Cow genome map


           Conread name:
           Ss1.1-Tes1-TES01E020013.5.5
        

               Conread position:
               86-244
               

               Cow position:
               chr25:1073051-1072892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               139
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               234-353
               

               Cow position:
               chr25:1072589-1072470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               350-536
               

               Cow position:
               chr25:1071916-1071730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               162
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               534-688
               

               Cow position:
               chr25:1071586-1071432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               135
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               676-791
               

               Cow position:
               chr25:1070998-1070883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               94
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               93, 11
               

               Conread position:
               835-1041
               

               Cow position:
               chr25:1061160-1060953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               177
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               1105-1255
               

               Cow position:
               chr25:1048473-1048323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               137
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1263-1587
               

               Cow position:
               chr25:1027781-1027455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               199, 312
               

               Conread position:
               1575-1747
               

               Cow position:
               chr25:1021712-1021534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               147
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               89, 0
               
Show alignments to all cow chromosomes.