Cow genome map


           Conread name:
           Ss1.1-Tes1-TES01A020009.5.5
        

               Conread position:
               14-341
               

               Cow position:
               chr7:8403672-8403355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               341-510
               

               Cow position:
               chr7:8402780-8402611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               158
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               506-629
               

               Cow position:
               chr7:8402424-8402301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               120
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               626-726
               

               Cow position:
               chr7:8402217-8402117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               98
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               724-812
               

               Cow position:
               chr7:8402040-8401952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               89
               

               Alignm identity:
               83
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               811-918
               

               Cow position:
               chr7:8401524-8401417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               103
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               918-1035
               

               Cow position:
               chr7:8401337-8401220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1022-1150
               

               Cow position:
               chr7:8400396-8400268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               121
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1147-1368
               

               Cow position:
               chr7:8400187-8399969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 167
               
Show alignments to all cow chromosomes.