Cow genome map

Conread name: Ss1.1-Spl1-SPL01G040079.5

Conread position: 1-325
Cow position: chr25:34506649-34506320 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 205
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 194, 49

Conread position: 1-358
Cow position: chr25:11931738-11931383 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 48

Conread position: 1-382
Cow position: chr25:12941632-12941244 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 32

Conread position: 1-382
Cow position: chr25:17559511-17559136 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 87

Conread position: 1-382
Cow position: chr25:18888703-18888317 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 53

Conread position: 1-382
Cow position: chr25:20630670-20631051 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 80

Conread position: 1-382
Cow position: chr25:22148580-22148959 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 53

Conread position: 1-382
Cow position: chr25:25507741-25508133 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 50

Conread position: 1-390
Cow position: chr25:13782074-13782473 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 32

Conread position: 2-382
Cow position: chr25:32988216-32987830 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 248
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 196, 23

Conread position: 3-381
Cow position: chr25:17588514-17588130 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 51

Conread position: 3-382
Cow position: chr25:18177739-18178114 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 268
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 194, 31

Conread position: 3-382
Cow position: chr25:27021542-27021163 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 34

Conread position: 3-386
Cow position: chr25:18192721-18192329 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 34

Conread position: 4-383
Cow position: chr25:18182767-18183138 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 253
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 192, 33

Conread position: 6-382
Cow position: chr25:18273726-18273344 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 112

Conread position: 9-340
Cow position: chr25:24216413-24216087 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 238
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 96, 28

Conread position: 9-354
Cow position: chr25:17655487-17655841 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 28

Conread position: 9-382
Cow position: chr25:13454533-13454165 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 44

Conread position: 9-382
Cow position: chr25:18305196-18305565 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 255
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 109, 16

Conread position: 9-382
Cow position: chr25:36636631-36636262 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 251
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 186, 28

Conread position: 9-389
Cow position: chr25:30266548-30266925 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 261
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 96, 43

Conread position: 10-183
Cow position: chr25:27525092-27524925 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 126
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 10-339
Cow position: chr25:18212863-18212530 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 234
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 36, 125

Conread position: 10-381
Cow position: chr25:15365006-15365368 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 247
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 185, 13

Conread position: 11-377
Cow position: chr25:32901967-32902338 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 237
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 42, 14

Conread position: 12-372
Cow position: chr25:18251845-18251500 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 240
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 229, 24

Conread position: 20-382
Cow position: chr25:34345946-34345569 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 75

Conread position: 23-360
Cow position: chr25:14957389-14957039 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 14

Conread position: 26-382
Cow position: chr25:26899746-26900111 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 140

Conread position: 39-382
Cow position: chr25:24659137-24658786 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 136

Conread position: 40-381
Cow position: chr25:20774300-20773945 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 147

Conread position: 40-382
Cow position: chr25:34676954-34676608 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 229
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 75, 70

Conread position: 41-377
Cow position: chr25:11041444-11041781 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 136

Conread position: 48-390
Cow position: chr25:33576099-33575748 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 250
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 30, 105

Conread position: 67-377
Cow position: chr25:18450423-18450733 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 214
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 43, 53

Conread position: 112-381
Cow position: chr25:13693520-13693242 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 204
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 86, 65

Conread position: 136-373
Cow position: chr25:21902209-21902452 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 167
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 16, 40

Conread position: 140-359
Cow position: chr25:18486372-18486152 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 171
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 83, 10

Conread position: 159-381
Cow position: chr25:13062514-13062284 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 170
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 39, 18

Conread position: 182-382
Cow position: chr25:27523379-27523181 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 156
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 17, 61

Conread position: 224-382
Cow position: chr25:12757862-12757701 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 65, 17

Show alignments to all cow chromosomes.