Cow genome map

Conread name: Ss1.1-Spl1-SPL01G040079.5

Conread position: 1-240
Cow position:
Alignm length: 242
Alignm identity: 173
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 194, 53

Conread position: 1-363
Cow position:
Alignm length: 373
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 36

Conread position: 1-369
Cow position:
Alignm length: 385
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 49

Conread position: 1-371
Cow position:
Alignm length: 389
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 73

Conread position: 1-371
Cow position:
Alignm length: 383
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 33

Conread position: 1-382
Cow position:
Alignm length: 392
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 33

Conread position: 1-382
Cow position:
Alignm length: 396
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 33

Conread position: 1-382
Cow position:
Alignm length: 392
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 33

Conread position: 1-382
Cow position:
Alignm length: 391
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 53

Conread position: 1-382
Cow position:
Alignm length: 391
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 33

Conread position: 1-382
Cow position:
Alignm length: 387
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 34

Conread position: 1-382
Cow position:
Alignm length: 395
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 176

Conread position: 1-382
Cow position:
Alignm length: 386
Alignm identity: 249
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 194, 33

Conread position: 1-382
Cow position:
Alignm length: 390
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 53

Conread position: 1-382
Cow position:
Alignm length: 394
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 53

Conread position: 1-382
Cow position:
Alignm length: 392
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 174

Conread position: 1-382
Cow position:
Alignm length: 394
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 182

Conread position: 1-382
Cow position:
Alignm length: 392
Alignm identity: 268
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 193, 110

Conread position: 1-382
Cow position:
Alignm length: 396
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 130

Conread position: 1-382
Cow position:
Alignm length: 395
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 165

Conread position: 1-382
Cow position:
Alignm length: 391
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 90

Conread position: 1-384
Cow position:
Alignm length: 392
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 31

Conread position: 1-384
Cow position:
Alignm length: 393
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 25

Conread position: 1-384
Cow position:
Alignm length: 395
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 32

Conread position: 1-413
Cow position:
Alignm length: 425
Alignm identity: 267
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 194, 33

Conread position: 2-382
Cow position:
Alignm length: 389
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 21

Conread position: 3-381
Cow position:
Alignm length: 383
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 163

Conread position: 3-381
Cow position:
Alignm length: 389
Alignm identity: 266
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 196, 33

Conread position: 3-381
Cow position:
Alignm length: 388
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 31

Conread position: 3-382
Cow position:
Alignm length: 392
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 115

Conread position: 3-382
Cow position:
Alignm length: 399
Alignm identity: 275
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 39, 169

Conread position: 3-382
Cow position:
Alignm length: 396
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 33

Conread position: 3-382
Cow position:
Alignm length: 397
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 31

Conread position: 3-382
Cow position:
Alignm length: 391
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 17

Conread position: 3-382
Cow position:
Alignm length: 394
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 177

Conread position: 3-382
Cow position:
Alignm length: 393
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 175

Conread position: 3-382
Cow position:
Alignm length: 405
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 163

Conread position: 3-384
Cow position:
Alignm length: 389
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 124

Conread position: 6-190
Cow position:
Alignm length: 185
Alignm identity: 133
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 135, 0

Conread position: 6-358
Cow position:
Alignm length: 370
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 48

Conread position: 6-371
Cow position:
Alignm length: 372
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 48

Conread position: 6-382
Cow position:
Alignm length: 388
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 30

Conread position: 6-382
Cow position:
Alignm length: 392
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 47

Conread position: 7-381
Cow position:
Alignm length: 385
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 29

Conread position: 7-384
Cow position:
Alignm length: 391
Alignm identity: 265
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 43, 27

Conread position: 9-194
Cow position:
Alignm length: 189
Alignm identity: 135
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 28, 107

Conread position: 9-340
Cow position:
Alignm length: 346
Alignm identity: 228
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 173, 28

Conread position: 9-363
Cow position:
Alignm length: 365
Alignm identity: 227
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 110, 45

Conread position: 9-365
Cow position:
Alignm length: 370
Alignm identity: 241
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 190, 25

Conread position: 9-369
Cow position:
Alignm length: 363
Alignm identity: 239
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 273, 45

Conread position: 9-371
Cow position:
Alignm length: 377
Alignm identity: 251
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 40, 85

Conread position: 9-378
Cow position:
Alignm length: 381
Alignm identity: 254
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 16, 41

Conread position: 9-382
Cow position:
Alignm length: 387
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 118

Conread position: 9-384
Cow position:
Alignm length: 398
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 27

Conread position: 10-388
Cow position:
Alignm length: 383
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 27

Conread position: 10-389
Cow position:
Alignm length: 382
Alignm identity: 257
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 97, 16

Conread position: 12-341
Cow position:
Alignm length: 339
Alignm identity: 229
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 29, 166

Conread position: 12-369
Cow position:
Alignm length: 372
Alignm identity: 260
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 14, 158

Conread position: 12-382
Cow position:
Alignm length: 374
Alignm identity: 252
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 185, 13

Conread position: 13-382
Cow position:
Alignm length: 381
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 23

Conread position: 16-384
Cow position:
Alignm length: 376
Alignm identity: 248
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 10, 80

