Cow genome map

Conread name: Ss1.1-Spl1-SPL01G040079.5

Conread position: 1-183
Cow position:
Alignm length: 185
Alignm identity: 131
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 124, 65

Conread position: 1-254
Cow position:
Alignm length: 264
Alignm identity: 192
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 32, 166

Conread position: 1-371
Cow position:
Alignm length: 383
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 53

Conread position: 1-371
Cow position:
Alignm length: 373
Alignm identity: 254
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 139, 62

Conread position: 1-377
Cow position:
Alignm length: 390
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 53

Conread position: 1-379
Cow position:
Alignm length: 394
Alignm identity: 271
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 194, 53

Conread position: 1-380
Cow position:
Alignm length: 391
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 32

Conread position: 1-381
Cow position:
Alignm length: 410
Alignm identity: 283
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 194, 32

Conread position: 1-382
Cow position:
Alignm length: 390
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 22

Conread position: 1-382
Cow position:
Alignm length: 391
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 32

Conread position: 1-382
Cow position:
Alignm length: 390
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 128

Conread position: 1-382
Cow position:
Alignm length: 409
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 33

Conread position: 1-382
Cow position:
Alignm length: 398
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 53

Conread position: 1-382
Cow position:
Alignm length: 398
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 174

Conread position: 1-382
Cow position:
Alignm length: 392
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 110

Conread position: 1-382
Cow position:
Alignm length: 394
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 35

Conread position: 1-382
Cow position:
Alignm length: 390
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 53

Conread position: 1-382
Cow position:
Alignm length: 408
Alignm identity: 279
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 35, 66

Conread position: 1-382
Cow position:
Alignm length: 394
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 53

Conread position: 1-382
Cow position:
Alignm length: 409
Alignm identity: 283
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 100, 53

Conread position: 1-383
Cow position:
Alignm length: 398
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 131

Conread position: 1-384
Cow position:
Alignm length: 393
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 53

Conread position: 1-384
Cow position:
Alignm length: 396
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 32

Conread position: 1-389
Cow position:
Alignm length: 402
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 53

Conread position: 1-389
Cow position:
Alignm length: 418
Alignm identity: 286
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 34, 168

Conread position: 1-389
Cow position:
Alignm length: 400
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 53

Conread position: 1-419
Cow position:
Alignm length: 430
Alignm identity: 282
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 150, 24

Conread position: 2-377
Cow position:
Alignm length: 383
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 34

Conread position: 2-382
Cow position:
Alignm length: 392
Alignm identity: 272
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 196, 31

Conread position: 2-382
Cow position:
Alignm length: 392
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 24

Conread position: 3-195
Cow position:
Alignm length: 193
Alignm identity: 132
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 3-269
Cow position:
Alignm length: 270
Alignm identity: 183
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 193, 33

Conread position: 3-381
Cow position:
Alignm length: 390
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 103

Conread position: 3-381
Cow position:
Alignm length: 392
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 30

Conread position: 3-381
Cow position:
Alignm length: 391
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 58

Conread position: 3-381
Cow position:
Alignm length: 390
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 33

Conread position: 3-381
Cow position:
Alignm length: 385
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 33

Conread position: 3-381
Cow position:
Alignm length: 388
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 33

Conread position: 3-381
Cow position:
Alignm length: 390
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 33

Conread position: 3-381
Cow position:
Alignm length: 389
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 33

Conread position: 3-381
Cow position:
Alignm length: 390
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 33

Conread position: 3-382
Cow position:
Alignm length: 389
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 34

Conread position: 3-382
Cow position:
Alignm length: 389
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 31

Conread position: 3-382
Cow position:
Alignm length: 391
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 34

Conread position: 3-386
Cow position:
Alignm length: 392
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 32

Conread position: 6-303
Cow position:
Alignm length: 310
Alignm identity: 213
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 13, 78

Conread position: 6-365
Cow position:
Alignm length: 367
Alignm identity: 251
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 118, 20

Conread position: 6-378
Cow position:
Alignm length: 379
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 27

Conread position: 6-382
Cow position:
Alignm length: 381
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 162

Conread position: 6-382
Cow position:
Alignm length: 388
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 48

Conread position: 6-389
Cow position:
Alignm length: 391
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 161

Conread position: 7-347
Cow position:
Alignm length: 360
Alignm identity: 243
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 188, 27

Conread position: 8-385
Cow position:
Alignm length: 394
Alignm identity: 252
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 74, 89

Conread position: 9-168
Cow position:
Alignm length: 161
Alignm identity: 116
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 114, 25

Conread position: 9-173
Cow position:
Alignm length: 165
Alignm identity: 117
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 9-360
Cow position:
Alignm length: 354
Alignm identity: 240
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 83, 41

Conread position: 9-363
Cow position:
Alignm length: 363
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 45

Conread position: 9-369
Cow position:
Alignm length: 374
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 24

Conread position: 9-373
Cow position:
Alignm length: 380
Alignm identity: 260
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 71, 28

Conread position: 9-375
Cow position:
Alignm length: 376
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 45

Conread position: 9-381
Cow position:
Alignm length: 384
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 27

Conread position: 9-382
Cow position:
Alignm length: 380
Alignm identity: 258
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 48, 16

Conread position: 9-382
Cow position:
Alignm length: 379
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 12

