Cow genome map
| Conread name: | Ss1.1-Spl1-SPL01G040079.5 |
| Conread position: | 1-357 |
| Cow position: | |
| Alignm length: | 372 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 49 |
| Conread position: | 1-359 |
| Cow position: | |
| Alignm length: | 370 |
| Alignm identity: | 258 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 198, 49 |
| Conread position: | 1-371 |
| Cow position: | |
| Alignm length: | 388 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 35 |
| Conread position: | 1-381 |
| Cow position: | |
| Alignm length: | 398 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 49 |
| Conread position: | 1-381 |
| Cow position: | |
| Alignm length: | 387 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 198, 53 |
| Conread position: | 1-381 |
| Cow position: | |
| Alignm length: | 393 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 33 |
| Conread position: | 1-381 |
| Cow position: | |
| Alignm length: | 393 |
| Alignm identity: | 261 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 194, 33 |
| Conread position: | 1-382 |
| Cow position: | |
| Alignm length: | 392 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 35 |
| Conread position: | 1-382 |
| Cow position: | |
| Alignm length: | 394 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 53 |
| Conread position: | 1-382 |
| Cow position: | |
| Alignm length: | 410 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 73 |
| Conread position: | 1-382 |
| Cow position: | |
| Alignm length: | 393 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 53 |
| Conread position: | 1-382 |
| Cow position: | |
| Alignm length: | 393 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 197, 34 |
| Conread position: | 1-382 |
| Cow position: | |
| Alignm length: | 398 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 53 |
| Conread position: | 1-382 |
| Cow position: | |
| Alignm length: | 397 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 56 |
| Conread position: | 1-382 |
| Cow position: | |
| Alignm length: | 391 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 34 |
| Conread position: | 1-383 |
| Cow position: | |
| Alignm length: | 394 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 53 |
| Conread position: | 1-389 |
| Cow position: | |
| Alignm length: | 398 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 54 |
| Conread position: | 3-258 |
| Cow position: | |
| Alignm length: | 259 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 193, 34 |
| Conread position: | 3-302 |
| Cow position: | |
| Alignm length: | 306 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 234, 33 |
| Conread position: | 3-372 |
| Cow position: | |
| Alignm length: | 378 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 174 |
| Conread position: | 3-380 |
| Cow position: | |
| Alignm length: | 391 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 31 |
| Conread position: | 3-381 |
| Cow position: | |
| Alignm length: | 387 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 31 |
| Conread position: | 3-381 |
| Cow position: | |
| Alignm length: | 387 |
| Alignm identity: | 262 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 195, 33 |
| Conread position: | 3-381 |
| Cow position: | |
| Alignm length: | 391 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 33 |
| Conread position: | 3-381 |
| Cow position: | |
| Alignm length: | 392 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 166 |
| Conread position: | 3-381 |
| Cow position: | |
| Alignm length: | 391 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 33 |
| Conread position: | 3-382 |
| Cow position: | |
| Alignm length: | 391 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 33 |
| Conread position: | 3-384 |
| Cow position: | |
| Alignm length: | 391 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 164 |
| Conread position: | 3-389 |
| Cow position: | |
| Alignm length: | 398 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 30 |
| Conread position: | 6-381 |
| Cow position: | |
| Alignm length: | 388 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 160 |
| Conread position: | 6-382 |
| Cow position: | |
| Alignm length: | 389 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 155 |
| Conread position: | 6-382 |
| Cow position: | |
| Alignm length: | 388 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 29 |
| Conread position: | 6-437 |
| Cow position: | |
| Alignm length: | 452 |
| Alignm identity: | 297 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 108, 30 |
| Conread position: | 9-233 |
| Cow position: | |
| Alignm length: | 227 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 185, 7 |
| Conread position: | 9-320 |
| Cow position: | |
| Alignm length: | 317 |
| Alignm identity: | 214 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 81, 16 |
| Conread position: | 9-369 |
| Cow position: | |
| Alignm length: | 371 |
| Alignm identity: | 238 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 190, 86 |
| Conread position: | 9-380 |
| Cow position: | |
| Alignm length: | 385 |
| Alignm identity: | 261 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 143, 45 |
| Conread position: | 9-381 |
| Cow position: | |
| Alignm length: | 375 |
| Alignm identity: | 253 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 186, 46 |
| Conread position: | 9-381 |
| Cow position: | |
| Alignm length: | 386 |
| Alignm identity: | 271 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 28, 65 |
| Conread position: | 9-381 |
| Cow position: | |
| Alignm length: | 381 |
| Alignm identity: | 252 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 24, 109 |
| Conread position: | 9-382 |
| Cow position: | |
| Alignm length: | 383 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 45 |
| Conread position: | 9-382 |
| Cow position: | |
| Alignm length: | 383 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 232, 16 |
| Conread position: | 9-382 |
| Cow position: | |
| Alignm length: | 393 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 226, 45 |
| Conread position: | 10-367 |
| Cow position: | |
| Alignm length: | 371 |
