Cow genome map

Conread name: Ss1.1-Spl1-SPL01G040079.5

Conread position: 1-340
Cow position:
Alignm length: 351
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 109

Conread position: 1-360
Cow position:
Alignm length: 368
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 125

Conread position: 1-372
Cow position:
Alignm length: 379
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 33

Conread position: 1-381
Cow position:
Alignm length: 395
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 34

Conread position: 1-382
Cow position:
Alignm length: 395
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 53

Conread position: 1-382
Cow position:
Alignm length: 405
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 53

Conread position: 1-382
Cow position:
Alignm length: 389
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 49

Conread position: 1-382
Cow position:
Alignm length: 401
Alignm identity: 266
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 194, 22

Conread position: 1-382
Cow position:
Alignm length: 391
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 49

Conread position: 1-382
Cow position:
Alignm length: 392
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 50

Conread position: 1-382
Cow position:
Alignm length: 398
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 119

Conread position: 1-382
Cow position:
Alignm length: 395
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 75

Conread position: 1-382
Cow position:
Alignm length: 394
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 124

Conread position: 1-382
Cow position:
Alignm length: 399
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 35

Conread position: 1-382
Cow position:
Alignm length: 390
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 53

Conread position: 1-382
Cow position:
Alignm length: 395
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 53

Conread position: 1-382
Cow position:
Alignm length: 392
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 53

Conread position: 1-382
Cow position:
Alignm length: 392
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 53

Conread position: 1-382
Cow position:
Alignm length: 393
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 53

Conread position: 1-401
Cow position:
Alignm length: 414
Alignm identity: 251
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 194, 53

Conread position: 2-349
Cow position:
Alignm length: 359
Alignm identity: 243
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 192, 23

Conread position: 2-381
Cow position:
Alignm length: 398
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 50

Conread position: 2-381
Cow position:
Alignm length: 391
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 34

Conread position: 3-195
Cow position:
Alignm length: 193
Alignm identity: 132
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 3-230
Cow position:
Alignm length: 230
Alignm identity: 156
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 193, 33

Conread position: 3-258
Cow position:
Alignm length: 260
Alignm identity: 175
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 47, 111

Conread position: 3-291
Cow position:
Alignm length: 291
Alignm identity: 190
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 193, 33

Conread position: 3-377
Cow position:
Alignm length: 388
Alignm identity: 264
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 193, 34

Conread position: 3-377
Cow position:
Alignm length: 388
Alignm identity: 242
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 193, 50

Conread position: 3-381
Cow position:
Alignm length: 387
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 33

Conread position: 3-381
Cow position:
Alignm length: 386
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 20

Conread position: 3-381
Cow position:
Alignm length: 390
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 31

Conread position: 3-381
Cow position:
Alignm length: 387
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 31

Conread position: 3-381
Cow position:
Alignm length: 390
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 53

Conread position: 3-381
Cow position:
Alignm length: 391
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 33

Conread position: 3-381
Cow position:
Alignm length: 391
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 33

Conread position: 3-381
Cow position:
Alignm length: 391
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 33

Conread position: 3-382
Cow position:
Alignm length: 394
Alignm identity: 269
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 196, 19

Conread position: 3-382
Cow position:
Alignm length: 389
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 31

Conread position: 3-382
Cow position:
Alignm length: 389
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 31

Conread position: 3-383
Cow position:
Alignm length: 391
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 68

Conread position: 3-388
Cow position:
Alignm length: 390
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 33

Conread position: 6-247
Cow position:
Alignm length: 246
Alignm identity: 179
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 119, 31

Conread position: 6-380
Cow position:
Alignm length: 386
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 171

Conread position: 6-381
Cow position:
Alignm length: 388
Alignm identity: 266
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 189, 30

Conread position: 6-382
Cow position:
Alignm length: 411
Alignm identity: 286
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 14, 73

Conread position: 6-382
Cow position:
Alignm length: 384
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 41

Conread position: 6-382
Cow position:
Alignm length: 384
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 171

Conread position: 6-382
Cow position:
Alignm length: 387
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 30

Conread position: 9-355
Cow position:
Alignm length: 358
Alignm identity: 239
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 110, 42

Conread position: 9-376
Cow position:
Alignm length: 378
Alignm identity: 250
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 98, 27

Conread position: 9-382
Cow position:
Alignm length: 384
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 45

Conread position: 9-384
Cow position:
Alignm length: 385
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 27

Conread position: 9-415
Cow position:
Alignm length: 425
Alignm identity: 278
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 12, 59

Conread position: 10-382
Cow position:
Alignm length: 395
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 12

Conread position: 10-382
Cow position:
Alignm length: 385
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 166

Conread position: 11-327
Cow position:
Alignm length: 334
Alignm identity: 227
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 90, 24

Conread position: 11-359
Cow position:
Alignm length: 364
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 24

Conread position: 11-371
Cow position:
Alignm length: 369
Alignm identity: 257
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 145, 14

Conread position: 11-382
Cow position:
Alignm length: 376
Alignm identity: 256
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 75, 8

Conread position: 11-382
Cow position:
Alignm length: 375
Alignm identity: 249
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 186, 79

