Cow genome map

Conread name: Ss1.1-Spl1-SPL01G040079.5

Conread position: 1-212
Cow position:
Alignm length: 214
Alignm identity: 152
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 194, 53

Conread position: 1-219
Cow position:
Alignm length: 221
Alignm identity: 156
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 193, 53

Conread position: 1-357
Cow position:
Alignm length: 378
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 53

Conread position: 1-358
Cow position:
Alignm length: 367
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 53

Conread position: 1-367
Cow position:
Alignm length: 383
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 50

Conread position: 1-370
Cow position:
Alignm length: 383
Alignm identity: 254
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 46, 14

Conread position: 1-371
Cow position:
Alignm length: 379
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 33

Conread position: 1-374
Cow position:
Alignm length: 391
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 33

Conread position: 1-377
Cow position:
Alignm length: 385
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 175

Conread position: 1-377
Cow position:
Alignm length: 394
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 35

Conread position: 1-381
Cow position:
Alignm length: 390
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 33

Conread position: 1-382
Cow position:
Alignm length: 393
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 33

Conread position: 1-382
Cow position:
Alignm length: 390
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 50

Conread position: 1-382
Cow position:
Alignm length: 394
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 118

Conread position: 1-382
Cow position:
Alignm length: 389
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 31

Conread position: 1-382
Cow position:
Alignm length: 395
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 114

Conread position: 1-382
Cow position:
Alignm length: 390
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 53

Conread position: 1-382
Cow position:
Alignm length: 399
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 167

Conread position: 1-382
Cow position:
Alignm length: 393
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 53

Conread position: 1-382
Cow position:
Alignm length: 388
Alignm identity: 266
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 118, 53

Conread position: 1-382
Cow position:
Alignm length: 393
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 53

Conread position: 1-382
Cow position:
Alignm length: 398
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 33

Conread position: 1-384
Cow position:
Alignm length: 395
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 53

Conread position: 1-384
Cow position:
Alignm length: 405
Alignm identity: 285
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 198, 32

Conread position: 1-384
Cow position:
Alignm length: 398
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 53

Conread position: 1-389
Cow position:
Alignm length: 401
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 165

Conread position: 1-389
Cow position:
Alignm length: 404
Alignm identity: 283
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 234, 33

Conread position: 1-390
Cow position:
Alignm length: 401
Alignm identity: 282
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 198, 35

Conread position: 2-381
Cow position:
Alignm length: 398
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 23

Conread position: 3-194
Cow position:
Alignm length: 195
Alignm identity: 137
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 88, 20

Conread position: 3-258
Cow position:
Alignm length: 259
Alignm identity: 180
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 192, 33

Conread position: 3-272
Cow position:
Alignm length: 273
Alignm identity: 184
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 193, 33

Conread position: 3-272
Cow position:
Alignm length: 273
Alignm identity: 184
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 193, 33

Conread position: 3-351
Cow position:
Alignm length: 368
Alignm identity: 257
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 47, 135

Conread position: 3-351
Cow position:
Alignm length: 360
Alignm identity: 248
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 195, 33

Conread position: 3-371
Cow position:
Alignm length: 382
Alignm identity: 260
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 112, 33

Conread position: 3-372
Cow position:
Alignm length: 381
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 33

Conread position: 3-375
Cow position:
Alignm length: 385
Alignm identity: 269
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 196, 49

Conread position: 3-381
Cow position:
Alignm length: 390
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 31

Conread position: 3-381
Cow position:
Alignm length: 390
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 33

Conread position: 3-381
Cow position:
Alignm length: 390
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 33

Conread position: 3-381
Cow position:
Alignm length: 390
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 163

Conread position: 3-381
Cow position:
Alignm length: 390
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 163

Conread position: 3-381
Cow position:
Alignm length: 388
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 123

Conread position: 3-381
Cow position:
Alignm length: 390
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 30

Conread position: 3-381
Cow position:
Alignm length: 393
Alignm identity: 270
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 113, 33

Conread position: 3-381
Cow position:
Alignm length: 390
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 33

Conread position: 3-381
Cow position:
Alignm length: 394
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 150

Conread position: 3-381
Cow position:
Alignm length: 390
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 33

Conread position: 3-382
Cow position:
Alignm length: 388
Alignm identity: 266
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 195, 33

Conread position: 3-382
Cow position:
Alignm length: 392
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 33

Conread position: 3-382
Cow position:
Alignm length: 391
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 33

Conread position: 3-382
Cow position:
Alignm length: 401
Alignm identity: 273
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 18, 53

Conread position: 3-389
Cow position:
Alignm length: 401
Alignm identity: 278
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 193, 33

Conread position: 3-437
Cow position:
Alignm length: 454
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 175

Conread position: 6-366
Cow position:
Alignm length: 370
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 48

Conread position: 6-371
Cow position:
Alignm length: 380
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 146

Conread position: 6-381
Cow position:
Alignm length: 387
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 27

Conread position: 6-381
Cow position:
Alignm length: 388
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 48

Conread position: 6-382
Cow position:
Alignm length: 385
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 49

Conread position: 6-382
Cow position:
Alignm length: 389
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 48

Conread position: 6-382
Cow position:
Alignm length: 383
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 48

Conread position: 6-382
Cow position:
Alignm length: 390
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 163

Conread position: 7-382
Cow position:
Alignm length: 388
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 170

Conread position: 7-382
Cow position:
Alignm length: 386
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 27

Conread position: 9-278
Cow position:
Alignm length: 282
Alignm identity: 199
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 110, 171

Conread position: 9-371
Cow position:
Alignm length: 386
Alignm identity: 266
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 166, 367

