Cow genome map
| Conread name: | Ss1.1-Spl1-SPL01G040079.5 |
| Conread position: | 1-354 |
| Cow position: | |
| Alignm length: | 367 |
| Alignm identity: | 257 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 48, 110 |
| Conread position: | 1-360 |
| Cow position: | |
| Alignm length: | 372 |
| Alignm identity: | 261 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 112, 50 |
| Conread position: | 1-380 |
| Cow position: | |
| Alignm length: | 398 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 53 |
| Conread position: | 1-382 |
| Cow position: | |
| Alignm length: | 394 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 50 |
| Conread position: | 1-382 |
| Cow position: | |
| Alignm length: | 385 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 53 |
| Conread position: | 1-382 |
| Cow position: | |
| Alignm length: | 394 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 53 |
| Conread position: | 1-382 |
| Cow position: | |
| Alignm length: | 397 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 140 |
| Conread position: | 1-382 |
| Cow position: | |
| Alignm length: | 393 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 198, 32 |
| Conread position: | 1-382 |
| Cow position: | |
| Alignm length: | 382 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 1-382 |
| Cow position: | |
| Alignm length: | 392 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 49 |
| Conread position: | 1-382 |
| Cow position: | |
| Alignm length: | 395 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 166 |
| Conread position: | 1-382 |
| Cow position: | |
| Alignm length: | 394 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 175 |
| Conread position: | 1-382 |
| Cow position: | |
| Alignm length: | 389 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 198, 50 |
| Conread position: | 1-382 |
| Cow position: | |
| Alignm length: | 394 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 32 |
| Conread position: | 1-382 |
| Cow position: | |
| Alignm length: | 401 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 171 |
| Conread position: | 1-382 |
| Cow position: | |
| Alignm length: | 399 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 53 |
| Conread position: | 1-382 |
| Cow position: | |
| Alignm length: | 396 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 198, 53 |
| Conread position: | 1-382 |
| Cow position: | |
| Alignm length: | 395 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 33 |
| Conread position: | 1-382 |
| Cow position: | |
| Alignm length: | 390 |
| Alignm identity: | 268 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 194, 53 |
| Conread position: | 1-382 |
| Cow position: | |
| Alignm length: | 390 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 53 |
| Conread position: | 1-382 |
| Cow position: | |
| Alignm length: | 393 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 198, 32 |
| Conread position: | 1-382 |
| Cow position: | |
| Alignm length: | 393 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 32 |
| Conread position: | 1-383 |
| Cow position: | |
| Alignm length: | 391 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 50 |
| Conread position: | 1-383 |
| Cow position: | |
| Alignm length: | 397 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 198, 85 |
| Conread position: | 1-389 |
| Cow position: | |
| Alignm length: | 398 |
| Alignm identity: | 263 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 157, 49 |
| Conread position: | 1-389 |
| Cow position: | |
| Alignm length: | 394 |
| Alignm identity: | 265 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 134, 21 |
| Conread position: | 2-382 |
| Cow position: | |
| Alignm length: | 386 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 53 |
| Conread position: | 3-245 |
| Cow position: | |
| Alignm length: | 246 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 193, 33 |
| Conread position: | 3-258 |
| Cow position: | |
| Alignm length: | 259 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 193, 174 |
| Conread position: | 3-370 |
| Cow position: | |
| Alignm length: | 375 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 51 |
| Conread position: | 3-377 |
| Cow position: | |
| Alignm length: | 383 |
| Alignm identity: | 259 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 221, 31 |
| Conread position: | 3-380 |
| Cow position: | |
| Alignm length: | 388 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 197, 31 |
| Conread position: | 3-381 |
| Cow position: | |
| Alignm length: | 390 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 31 |
| Conread position: | 3-381 |
| Cow position: | |
| Alignm length: | 391 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 51 |
| Conread position: | 3-381 |
| Cow position: | |
| Alignm length: | 391 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 33 |
| Conread position: | 3-381 |
| Cow position: | |
| Alignm length: | 390 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 33 |
| Conread position: | 3-382 |
| Cow position: | |
| Alignm length: | 391 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 49 |
| Conread position: | 3-384 |
| Cow position: | |
| Alignm length: | 410 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 32 |
| Conread position: | 3-437 |
