Cow genome map


           Conread name:
           Ss1.1-Tes1-TES01E110086.5
        

               Conread position:
               310-465
               

               Cow position:
               chr11:55010869-55010717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               58, 35
               

               Conread position:
               310-520
               

               Cow position:
               chr11:5251912-5251708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               59, 23
               

               Conread position:
               310-520
               

               Cow position:
               chr11:6604952-6605158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               59, 44
               

               Conread position:
               310-532
               

               Cow position:
               chr11:42471874-42471653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               212, 44
               

               Conread position:
               310-584
               

               Cow position:
               chr11:5188363-5188635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               173, 29
               

               Conread position:
               356-520
               

               Cow position:
               chr11:5144314-5144149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               13, 157
               

               Conread position:
               358-517
               

               Cow position:
               chr11:33280055-33280212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               10, 122
               
Show alignments to all cow chromosomes.