Cow genome map
| Conread name: | Ss1.1-Spl1-SPL01G040079.5 |
| Conread position: | 1-340 |
| Cow position: | chr5:23669307-23668960 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 198, 109 |
| Conread position: | 1-360 |
| Cow position: | chr5:41960914-41960554 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 125 |
| Conread position: | 1-372 |
| Cow position: | chr5:4386065-4386438 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 33 |
| Conread position: | 1-381 |
| Cow position: | chr5:6154078-6153690 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 34 |
| Conread position: | 1-382 |
| Cow position: | chr5:1341210-1340820 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 53 |
| Conread position: | 1-382 |
| Cow position: | chr5:4070031-4070431 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 53 |
| Conread position: | 1-382 |
| Cow position: | chr5:7274674-7275050 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 49 |
| Conread position: | 1-382 |
| Cow position: | chr5:18400867-18400480 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 266 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 194, 22 |
| Conread position: | 1-382 |
| Cow position: | chr5:24099489-24099871 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 49 |
| Conread position: | 1-382 |
| Cow position: | chr5:34697426-34697811 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 198, 50 |
| Conread position: | 1-382 |
| Cow position: | chr5:37733166-37733559 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 119 |
| Conread position: | 1-382 |
| Cow position: | chr5:41527965-41527583 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 198, 75 |
| Conread position: | 1-382 |
| Cow position: | chr5:45701135-45701524 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 124 |
| Conread position: | 1-382 |
| Cow position: | chr5:48807916-48807522 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 198, 35 |
| Conread position: | 1-382 |
| Cow position: | chr5:49519383-49519766 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 53 |
| Conread position: | 1-382 |
| Cow position: | chr5:55628814-55629204 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 53 |
| Conread position: | 1-382 |
| Cow position: | chr5:57481716-57481330 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 53 |
| Conread position: | 1-382 |
| Cow position: | chr5:59283139-59283526 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 198, 53 |
| Conread position: | 1-382 |
| Cow position: | chr5:64781193-64780805 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 198, 53 |
| Conread position: | 1-401 |
| Cow position: | chr5:53625100-53624691 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 251 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 194, 53 |
| Conread position: | 2-349 |
| Cow position: | chr5:48137516-48137172 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 243 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 192, 23 |
| Conread position: | 2-381 |
| Cow position: | chr5:10775447-10775054 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 50 |
| Conread position: | 2-381 |
| Cow position: | chr5:42505828-42506214 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 34 |
| Conread position: | 3-195 |
| Cow position: | chr5:45181320-45181131 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 3-230 |
| Cow position: | chr5:38073856-38074082 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 193, 33 |
| Conread position: | 3-258 |
| Cow position: | chr5:6588188-6587941 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 47, 111 |
| Conread position: | 3-291 |
| Cow position: | chr5:39016861-39017145 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 193, 33 |
| Conread position: | 3-377 |
| Cow position: | chr5:307503-307120 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 264 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 193, 34 |
| Conread position: | 3-377 |
| Cow position: | chr5:58196840-58197221 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 242 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 193, 50 |
| Conread position: | 3-381 |
| Cow position: | chr5:3965275-3965653 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 33 |
| Conread position: | 3-381 |
| Cow position: | chr5:4018370-4017989 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 20 |
| Conread position: | 3-381 |
| Cow position: | chr5:5104046-5104431 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 31 |
| Conread position: | 3-381 |
| Cow position: | chr5:12731886-12731505 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 31 |
| Conread position: | 3-381 |
| Cow position: | chr5:18121658-18121273 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 53 |
| Conread position: | 3-381 |
| Cow position: | chr5:26078369-26077983 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 33 |
| Conread position: | 3-381 |
| Cow position: | chr5:35300922-35301307 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 33 |
| Conread position: | 3-381 |
| Cow position: | chr5:46808136-46808522 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 33 |
| Conread position: | 3-382 |
| Cow position: | chr5:10842553-10842171 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 269 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 196, 19 |
| Conread position: | 3-382 |
| Cow position: | chr5:12642914-12642539 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 31 |
| Conread position: | 3-382 |
| Cow position: | chr5:46005032-46004647 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 31 |
