Cow genome map


           Conread name:
           Ss1.1-Tes1-TES01E110086.5
        

               Conread position:
               310-466
               

               Cow position:
               chr17:38874887-38875040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               115
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               55, 35
               

               Conread position:
               310-470
               

               Cow position:
               chr17:17641897-17642055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               58, 33
               

               Conread position:
               310-483
               

               Cow position:
               chr17:891943-892113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               56, 35
               

               Conread position:
               310-517
               

               Cow position:
               chr17:17449206-17449413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               146
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               58, 35
               

               Conread position:
               310-520
               

               Cow position:
               chr17:21460962-21460751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               58, 44
               

               Conread position:
               310-526
               

               Cow position:
               chr17:23564983-23564770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               59, 35
               

               Conread position:
               312-520
               

               Cow position:
               chr17:6763094-6762889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               56, 37
               

               Conread position:
               320-475
               

               Cow position:
               chr17:25546279-25546431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               46, 25
               

               Conread position:
               324-466
               

               Cow position:
               chr17:11124683-11124821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               43, 25
               
Show alignments to all cow chromosomes.