Cow genome map


           Conread name:
           Ss1.1-Tes1-TES01B020013.5.5
        

               Conread position:
               14-157
               

               Cow position:
               chr29:45573632-45573489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               156-234
               

               Cow position:
               chr29:45572237-45572159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               79
               

               Alignm identity:
               77
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               368-457
               

               Cow position:
               chr29:45500081-45500170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               90
               

               Alignm identity:
               77
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               455-628
               

               Cow position:
               chr29:45500642-45500815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               156
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               627-707
               

               Cow position:
               chr29:45501797-45501877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               81
               

               Alignm identity:
               73
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               709-834
               

               Cow position:
               chr29:45501955-45502080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               121
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               896-980
               

               Cow position:
               chr29:45503116-45503200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               85
               

               Alignm identity:
               80
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               977-1109
               

               Cow position:
               chr29:45503438-45503570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               120
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1087-1445
               

               Cow position:
               chr29:45504116-45504480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 166
               
Show alignments to all cow chromosomes.