Cow genome map
| Conread name: | Ss1.1-Tes1-TES01E030002.5 | 
| Conread position: | 15-411 | 
| Cow position: | chr3:9594912-9595321 (view UCSC Genome Browser custom track) | 
| Alignm length: | 410 | 
| Alignm identity: | 316 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 220, 0 | 
| Conread position: | 396-538 | 
| Cow position: | chr3:9596406-9596548 (view UCSC Genome Browser custom track) | 
| Alignm length: | 143 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 618-742 | 
| Cow position: | chr3:9600615-9600739 (view UCSC Genome Browser custom track) | 
| Alignm length: | 125 | 
| Alignm identity: | 113 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 741-833 | 
| Cow position: | chr3:9601112-9601204 (view UCSC Genome Browser custom track) | 
| Alignm length: | 93 | 
| Alignm identity: | 80 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 904-983 | 
| Cow position: | chr3:9602060-9602139 (view UCSC Genome Browser custom track) | 
| Alignm length: | 80 | 
| Alignm identity: | 75 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 980-1118 | 
| Cow position: | chr3:9602237-9602375 (view UCSC Genome Browser custom track) | 
| Alignm length: | 139 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 1111-1370 | 
| Cow position: | chr3:9602892-9603155 (view UCSC Genome Browser custom track) | 
| Alignm length: | 264 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 218, 0 | 
Show alignments to all cow chromosomes.
