Cow genome map


           Conread name:
           Ss1.1-Tes1-TES01A060104.5.5
        

               Conread position:
               51-244
               

               Cow position:
               chr3:71731121-71730913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               14, 84
               

               Conread position:
               325-427
               

               Cow position:
               chr3:71733311-71733209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               94
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               486-678
               

               Cow position:
               chr3:71730515-71730323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               677-759
               

               Cow position:
               chr3:71730105-71730023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               83
               

               Alignm identity:
               77
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               818-923
               

               Cow position:
               chr3:71729751-71729646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               95
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               920-1061
               

               Cow position:
               chr3:71729567-71729426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               135
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1061-1776
               

               Cow position:
               chr3:71729258-71728525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               734
               

               Alignm identity:
               627
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               311, 0
               
Show alignments to all cow chromosomes.