Conread position: 9-377
Cow position:
Alignm length: 376
Alignm identity: 254
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 126, 46

Conread position: 9-381
Cow position:
Alignm length: 384
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 27

Conread position: 9-382
Cow position:
Alignm length: 376
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 27

Conread position: 9-382
Cow position:
Alignm length: 388
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 24

Conread position: 9-382
Cow position:
Alignm length: 382
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 45

Conread position: 9-395
Cow position:
Alignm length: 410
Alignm identity: 284
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 186, 132

Conread position: 9-419
Cow position:
Alignm length: 426
Alignm identity: 270
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 78, 132

Conread position: 10-191
Cow position:
Alignm length: 182
Alignm identity: 136
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 44, 0

Conread position: 10-382
Cow position:
Alignm length: 390
Alignm identity: 269
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 34, 114

Conread position: 10-382
Cow position:
Alignm length: 381
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 165

Conread position: 10-382
Cow position:
Alignm length: 380
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 156

Conread position: 11-227
Cow position:
Alignm length: 221
Alignm identity: 161
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 12, 45

Conread position: 11-377
Cow position:
Alignm length: 379
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 23

Conread position: 11-377
Cow position:
Alignm length: 377
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 12

Conread position: 12-381
Cow position:
Alignm length: 378
Alignm identity: 259
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 186, 92

Conread position: 16-377
Cow position:
Alignm length: 385
Alignm identity: 248
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 42, 77

Conread position: 16-382
Cow position:
Alignm length: 382
Alignm identity: 270
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 33, 102

Conread position: 17-382
Cow position:
Alignm length: 370
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 145

Conread position: 17-388
Cow position:
Alignm length: 385
Alignm identity: 269
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 181, 38

Conread position: 18-373
Cow position:
Alignm length: 370
Alignm identity: 254
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 112, 158

Conread position: 18-382
Cow position:
Alignm length: 373
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 18-444
Cow position:
Alignm length: 449
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 95

Conread position: 20-382
Cow position:
Alignm length: 380
Alignm identity: 267
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 154, 66

Conread position: 22-370
Cow position:
Alignm length: 369
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 156

Conread position: 22-382
Cow position:
Alignm length: 372
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 85

Conread position: 23-382
Cow position:
Alignm length: 371
Alignm identity: 253
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 14, 67

Conread position: 24-355
Cow position:
Alignm length: 347
Alignm identity: 253
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 45, 11

Conread position: 27-381
Cow position:
Alignm length: 364
Alignm identity: 241
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 137, 90

Conread position: 28-382
Cow position:
Alignm length: 369
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 29-296
Cow position:
Alignm length: 279
Alignm identity: 189
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 168, 25

Conread position: 33-382
Cow position:
Alignm length: 368
Alignm identity: 253
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 67, 112

Conread position: 37-382
Cow position:
Alignm length: 357
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 67

Conread position: 38-384
Cow position:
Alignm length: 358
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 80

Conread position: 41-362
Cow position:
Alignm length: 333
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 141

Conread position: 48-378
Cow position:
Alignm length: 338
Alignm identity: 224
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 143, 7

Conread position: 49-382
Cow position:
Alignm length: 345
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 35

Conread position: 55-371
Cow position:
Alignm length: 327
Alignm identity: 223
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 70, 262

Conread position: 62-382
Cow position:
Alignm length: 332
Alignm identity: 220
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 137, 16

Conread position: 79-363
Cow position:
Alignm length: 304
Alignm identity: 203
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 118, 0

Conread position: 79-382
Cow position:
Alignm length: 308
Alignm identity: 205
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 116, 87

Conread position: 79-385
Cow position:
Alignm length: 314
Alignm identity: 219
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 46, 10

Conread position: 79-427
Cow position:
Alignm length: 369
Alignm identity: 244
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 79, 37

Conread position: 98-381
Cow position:
Alignm length: 295
Alignm identity: 213
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 100, 58

Conread position: 98-382
Cow position:
Alignm length: 296
Alignm identity: 207
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 100, 89

Conread position: 113-381
Cow position:
Alignm length: 280
Alignm identity: 206
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 85, 64

Conread position: 124-382
Cow position:
Alignm length: 272
Alignm identity: 204
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 75, 46

Conread position: 128-382
Cow position:
Alignm length: 266
Alignm identity: 189
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 71, 49

Conread position: 129-333
Cow position:
Alignm length: 216
Alignm identity: 155
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 69, 40

Conread position: 129-382
Cow position:
Alignm length: 265
Alignm identity: 195
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 69, 48

Conread position: 134-349
Cow position:
Alignm length: 224
Alignm identity: 162
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 65, 41

Conread position: 135-382
Cow position:
Alignm length: 258
Alignm identity: 181
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 64, 14

Conread position: 153-384
Cow position:
Alignm length: 237
Alignm identity: 159
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 46, 12

Conread position: 153-384
Cow position:
Alignm length: 237
Alignm identity: 159
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 46, 12

Conread position: 172-382
Cow position:
Alignm length: 214
Alignm identity: 156
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 27, 118

Conread position: 187-381
Cow position:
Alignm length: 206
Alignm identity: 153
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 11, 192

Conread position: 200-382
Cow position:
Alignm length: 190
Alignm identity: 146
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 37, 103

Conread position: 209-342
Cow position:
Alignm length: 145
Alignm identity: 113
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 224-381
Cow position:
Alignm length: 161
Alignm identity: 122
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 64, 17

Conread position: 224-382
Cow position:
Alignm length: 162
Alignm identity: 125
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 64, 17

Conread position: 253-371
Cow position:
Alignm length: 122
Alignm identity: 98
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 26, 107

Show alignments to all cow chromosomes.