Cow genome map
| Conread name: | Ss1.1-Spl1-SPL01H050086.5 |
| Conread position: | 81-381 |
| Cow position: | chr23:23177867-23177569 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 210 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 85, 13 |
| Conread position: | 94-366 |
| Cow position: | chr23:23096967-23096696 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 99-366 |
| Cow position: | chr23:20551142-20551409 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 99-366 |
| Cow position: | chr23:21180741-21180474 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 99-366 |
| Cow position: | chr23:23022929-23022662 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 203 |
| Conread position: | 99-366 |
| Cow position: | chr23:23049471-23049204 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 203 |
| Conread position: | 357-641 |
| Cow position: | chr23:21180287-21180003 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 357-641 |
| Cow position: | chr23:23022459-23022176 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 357-641 |
| Cow position: | chr23:23049041-23048757 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 357-641 |
| Cow position: | chr23:23096509-23096228 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 30 |
| Conread position: | 358-641 |
| Cow position: | chr23:20551600-20551882 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 358-641 |
| Cow position: | chr23:23177323-23177038 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 157 |
| Conread position: | 424-641 |
| Cow position: | chr23:24589535-24589754 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 43, 67 |
| Conread position: | 639-792 |
| Cow position: | chr23:20553184-20553337 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 136 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 639-792 |
| Cow position: | chr23:21000454-21000607 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 130 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 639-792 |
| Cow position: | chr23:21179119-21178966 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 133 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 639-792 |
| Cow position: | chr23:23021253-23021100 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 639-792 |
| Cow position: | chr23:23048188-23048035 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 135 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 639-792 |
| Cow position: | chr23:23093772-23093619 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 136 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 639-792 |
| Cow position: | chr23:23176142-23175989 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 130 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 640-792 |
| Cow position: | chr23:24591581-24591730 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 86, 0 |
Show alignments to all cow chromosomes.