Cow genome map
| Conread name: | Ss1.1-Spl1-SPL01G040079.5 |
| Conread position: | 1-146 |
| Cow position: | chr26:6806030-6805889 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 1-360 |
| Cow position: | chr26:19350462-19350095 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 33 |
| Conread position: | 1-382 |
| Cow position: | chr26:5676165-5676554 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 53 |
| Conread position: | 1-382 |
| Cow position: | chr26:17325128-17325518 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 85 |
| Conread position: | 1-382 |
| Cow position: | chr26:17395854-17395466 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 35 |
| Conread position: | 1-385 |
| Cow position: | chr26:21825633-21825236 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 157 |
| Conread position: | 3-372 |
| Cow position: | chr26:30783815-30784193 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 60 |
| Conread position: | 3-381 |
| Cow position: | chr26:1087384-1086997 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 33 |
| Conread position: | 3-381 |
| Cow position: | chr26:3029787-3029402 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 33 |
| Conread position: | 3-381 |
| Cow position: | chr26:18853280-18853653 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 270 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 103, 33 |
| Conread position: | 3-382 |
| Cow position: | chr26:8919891-8920278 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 52 |
| Conread position: | 6-342 |
| Cow position: | chr26:9843844-9843499 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 162 |
| Conread position: | 6-381 |
| Cow position: | chr26:4328388-4328010 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 66 |
| Conread position: | 6-382 |
| Cow position: | chr26:6848380-6848005 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 48 |
| Conread position: | 6-382 |
| Cow position: | chr26:14895003-14895384 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 123 |
| Conread position: | 6-382 |
| Cow position: | chr26:30588308-30587932 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 48 |
| Conread position: | 7-410 |
| Cow position: | chr26:4604115-4603663 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 315 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 103, 12 |
| Conread position: | 9-195 |
| Cow position: | chr26:32051995-32052177 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 132, 16 |
| Conread position: | 10-352 |
| Cow position: | chr26:8086232-8086571 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 109 |
| Conread position: | 12-390 |
| Cow position: | chr26:1627050-1627438 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 257 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 121, 165 |
| Conread position: | 18-365 |
| Cow position: | chr26:2199704-2200061 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 149 |
| Conread position: | 22-381 |
| Cow position: | chr26:12587484-12587117 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 155 |
| Conread position: | 42-371 |
| Cow position: | chr26:12666589-12666911 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 76 |
| Conread position: | 79-382 |
| Cow position: | chr26:9561659-9561342 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 97 |
| Conread position: | 102-389 |
| Cow position: | chr26:34012829-34013119 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 73 |
| Conread position: | 106-381 |
| Cow position: | chr26:8870986-8871271 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 41, 34 |
| Conread position: | 107-382 |
| Cow position: | chr26:6805903-6805626 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 70 |
| Conread position: | 116-381 |
| Cow position: | chr26:1087060-1086793 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 157 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 13, 34 |
| Conread position: | 146-362 |
| Cow position: | chr26:5218986-5218766 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 48, 31 |
| Conread position: | 250-381 |
| Cow position: | chr26:35369240-35369373 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 29, 121 |
| Conread position: | 256-381 |
| Cow position: | chr26:28373919-28373792 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 101 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 32, 115 |
Show alignments to all cow chromosomes.