Cow genome map


           Conread name:
           Ss1.1-Tes1-TES01A060035.5.5
        

               Conread position:
               60-248
               

               Cow position:
               chr3:71724654-71724842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               176
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               244-397
               

               Cow position:
               chr3:71724952-71725105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               140
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               395-495
               

               Cow position:
               chr3:71725189-71725289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               493-622
               

               Cow position:
               chr3:71725447-71725576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               120
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               623-819
               

               Cow position:
               chr3:71725677-71725873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               818-914
               

               Cow position:
               chr3:71725982-71726078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               97
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               912-1144
               

               Cow position:
               chr3:71726213-71726445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1142-1271
               

               Cow position:
               chr3:71726600-71726729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               124
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1267-1389
               

               Cow position:
               chr3:71727622-71727744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               118
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1386-1632
               

               Cow position:
               chr3:71728090-71728338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               222, 196
               
Show alignments to all cow chromosomes.