| Cow position: | |
| Alignm length: | 455 |
| Alignm identity: | 286 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 195, 33 |
| Conread position: | 6-238 |
| Cow position: | |
| Alignm length: | 235 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 190, 30 |
| Conread position: | 6-380 |
| Cow position: | |
| Alignm length: | 385 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 30 |
| Conread position: | 6-381 |
| Cow position: | |
| Alignm length: | 385 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 27 |
| Conread position: | 6-382 |
| Cow position: | |
| Alignm length: | 403 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 75 |
| Conread position: | 6-382 |
| Cow position: | |
| Alignm length: | 389 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 161 |
| Conread position: | 6-382 |
| Cow position: | |
| Alignm length: | 385 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 30 |
| Conread position: | 6-390 |
| Cow position: | |
| Alignm length: | 394 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 170 |
| Conread position: | 9-195 |
| Cow position: | |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 93, 25 |
| Conread position: | 9-346 |
| Cow position: | |
| Alignm length: | 353 |
| Alignm identity: | 242 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 16, 46 |
| Conread position: | 9-346 |
| Cow position: | |
| Alignm length: | 348 |
| Alignm identity: | 236 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 192, 45 |
| Conread position: | 9-352 |
| Cow position: | |
| Alignm length: | 364 |
| Alignm identity: | 242 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 123, 45 |
| Conread position: | 9-360 |
| Cow position: | |
| Alignm length: | 356 |
| Alignm identity: | 236 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 78, 41 |
| Conread position: | 9-367 |
| Cow position: | |
| Alignm length: | 368 |
| Alignm identity: | 236 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 190, 41 |
| Conread position: | 9-367 |
| Cow position: | |
| Alignm length: | 385 |
| Alignm identity: | 256 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 120, 25 |
| Conread position: | 9-368 |
| Cow position: | |
| Alignm length: | 371 |
| Alignm identity: | 241 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 21, 13 |
| Conread position: | 9-378 |
| Cow position: | |
| Alignm length: | 384 |
| Alignm identity: | 261 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 101, 45 |
| Conread position: | 9-382 |
| Cow position: | |
| Alignm length: | 406 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 180 |
| Conread position: | 9-382 |
| Cow position: | |
| Alignm length: | 382 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 149 |
| Conread position: | 9-382 |
| Cow position: | |
| Alignm length: | 388 |
| Alignm identity: | 262 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 189, 45 |
| Conread position: | 9-382 |
| Cow position: | |
| Alignm length: | 386 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 24 |
| Conread position: | 9-382 |
| Cow position: | |
| Alignm length: | 384 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 157 |
| Conread position: | 9-390 |
| Cow position: | |
| Alignm length: | 395 |
| Alignm identity: | 262 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 186, 43 |
| Conread position: | 10-351 |
| Cow position: | |
| Alignm length: | 353 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 13 |
| Conread position: | 11-380 |
| Cow position: | |
| Alignm length: | 380 |
| Alignm identity: | 260 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 9, 153 |
| Conread position: | 11-381 |
| Cow position: | |
| Alignm length: | 386 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 166 |
| Conread position: | 12-376 |
| Cow position: | |
| Alignm length: | 379 |
| Alignm identity: | 263 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 187, 137 |
| Conread position: | 12-382 |
| Cow position: | |
| Alignm length: | 379 |
| Alignm identity: | 258 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 98, 42 |
| Conread position: | 12-389 |
| Cow position: | |
| Alignm length: | 394 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 14 |
| Conread position: | 13-383 |
| Cow position: | |
| Alignm length: | 379 |
| Alignm identity: | 237 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 18, 327 |
| Conread position: | 17-381 |
| Cow position: | |
| Alignm length: | 380 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 17 |
| Conread position: | 18-382 |
| Cow position: | |
| Alignm length: | 374 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 157 |
| Conread position: | 21-381 |
| Cow position: | |
| Alignm length: | 378 |
| Alignm identity: | 258 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 35, 162 |
| Conread position: | 23-373 |
| Cow position: | |
| Alignm length: | 364 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 141 |
| Conread position: | 24-381 |
| Cow position: | |
| Alignm length: | 370 |
| Alignm identity: | 256 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 172, 62 |
| Conread position: | 24-382 |
| Cow position: | |
| Alignm length: | 369 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 144 |
| Conread position: | 24-384 |
| Cow position: | |