| Conread position: | 3-383 |
| Cow position: | chr5:27908446-27908060 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 68 |
| Conread position: | 3-388 |
| Cow position: | chr5:46664842-46665225 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 33 |
| Conread position: | 6-247 |
| Cow position: | chr5:24999158-24998921 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 119, 31 |
| Conread position: | 6-380 |
| Cow position: | chr5:2915274-2915658 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 171 |
| Conread position: | 6-381 |
| Cow position: | chr5:4757337-4756974 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 266 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 189, 30 |
| Conread position: | 6-382 |
| Cow position: | chr5:18273566-18273969 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 286 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 14, 73 |
| Conread position: | 6-382 |
| Cow position: | chr5:24151612-24151984 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 41 |
| Conread position: | 6-382 |
| Cow position: | chr5:31100598-31100218 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 171 |
| Conread position: | 6-382 |
| Cow position: | chr5:73488731-73488350 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 30 |
| Conread position: | 9-355 |
| Cow position: | chr5:48855046-48855396 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 239 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 110, 42 |
| Conread position: | 9-376 |
| Cow position: | chr5:18885696-18885332 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 250 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 98, 27 |
| Conread position: | 9-382 |
| Cow position: | chr5:10855985-10855607 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 45 |
| Conread position: | 9-384 |
| Cow position: | chr5:46629350-46628976 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 27 |
| Conread position: | 9-415 |
| Cow position: | chr5:58151953-58151533 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 278 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 12, 59 |
| Conread position: | 10-382 |
| Cow position: | chr5:51309028-51308642 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 12 |
| Conread position: | 10-382 |
| Cow position: | chr5:54791804-54791422 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 166 |
| Conread position: | 11-327 |
| Cow position: | chr5:41465906-41466231 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 90, 24 |
| Conread position: | 11-359 |
| Cow position: | chr5:23687059-23686701 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 24 |
| Conread position: | 11-371 |
| Cow position: | chr5:40788898-40789256 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 257 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 145, 14 |
| Conread position: | 11-382 |
| Cow position: | chr5:34297774-34298125 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 256 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 75, 8 |
| Conread position: | 11-382 |
| Cow position: | chr5:51770118-51769764 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 249 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 186, 79 |
| Conread position: | 12-382 |
| Cow position: | chr5:3503274-3502898 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 145 |
| Conread position: | 12-382 |
| Cow position: | chr5:41554502-41554125 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 24 |
| Conread position: | 12-386 |
| Cow position: | chr5:46668779-46669148 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 21 |
| Conread position: | 15-166 |
| Cow position: | chr5:32282130-32281979 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 15-195 |
| Cow position: | chr5:35526650-35526823 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 16-382 |
| Cow position: | chr5:3786763-3787138 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 149 |
| Conread position: | 17-166 |
| Cow position: | chr5:27002840-27002988 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 17-382 |
| Cow position: | chr5:14784519-14784159 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 256 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 182, 96 |
| Conread position: | 17-382 |
| Cow position: | chr5:31707399-31707773 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 122 |
| Conread position: | 18-245 |
| Cow position: | chr5:13046289-13046523 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 70, 33 |
| Conread position: | 19-382 |
| Cow position: | chr5:59061474-59061848 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 148 |
| Conread position: | 20-338 |
| Cow position: | chr5:15375556-15375875 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 214 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 93, 86 |
| Conread position: | 20-382 |
| Cow position: | chr5:58548850-58549204 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 42, 92 |
| Conread position: | 21-381 |
| Cow position: | chr5:32773606-32773974 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 145 |
| Conread position: | 23-382 |
| Cow position: | chr5:30580181-30580554 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 153 |
| Conread position: | 25-369 |
| Cow position: | chr5:27197166-27197512 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 219, 26 |
| Conread position: | 31-381 |
| Cow position: | chr5:46777242-46777602 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 71 |
| Conread position: | 39-370 |
| Cow position: | chr5:14344572-14344239 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 156, 88 |
