Cow genome map
| Conread name: | Ss1.1-Tes1-TES01F080049.5 |
| Conread position: | 71-351 |
| Cow position: | chr23:23177867-23177592 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 196 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 242, 13 |
| Conread position: | 85-356 |
| Cow position: | chr23:20551138-20551409 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 85-356 |
| Cow position: | chr23:21180745-21180474 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 85-356 |
| Cow position: | chr23:23022933-23022662 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 214, 194 |
| Conread position: | 85-356 |
| Cow position: | chr23:23049475-23049204 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 214, 193 |
| Conread position: | 85-356 |
| Cow position: | chr23:23096967-23096696 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 347-631 |
| Cow position: | chr23:21180287-21180003 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 347-631 |
| Cow position: | chr23:23022459-23022176 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 347-631 |
| Cow position: | chr23:23049041-23048757 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 347-631 |
| Cow position: | chr23:23096509-23096228 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 348-631 |
| Cow position: | chr23:20551600-20551882 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 348-631 |
| Cow position: | chr23:23177323-23177038 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 157 |
| Conread position: | 428-631 |
| Cow position: | chr23:24589549-24589754 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 29, 53 |
| Conread position: | 629-739 |
| Cow position: | chr23:23048188-23048078 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 629-740 |
| Cow position: | chr23:21000454-21000565 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 95 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 629-740 |
| Cow position: | chr23:21179119-21179008 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 98 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 629-743 |
| Cow position: | chr23:20553184-20553298 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 629-743 |
| Cow position: | chr23:23021253-23021139 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 629-743 |
| Cow position: | chr23:23093772-23093658 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 629-743 |
| Cow position: | chr23:23176142-23176028 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 630-739 |
| Cow position: | chr23:24591581-24591687 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 95 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 86, 0 |
Show alignments to all cow chromosomes.