| Alignm identity: | 249 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 25, 126 |
| Conread position: | 11-381 |
| Cow position: | |
| Alignm length: | 377 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 26 |
| Conread position: | 12-287 |
| Cow position: | |
| Alignm length: | 288 |
| Alignm identity: | 204 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 5, 42 |
| Conread position: | 12-382 |
| Cow position: | |
| Alignm length: | 382 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 13 |
| Conread position: | 12-382 |
| Cow position: | |
| Alignm length: | 389 |
| Alignm identity: | 249 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 5, 57 |
| Conread position: | 12-384 |
| Cow position: | |
| Alignm length: | 382 |
| Alignm identity: | 247 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 39, 99 |
| Conread position: | 16-382 |
| Cow position: | |
| Alignm length: | 376 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 151 |
| Conread position: | 17-411 |
| Cow position: | |
| Alignm length: | 416 |
| Alignm identity: | 285 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 17, 133 |
| Conread position: | 18-380 |
| Cow position: | |
| Alignm length: | 375 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 149 |
| Conread position: | 18-382 |
| Cow position: | |
| Alignm length: | 374 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 16 |
| Conread position: | 18-382 |
| Cow position: | |
| Alignm length: | 377 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 149 |
| Conread position: | 23-382 |
| Cow position: | |
| Alignm length: | 374 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 88 |
| Conread position: | 24-382 |
| Cow position: | |
| Alignm length: | 370 |
| Alignm identity: | 252 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 146, 13 |
| Conread position: | 28-361 |
| Cow position: | |
| Alignm length: | 347 |
| Alignm identity: | 249 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 196, 23 |
| Conread position: | 28-370 |
| Cow position: | |
| Alignm length: | 355 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 42 |
| Conread position: | 31-406 |
| Cow position: | |
| Alignm length: | 387 |
| Alignm identity: | 259 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 168, 75 |
| Conread position: | 33-382 |
| Cow position: | |
| Alignm length: | 366 |
| Alignm identity: | 257 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 86, 145 |
| Conread position: | 37-382 |
| Cow position: | |
| Alignm length: | 347 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 51 |
| Conread position: | 38-370 |
| Cow position: | |
| Alignm length: | 351 |
| Alignm identity: | 247 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 108, 80 |
| Conread position: | 38-377 |
| Cow position: | |
| Alignm length: | 343 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 157, 40 |
| Conread position: | 38-382 |
| Cow position: | |
| Alignm length: | 355 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 44-382 |
| Cow position: | |
| Alignm length: | 343 |
| Alignm identity: | 238 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 150, 47 |
| Conread position: | 48-383 |
| Cow position: | |
| Alignm length: | 337 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 88, 29 |
| Conread position: | 49-334 |
| Cow position: | |
| Alignm length: | 297 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 147, 78 |
| Conread position: | 62-378 |
| Cow position: | |
| Alignm length: | 326 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 22, 13 |
| Conread position: | 63-345 |
| Cow position: | |
| Alignm length: | 294 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 7, 95 |
| Conread position: | 63-382 |
| Cow position: | |
| Alignm length: | 328 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 28 |
| Conread position: | 63-382 |
| Cow position: | |
| Alignm length: | 335 |
| Alignm identity: | 235 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 24, 30 |
| Conread position: | 79-382 |
| Cow position: | |
| Alignm length: | 315 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 80 |
| Conread position: | 95-285 |
| Cow position: | |
| Alignm length: | 199 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 100, 40 |
| Conread position: | 100-381 |
| Cow position: | |
| Alignm length: | 293 |
| Alignm identity: | 216 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 96, 68 |
| Conread position: | 101-373 |
| Cow position: | |
| Alignm length: | 280 |
| Alignm identity: | 212 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 9, 50 |
| Conread position: | 101-382 |
| Cow position: | |
| Alignm length: | 288 |
| Alignm identity: | 206 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 97, 76 |
| Conread position: | 107-382 |
| Cow position: | |
| Alignm length: | 292 |
| Alignm identity: | 197 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 22, 34 |
| Conread position: | 117-371 |
| Cow position: | |
| Alignm length: | 264 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 78, 49 |
| Conread position: | 121-382 |
| Cow position: | |
| Alignm length: | 271 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 77, 10 |
| Conread position: | 137-382 |
| Cow position: | |
| Alignm length: | 257 |
| Alignm identity: | 194 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 62, 38 |
| Conread position: | 142-368 |
| Cow position: | |
| Alignm length: | 232 |
| Alignm identity: | 170 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 58, 33 |
| Conread position: | 177-382 |
| Cow position: | |
| Alignm length: | 216 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 19, 190 |
| Conread position: | 195-381 |
| Cow position: | |
| Alignm length: | 195 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 67, 181 |
| Conread position: | 223-384 |
| Cow position: | |
| Alignm length: | 167 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 24, 102 |
| Conread position: | 256-381 |
| Cow position: | |
| Alignm length: | 129 |
| Alignm identity: | 100 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 32, 115 |
Show alignments to all cow chromosomes.