| Conread position: | 39-382 |
| Cow position: | chr5:47893687-47893334 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 249 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 66, 76 |
| Conread position: | 40-381 |
| Cow position: | chr5:47830215-47829868 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 70 |
| Conread position: | 40-382 |
| Cow position: | chr5:988202-987858 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 126 |
| Conread position: | 48-386 |
| Cow position: | chr5:53006488-53006824 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 65, 31 |
| Conread position: | 50-383 |
| Cow position: | chr5:44218914-44219258 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 58, 39 |
| Conread position: | 51-381 |
| Cow position: | chr5:29766998-29767333 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 99 |
| Conread position: | 57-382 |
| Cow position: | chr5:18560526-18560196 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 85 |
| Conread position: | 61-382 |
| Cow position: | chr5:43193529-43193202 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 213 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 55, 116 |
| Conread position: | 62-369 |
| Cow position: | chr5:29434831-29434519 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 229 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 42, 23 |
| Conread position: | 63-373 |
| Cow position: | chr5:32308224-32307907 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 223 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 72, 113 |
| Conread position: | 79-382 |
| Cow position: | chr5:60716710-60716407 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 209 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 117, 65 |
| Conread position: | 82-285 |
| Cow position: | chr5:31700469-31700259 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 117, 84 |
| Conread position: | 82-380 |
| Cow position: | chr5:26183744-26184047 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 36 |
| Conread position: | 83-381 |
| Cow position: | chr5:28949977-28949671 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 224 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 19, 34 |
| Conread position: | 88-365 |
| Cow position: | chr5:7143139-7142860 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 153, 21 |
| Conread position: | 90-371 |
| Cow position: | chr5:50870538-50870820 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 212 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 108, 60 |
| Conread position: | 95-298 |
| Cow position: | chr5:28012586-28012799 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 101, 81 |
| Conread position: | 95-360 |
| Cow position: | chr5:40350013-40349739 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 104, 80 |
| Conread position: | 98-370 |
| Cow position: | chr5:18664701-18664984 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 100, 79 |
| Conread position: | 98-381 |
| Cow position: | chr5:23959411-23959120 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 214 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 100, 79 |
| Conread position: | 104-370 |
| Cow position: | chr5:32363875-32364132 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 5, 10 |
| Conread position: | 105-380 |
| Cow position: | chr5:41376976-41376698 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 93, 41 |
| Conread position: | 106-384 |
| Cow position: | chr5:40923713-40923434 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 211 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 90, 18 |
| Conread position: | 121-388 |
| Cow position: | chr5:23229934-23230204 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 197 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 76, 38 |
| Conread position: | 149-382 |
| Cow position: | chr5:10813782-10813540 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 49, 28 |
| Conread position: | 157-389 |
| Cow position: | chr5:27003212-27003454 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 42, 18 |
| Conread position: | 161-382 |
| Cow position: | chr5:32951881-32952108 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 38, 157 |
| Conread position: | 162-382 |
| Cow position: | chr5:32281784-32281558 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 178 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 37, 132 |
| Conread position: | 200-382 |
| Cow position: | chr5:52434759-52434951 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 41, 178 |
| Conread position: | 201-358 |
| Cow position: | chr5:61081192-61081027 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 40, 13 |
| Conread position: | 223-381 |
| Cow position: | chr5:55653801-55653635 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 19, 154 |
| Conread position: | 231-377 |
| Cow position: | chr5:53945902-53946048 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 132, 10 |
| Conread position: | 247-378 |
| Cow position: | chr5:34189989-34190122 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 112 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 35, 124 |
| Conread position: | 257-381 |
| Cow position: | chr5:6587501-6587375 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 33, 114 |
| Conread position: | 257-382 |
| Cow position: | chr5:13046740-13046867 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 24, 113 |
| Conread position: | 261-382 |
| Cow position: | chr5:40757551-40757666 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 66, 0 |
Show alignments to all cow chromosomes.