Cow genome map
| Conread name: | Ss1.1-Tes1-TES01A040018.5 |
| Conread position: | 404-555 |
| Cow position: | chrX:48470398-48470549 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 553-678 |
| Cow position: | chrX:48447238-48447113 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 553-683 |
| Cow position: | chrX:48471735-48471864 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 553-689 |
| Cow position: | chrX:48487460-48487597 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 799-1198 |
| Cow position: | chrX:48491033-48491432 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 246 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 120, 96 |
| Conread position: | 799-1223 |
| Cow position: | chrX:48475070-48475497 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 234, 281 |
| Conread position: | 1222-1361 |
| Cow position: | chrX:48476093-48476232 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 123 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1222-1361 |
| Cow position: | chrX:48492328-48492467 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1360-1498 |
| Cow position: | chrX:48477035-48477173 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1487-1659 |
| Cow position: | chrX:48477622-48477794 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 153 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1494-1659 |
| Cow position: | chrX:48493511-48493676 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 152 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1515-1659 |
| Cow position: | chrX:45946412-45946268 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 128, 118 |
| Conread position: | 1656-1781 |
| Cow position: | chrX:48480008-48480133 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1786-2130 |
| Cow position: | chrX:48435990-48435649 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 238 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 173, 84 |
| Conread position: | 1787-2167 |
| Cow position: | chrX:48480680-48481060 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 69 |
Show alignments to all cow chromosomes.