Cow genome map


           Conread name:
           Ss1.1-Tes1-TES01C090004.5.5
        

               Conread position:
               1-140
               

               Cow position:
               chr5:60395149-60395010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               121
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               140-264
               

               Cow position:
               chr5:60393889-60393765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               120
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               263-349
               

               Cow position:
               chr5:60393651-60393565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               87
               

               Alignm identity:
               83
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               348-485
               

               Cow position:
               chr5:60393488-60393351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               132
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               480-569
               

               Cow position:
               chr5:60393082-60392993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               90
               

               Alignm identity:
               82
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               567-657
               

               Cow position:
               chr5:60392612-60392522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               91
               

               Alignm identity:
               86
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               656-1333
               

               Cow position:
               chr5:60392392-60391721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               686
               

               Alignm identity:
               561
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 132
               
Show alignments to all cow chromosomes.