position: | 29-382 |
Cow position: | chr23:20155193-20154845 (view UCSC Genome Browser custom track) |
Alignm length: | 357 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 169, 100 |
Conread position: | 31-382 |
Cow position: | chr23:29451332-29450972 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 88 |
Conread position: | 40-381 |
Cow position: | chr23:41142201-41141853 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 158, 137 |
Conread position: | 40-382 |
Cow position: | chr23:25534347-25534667 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 230 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 80, 52 |
Conread position: | 40-382 |
Cow position: | chr23:28218447-28218800 (view UCSC Genome Browser custom track) |
Alignm length: | 355 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 130, 340 |
Conread position: | 40-384 |
Cow position: | chr23:618440-618095 (view UCSC Genome Browser custom track) |
Alignm length: | 352 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 155, 108 |
Conread position: | 42-382 |
Cow position: | chr23:3880054-3879711 (view UCSC Genome Browser custom track) |
Alignm length: | 350 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 68, 72 |
Conread position: | 89-362 |
Cow position: | chr23:23282307-23282587 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 211 |
Alignm E-value: | 7.00649e-45 |
Alignm gaps (pig, cow): | 110, 19 |
Conread position: | 95-382 |
Cow position: | chr23:11077103-11076805 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 212 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 27, 84 |
Conread position: | 97-382 |
Cow position: | chr23:21822195-21821915 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 193 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 13, 37 |
Conread position: | 104-389 |
Cow position: | chr23:37716597-37716887 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 201 |
Alignm E-value: | 8e-26 |
Alignm gaps (pig, cow): | 95, 22 |
Conread position: | 112-370 |
Cow position: | chr23:19451248-19451513 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 177 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 86, 63 |
Conread position: | 113-433 |
Cow position: | chr23:25682853-25682520 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 243 |
Alignm E-value: | 5.99756e-43 |
Alignm gaps (pig, cow): | 86, 63 |
Conread position: | 150-382 |
Cow position: | chr23:4513606-4513859 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 184 |
Alignm E-value: | 5e-32 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 154-382 |
Cow position: | chr23:11714728-11714491 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 173 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 44, 27 |
Conread position: | 158-365 |
Cow position: | chr23:16054925-16055144 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 171 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 41, 17 |
Conread position: | 162-382 |
Cow position: | chr23:2718461-2718688 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 163 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 40, 214 |
Conread position: | 175-381 |
Cow position: | chr23:16614013-16613799 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 160 |
Alignm E-value: | 6e-33 |
Alignm gaps (pig, cow): | 21, 202 |
Conread position: | 197-381 |
Cow position: | chr23:38691675-38691865 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 146 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 45, 166 |
Conread position: | 224-381 |
Cow position: | chr23:7314126-7314284 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 124 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 64, 17 |
Conread position: | 251-365 |
Cow position: | chr23:8287203-8287320 (view UCSC Genome Browser custom track) |
Alignm length: | 118 |
Alignm identity: | 93 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 31, 0 |
Show alignments to all cow chromosomes.