Conread position: 17-382
Cow position:
Alignm length: 375
Alignm identity: 255
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 182, 16

Conread position: 17-382
Cow position:
Alignm length: 380
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 40

Conread position: 18-382
Cow position:
Alignm length: 371
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 33

Conread position: 20-212
Cow position:
Alignm length: 195
Alignm identity: 138
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 177, 56

Conread position: 20-358
Cow position:
Alignm length: 350
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 30

Conread position: 20-359
Cow position:
Alignm length: 350
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 48

Conread position: 25-366
Cow position:
Alignm length: 346
Alignm identity: 226
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 174, 115

Conread position: 30-341
Cow position:
Alignm length: 318
Alignm identity: 220
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 55, 147

Conread position: 38-382
Cow position:
Alignm length: 358
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 31

Conread position: 38-390
Cow position:
Alignm length: 365
Alignm identity: 210
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 156, 89

Conread position: 39-382
Cow position:
Alignm length: 351
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 74

Conread position: 39-382
Cow position:
Alignm length: 353
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 72

Conread position: 39-382
Cow position:
Alignm length: 351
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 53

Conread position: 40-381
Cow position:
Alignm length: 353
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 128

Conread position: 41-369
Cow position:
Alignm length: 334
Alignm identity: 222
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 69, 37

Conread position: 42-382
Cow position:
Alignm length: 346
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 134

Conread position: 48-384
Cow position:
Alignm length: 348
Alignm identity: 231
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 148, 118

Conread position: 61-411
Cow position:
Alignm length: 356
Alignm identity: 221
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 132, 105

Conread position: 97-381
Cow position:
Alignm length: 296
Alignm identity: 215
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 101, 80

Conread position: 98-381
Cow position:
Alignm length: 294
Alignm identity: 207
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 100, 57

Conread position: 98-381
Cow position:
Alignm length: 295
Alignm identity: 212
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 100, 79

Conread position: 102-381
Cow position:
Alignm length: 282
Alignm identity: 204
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 31, 79

Conread position: 102-381
Cow position:
Alignm length: 291
Alignm identity: 210
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 96, 75

Conread position: 110-382
Cow position:
Alignm length: 283
Alignm identity: 193
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 14, 24

Conread position: 113-333
Cow position:
Alignm length: 230
Alignm identity: 161
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 86, 16

Conread position: 116-370
Cow position:
Alignm length: 264
Alignm identity: 179
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 66, 60

Conread position: 119-370
Cow position:
Alignm length: 256
Alignm identity: 180
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 80, 26

Conread position: 125-382
Cow position:
Alignm length: 260
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 50

Conread position: 129-382
Cow position:
Alignm length: 262
Alignm identity: 190
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 70, 46

Conread position: 135-382
Cow position:
Alignm length: 261
Alignm identity: 189
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 9, 52

Conread position: 149-381
Cow position:
Alignm length: 244
Alignm identity: 181
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 49, 26

Conread position: 153-367
Cow position:
Alignm length: 229
Alignm identity: 172
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 46, 22

Conread position: 154-370
Cow position:
Alignm length: 229
Alignm identity: 165
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 44, 23

Conread position: 157-382
Cow position:
Alignm length: 237
Alignm identity: 177
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 41, 20

Conread position: 157-389
Cow position:
Alignm length: 248
Alignm identity: 177
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 42, 18

Conread position: 171-390
Cow position:
Alignm length: 226
Alignm identity: 162
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 71, 151

Conread position: 176-381
Cow position:
Alignm length: 217
Alignm identity: 161
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 22, 203

Conread position: 178-382
Cow position:
Alignm length: 210
Alignm identity: 156
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 20, 52

Conread position: 182-383
Cow position:
Alignm length: 210
Alignm identity: 156
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 17, 33

Conread position: 200-382
Cow position:
Alignm length: 185
Alignm identity: 145
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 41, 88

Conread position: 200-384
Cow position:
Alignm length: 200
Alignm identity: 146
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 42, 183

Conread position: 204-384
Cow position:
Alignm length: 184
Alignm identity: 139
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 29, 75

Conread position: 215-385
Cow position:
Alignm length: 173
Alignm identity: 127
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 164, 31

Conread position: 227-381
Cow position:
Alignm length: 158
Alignm identity: 116
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 61, 14

Conread position: 228-381
Cow position:
Alignm length: 155
Alignm identity: 121
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 52, 13

Conread position: 229-382
Cow position:
Alignm length: 155
Alignm identity: 113
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 66, 12

Conread position: 233-382
Cow position:
Alignm length: 152
Alignm identity: 115
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 62, 127

Conread position: 243-380
Cow position:
Alignm length: 138
Alignm identity: 106
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 125, 0

Conread position: 243-382
Cow position:
Alignm length: 145
Alignm identity: 112
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 18, 130

Conread position: 246-381
Cow position:
Alignm length: 141
Alignm identity: 114
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 36, 127

Conread position: 251-383
Cow position:
Alignm length: 135
Alignm identity: 112
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 32, 119

Conread position: 268-373
Cow position:
Alignm length: 106
Alignm identity: 86
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 19, 0

Show alignments to all cow chromosomes.