Conread position: 9-382
Cow position:
Alignm length: 382
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 24

Conread position: 9-411
Cow position:
Alignm length: 428
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 47

Conread position: 9-417
Cow position:
Alignm length: 429
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 41

Conread position: 9-424
Cow position:
Alignm length: 430
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 24

Conread position: 10-382
Cow position:
Alignm length: 383
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 24

Conread position: 10-382
Cow position:
Alignm length: 393
Alignm identity: 264
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 185, 107

Conread position: 11-370
Cow position:
Alignm length: 372
Alignm identity: 261
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 16, 42

Conread position: 11-371
Cow position:
Alignm length: 365
Alignm identity: 242
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 69, 24

Conread position: 12-367
Cow position:
Alignm length: 363
Alignm identity: 235
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 146, 93

Conread position: 15-381
Cow position:
Alignm length: 378
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 99

Conread position: 15-382
Cow position:
Alignm length: 378
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 151

Conread position: 16-388
Cow position:
Alignm length: 388
Alignm identity: 267
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 10, 72

Conread position: 18-360
Cow position:
Alignm length: 351
Alignm identity: 247
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 26, 131

Conread position: 18-382
Cow position:
Alignm length: 377
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 148

Conread position: 20-381
Cow position:
Alignm length: 380
Alignm identity: 259
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 176, 139

Conread position: 20-381
Cow position:
Alignm length: 373
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 95

Conread position: 20-382
Cow position:
Alignm length: 375
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 148

Conread position: 20-389
Cow position:
Alignm length: 391
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 146

Conread position: 23-382
Cow position:
Alignm length: 371
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 87

Conread position: 24-389
Cow position:
Alignm length: 375
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 30

Conread position: 28-382
Cow position:
Alignm length: 366
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 82

Conread position: 29-380
Cow position:
Alignm length: 364
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 81

Conread position: 30-381
Cow position:
Alignm length: 359
Alignm identity: 247
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 42, 152

Conread position: 37-382
Cow position:
Alignm length: 355
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 112

Conread position: 38-320
Cow position:
Alignm length: 290
Alignm identity: 202
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 157, 80

Conread position: 39-380
Cow position:
Alignm length: 352
Alignm identity: 245
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 43, 55

Conread position: 39-382
Cow position:
Alignm length: 354
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 71

Conread position: 39-382
Cow position:
Alignm length: 350
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 127

Conread position: 40-384
Cow position:
Alignm length: 361
Alignm identity: 251
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 79, 52

Conread position: 48-355
Cow position:
Alignm length: 321
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 97

Conread position: 48-377
Cow position:
Alignm length: 341
Alignm identity: 217
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 155, 76

Conread position: 48-413
Cow position:
Alignm length: 379
Alignm identity: 210
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 147, 118

Conread position: 49-384
Cow position:
Alignm length: 344
Alignm identity: 232
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 147, 20

Conread position: 60-382
Cow position:
Alignm length: 326
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 115

Conread position: 81-258
Cow position:
Alignm length: 182
Alignm identity: 128
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 24, 78

Conread position: 98-337
Cow position:
Alignm length: 251
Alignm identity: 179
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 98, 68

Conread position: 98-381
Cow position:
Alignm length: 295
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 79

Conread position: 98-389
Cow position:
Alignm length: 313
Alignm identity: 225
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 31, 80

Conread position: 104-382
Cow position:
Alignm length: 291
Alignm identity: 201
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 94, 73

Conread position: 105-382
Cow position:
Alignm length: 284
Alignm identity: 189
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 24, 209

Conread position: 112-382
Cow position:
Alignm length: 284
Alignm identity: 200
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 11, 67

Conread position: 113-373
Cow position:
Alignm length: 263
Alignm identity: 183
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 84, 62

Conread position: 114-359
Cow position:
Alignm length: 257
Alignm identity: 176
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 82, 16

Conread position: 114-388
Cow position:
Alignm length: 286
Alignm identity: 196
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 85, 63

Conread position: 118-381
Cow position:
Alignm length: 275
Alignm identity: 199
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 80, 59

Conread position: 151-382
Cow position:
Alignm length: 241
Alignm identity: 179
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 90, 23

Conread position: 157-382
Cow position:
Alignm length: 230
Alignm identity: 164
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 39, 18

Conread position: 159-382
Cow position:
Alignm length: 233
Alignm identity: 179
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 39, 17

Conread position: 176-380
Cow position:
Alignm length: 212
Alignm identity: 159
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 23, 39

Conread position: 179-382
Cow position:
Alignm length: 207
Alignm identity: 158
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 62, 18

Conread position: 180-382
Cow position:
Alignm length: 210
Alignm identity: 151
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 19, 158

Conread position: 197-381
Cow position:
Alignm length: 194
Alignm identity: 146
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 45, 180

Conread position: 206-370
Cow position:
Alignm length: 176
Alignm identity: 130
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 252-393
Cow position:
Alignm length: 143
Alignm identity: 113
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 47, 41

Conread position: 257-384
Cow position:
Alignm length: 131
Alignm identity: 103
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 31, 114

Conread position: 268-370
Cow position:
Alignm length: 106
Alignm identity: 90
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 276-382
Cow position:
Alignm length: 107
Alignm identity: 86
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 89, 0

Show alignments to all cow chromosomes.