Conread position: 12-382
Cow position:
Alignm length: 382
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 145

Conread position: 12-382
Cow position:
Alignm length: 387
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 24

Conread position: 12-386
Cow position:
Alignm length: 383
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 21

Conread position: 15-166
Cow position:
Alignm length: 152
Alignm identity: 109
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 15-195
Cow position:
Alignm length: 181
Alignm identity: 128
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 16-382
Cow position:
Alignm length: 381
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 149

Conread position: 17-166
Cow position:
Alignm length: 150
Alignm identity: 108
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 17-382
Cow position:
Alignm length: 375
Alignm identity: 256
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 182, 96

Conread position: 17-382
Cow position:
Alignm length: 378
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 122

Conread position: 18-245
Cow position:
Alignm length: 237
Alignm identity: 177
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 70, 33

Conread position: 19-382
Cow position:
Alignm length: 377
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 148

Conread position: 20-338
Cow position:
Alignm length: 327
Alignm identity: 214
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 93, 86

Conread position: 20-382
Cow position:
Alignm length: 367
Alignm identity: 231
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 42, 92

Conread position: 21-381
Cow position:
Alignm length: 372
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 145

Conread position: 23-382
Cow position:
Alignm length: 376
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 153

Conread position: 25-369
Cow position:
Alignm length: 351
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 26

Conread position: 31-381
Cow position:
Alignm length: 366
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 71

Conread position: 39-370
Cow position:
Alignm length: 343
Alignm identity: 224
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 156, 88

Conread position: 39-382
Cow position:
Alignm length: 359
Alignm identity: 249
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 66, 76

Conread position: 40-381
Cow position:
Alignm length: 353
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 70

Conread position: 40-382
Cow position:
Alignm length: 348
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 126

Conread position: 48-386
Cow position:
Alignm length: 346
Alignm identity: 230
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 65, 31

Conread position: 50-383
Cow position:
Alignm length: 347
Alignm identity: 220
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 58, 39

Conread position: 51-381
Cow position:
Alignm length: 340
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 99

Conread position: 57-382
Cow position:
Alignm length: 337
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 85

Conread position: 61-382
Cow position:
Alignm length: 332
Alignm identity: 213
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 55, 116

Conread position: 62-369
Cow position:
Alignm length: 323
Alignm identity: 229
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 42, 23

Conread position: 63-373
Cow position:
Alignm length: 319
Alignm identity: 223
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 72, 113

Conread position: 79-382
Cow position:
Alignm length: 313
Alignm identity: 209
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 117, 65

Conread position: 82-285
Cow position:
Alignm length: 212
Alignm identity: 150
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 117, 84

Conread position: 82-380
Cow position:
Alignm length: 309
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 36

Conread position: 83-381
Cow position:
Alignm length: 311
Alignm identity: 224
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 19, 34

Conread position: 88-365
Cow position:
Alignm length: 282
Alignm identity: 172
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 153, 21

Conread position: 90-371
Cow position:
Alignm length: 290
Alignm identity: 212
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 108, 60

Conread position: 95-298
Cow position:
Alignm length: 215
Alignm identity: 156
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 101, 81

Conread position: 95-360
Cow position:
Alignm length: 280
Alignm identity: 189
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 104, 80

Conread position: 98-370
Cow position:
Alignm length: 285
Alignm identity: 204
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 100, 79

Conread position: 98-381
Cow position:
Alignm length: 294
Alignm identity: 214
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 100, 79

Conread position: 104-370
Cow position:
Alignm length: 271
Alignm identity: 193
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 5, 10

Conread position: 105-380
Cow position:
Alignm length: 287
Alignm identity: 202
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 93, 41

Conread position: 106-384
Cow position:
Alignm length: 287
Alignm identity: 211
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 90, 18

Conread position: 121-388
Cow position:
Alignm length: 275
Alignm identity: 197
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 76, 38

Conread position: 149-382
Cow position:
Alignm length: 245
Alignm identity: 183
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 49, 28

Conread position: 157-389
Cow position:
Alignm length: 246
Alignm identity: 183
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 42, 18

Conread position: 161-382
Cow position:
Alignm length: 231
Alignm identity: 167
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 38, 157

Conread position: 162-382
Cow position:
Alignm length: 230
Alignm identity: 178
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 37, 132

Conread position: 200-382
Cow position:
Alignm length: 194
Alignm identity: 150
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 41, 178

Conread position: 201-358
Cow position:
Alignm length: 167
Alignm identity: 132
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 40, 13

Conread position: 223-381
Cow position:
Alignm length: 168
Alignm identity: 126
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 19, 154

Conread position: 231-377
Cow position:
Alignm length: 148
Alignm identity: 120
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 132, 10

Conread position: 247-378
Cow position:
Alignm length: 135
Alignm identity: 112
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 35, 124

Conread position: 257-381
Cow position:
Alignm length: 128
Alignm identity: 100
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 33, 114

Conread position: 257-382
Cow position:
Alignm length: 129
Alignm identity: 102
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 24, 113

Conread position: 261-382
Cow position:
Alignm length: 122
Alignm identity: 98
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 66, 0

Show alignments to all cow chromosomes.