Cow genome map
| Conread name: | Ss1.1-Tes1-TES01F020053.5 |
| Conread position: | 227-395 |
| Cow position: | chr5:4457631-4457462 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 38, 19 |
| Conread position: | 227-429 |
| Cow position: | chr5:14350941-14350743 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 38, 47 |
| Conread position: | 227-440 |
| Cow position: | chr5:13981933-13982148 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 39, 119 |
| Conread position: | 228-441 |
| Cow position: | chr5:44898316-44898529 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 54, 117 |
| Conread position: | 229-412 |
| Cow position: | chr5:67156151-67155968 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 36, 95 |
| Conread position: | 229-439 |
| Cow position: | chr5:53426553-53426343 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 36, 117 |
| Conread position: | 231-439 |
| Cow position: | chr5:31274648-31274442 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 53, 36 |
| Conread position: | 232-436 |
| Cow position: | chr5:67184985-67184780 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 29, 114 |
| Conread position: | 234-447 |
| Cow position: | chr5:50559059-50558847 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 47, 7 |
| Conread position: | 254-441 |
| Cow position: | chr5:16207236-16207427 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 275-441 |
| Cow position: | chr5:46359701-46359539 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 278-428 |
| Cow position: | chr5:68855517-68855667 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 96, 65 |
| Conread position: | 278-441 |
| Cow position: | chr5:24093403-24093245 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 278-468 |
| Cow position: | chr5:29792351-29792166 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 186, 65 |
| Conread position: | 289-441 |
| Cow position: | chr5:35628845-35628996 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 104, 55 |
Show alignments to all cow chromosomes.