| Alignm length: | 377 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 40 |
| Conread position: | 38-340 |
| Cow position: | |
| Alignm length: | 312 |
| Alignm identity: | 217 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 161, 79 |
| Conread position: | 39-359 |
| Cow position: | |
| Alignm length: | 331 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 78, 129 |
| Conread position: | 40-371 |
| Cow position: | |
| Alignm length: | 347 |
| Alignm identity: | 235 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 77, 158 |
| Conread position: | 42-378 |
| Cow position: | |
| Alignm length: | 343 |
| Alignm identity: | 228 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 44, 126 |
| Conread position: | 44-382 |
| Cow position: | |
| Alignm length: | 341 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 74 |
| Conread position: | 44-382 |
| Cow position: | |
| Alignm length: | 350 |
| Alignm identity: | 245 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 155, 22 |
| Conread position: | 48-382 |
| Cow position: | |
| Alignm length: | 354 |
| Alignm identity: | 245 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 151, 127 |
| Conread position: | 49-381 |
| Cow position: | |
| Alignm length: | 344 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 128 |
| Conread position: | 58-294 |
| Cow position: | |
| Alignm length: | 246 |
| Alignm identity: | 166 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 128, 40 |
| Conread position: | 71-391 |
| Cow position: | |
| Alignm length: | 333 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 106 |
| Conread position: | 79-342 |
| Cow position: | |
| Alignm length: | 269 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 166, 46 |
| Conread position: | 81-222 |
| Cow position: | |
| Alignm length: | 144 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 112, 85 |
| Conread position: | 88-381 |
| Cow position: | |
| Alignm length: | 301 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 106, 17 |
| Conread position: | 98-381 |
| Cow position: | |
| Alignm length: | 295 |
| Alignm identity: | 209 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 100, 79 |
| Conread position: | 98-381 |
| Cow position: | |
| Alignm length: | 296 |
| Alignm identity: | 209 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 100, 61 |
| Conread position: | 98-382 |
| Cow position: | |
| Alignm length: | 293 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 100, 50 |
| Conread position: | 98-389 |
| Cow position: | |
| Alignm length: | 303 |
| Alignm identity: | 213 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 105, 52 |
| Conread position: | 101-381 |
| Cow position: | |
| Alignm length: | 292 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 76 |
| Conread position: | 104-378 |
| Cow position: | |
| Alignm length: | 280 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 94, 72 |
| Conread position: | 106-382 |
| Cow position: | |
| Alignm length: | 280 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 38, 11 |
| Conread position: | 110-382 |
| Cow position: | |
| Alignm length: | 277 |
| Alignm identity: | 200 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 91, 67 |
| Conread position: | 116-383 |
| Cow position: | |
| Alignm length: | 280 |
| Alignm identity: | 201 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 28, 18 |
| Conread position: | 137-382 |
| Cow position: | |
| Alignm length: | 257 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 62, 40 |
| Conread position: | 155-381 |
| Cow position: | |
| Alignm length: | 238 |
| Alignm identity: | 174 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 43, 22 |
| Conread position: | 175-383 |
| Cow position: | |
| Alignm length: | 218 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 24, 11 |
| Conread position: | 177-345 |
| Cow position: | |
| Alignm length: | 174 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 18, 59 |
| Conread position: | 182-359 |
| Cow position: | |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 182-382 |
| Cow position: | |
| Alignm length: | 201 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 183-382 |
| Cow position: | |
| Alignm length: | 202 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 18, 127 |
| Conread position: | 201-384 |
| Cow position: | |
| Alignm length: | 189 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 41, 13 |
| Conread position: | 224-381 |
| Cow position: | |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 64, 17 |
| Conread position: | 228-382 |
| Cow position: | |
| Alignm length: | 158 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 54, 13 |
| Conread position: | 228-384 |
| Cow position: | |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 54, 13 |
| Conread position: | 235-382 |
| Cow position: | |
| Alignm length: | 149 |
| Alignm identity: | 111 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 108, 15 |
| Conread position: | 252-382 |
| Cow position: | |
| Alignm length: | 133 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 28, 15 |
| Conread position: | 267-382 |
| Cow position: | |
| Alignm length: | 119 |
| Alignm identity: | 95 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 21, 104 |
Show alignments to all cow chromosomes.