Cow genome map
| Conread name: | Ss1.1-Thy1-THY010003G05.5 |
| Conread position: | 82-238 |
| Cow position: | chr1:96378389-96378556 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 72, 86 |
| Conread position: | 370-850 |
| Cow position: | chr1:85791222-85790748 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 201, 0 |
| Conread position: | 371-631 |
| Cow position: | chr1:62806250-62806511 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 141, 12 |
| Conread position: | 371-849 |
| Cow position: | chr1:102548716-102548257 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 7 |
| Conread position: | 371-850 |
| Cow position: | chr1:43019650-43019169 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 306 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 146, 141 |
| Conread position: | 372-524 |
| Cow position: | chr1:23050196-23050045 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 372-524 |
| Cow position: | chr1:25887574-25887725 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 372-537 |
| Cow position: | chr1:76703795-76703959 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 372-600 |
| Cow position: | chr1:18406617-18406843 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 372-649 |
| Cow position: | chr1:101858407-101858682 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 197 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 234, 10 |
| Conread position: | 372-850 |
| Cow position: | chr1:17037032-17037500 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 230, 76 |
| Conread position: | 374-522 |
| Cow position: | chr1:72134989-72134839 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 374-832 |
| Cow position: | chr1:40513946-40514389 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 231, 6 |
| Conread position: | 375-632 |
| Cow position: | chr1:76545988-76546252 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 103, 231 |
| Conread position: | 375-632 |
| Cow position: | chr1:76623394-76623659 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 137, 232 |
| Conread position: | 375-847 |
| Cow position: | chr1:37455265-37454794 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 351 |
| Conread position: | 375-850 |
| Cow position: | chr1:30284075-30284551 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 298 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 224, 216 |
| Conread position: | 375-850 |
| Cow position: | chr1:58223818-58223353 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 226, 77 |
| Conread position: | 375-850 |
| Cow position: | chr1:86548605-86549080 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 115 |
| Conread position: | 378-492 |
| Cow position: | chr1:87208081-87208195 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 95 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 382-495 |
| Cow position: | chr1:37420431-37420544 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 382-521 |
| Cow position: | chr1:52233533-52233672 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 382-534 |
| Cow position: | chr1:62854267-62854419 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 382-647 |
| Cow position: | chr1:33711613-33711347 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 193 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 46, 183 |
| Conread position: | 382-647 |
| Cow position: | chr1:55323984-55324250 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 79 |
| Conread position: | 382-649 |
| Cow position: | chr1:42289972-42289707 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 186 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 154, 0 |
| Conread position: | 382-649 |
| Cow position: | chr1:89900137-89900399 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 144, 127 |
| Conread position: | 382-651 |
| Cow position: | chr1:13645286-13645022 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 267, 154 |
| Conread position: | 382-883 |
| Cow position: | chr1:89771353-89771849 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 264, 127 |
| Conread position: | 382-891 |
| Cow position: | chr1:18244844-18245355 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 225, 85 |
| Conread position: | 382-1017 |
| Cow position: | chr1:67286049-67285399 (view UCSC Genome Browser custom track) |
| Alignm length: | 657 |
| Alignm identity: | 471 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 379 |
| Conread position: | 383-603 |
| Cow position: | chr1:38414382-38414163 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 153, 175 |
| Conread position: | 383-632 |
| Cow position: | chr1:82919098-82919346 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 160, 175 |
| Conread position: | 383-651 |
| Cow position: | chr1:45097147-45096880 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 190 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 154, 0 |
| Conread position: | 383-651 |
| Cow position: | chr1:69536479-69536217 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 383-651 |
| Cow position: | chr1:101149395-101149134 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 384-510 |
| Cow position: | chr1:62245109-62245235 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 116, 108 |
| Conread position: | 384-522 |
| Cow position: | chr1:52323441-52323304 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 384-523 |
| Cow position: | chr1:34688894-34688760 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 384-534 |
| Cow position: | chr1:31344831-31344980 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 384-534 |
| Cow position: | chr1:61732595-61732453 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 384-559 |
| Cow position: | chr1:42735998-42735817 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 116, 110 |
| Conread position: | 384-559 |
| Cow position: | chr1:85881292-85881111 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 384-562 |
| Cow position: | chr1:25549604-25549422 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 128, 21 |
| Conread position: | 384-562 |
| Cow position: | chr1:93854062-93853880 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 92, 83 |
| Conread position: | 384-562 |
| Cow position: | chr1:99910098-99909920 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 116, 39 |
| Conread position: | 384-565 |
| Cow position: | chr1:72980823-72980635 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 116, 110 |
| Conread position: | 384-589 |
| Cow position: | chr1:11863737-11863940 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 197, 0 |
| Conread position: | 384-599 |
| Cow position: | chr1:72080023-72079802 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 384-605 |
| Cow position: | chr1:8027634-8027854 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 207, 0 |
| Conread position: | 384-631 |
| Cow position: | chr1:22000411-22000657 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 134, 213 |
| Conread position: | 384-631 |
| Cow position: | chr1:57367591-57367845 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 116, 108 |
| Conread position: | 384-631 |
| Cow position: | chr1:69402534-69402283 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 117, 110 |
| Conread position: | 384-631 |
| Cow position: | chr1:76753108-76753359 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 130, 217 |
| Conread position: | 384-632 |
| Cow position: | chr1:3386465-3386706 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 128, 92 |
| Conread position: | 384-632 |
| Cow position: | chr1:79336253-79336504 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 116, 108 |
| Conread position: | 384-632 |
| Cow position: | chr1:91893457-91893705 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 136, 220 |
| Conread position: | 384-632 |
| Cow position: | chr1:100597841-100598091 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 146, 74 |
| Conread position: | 384-634 |
| Cow position: | chr1:57567490-57567250 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 129, 85 |
| Conread position: | 384-634 |
| Cow position: | chr1:63606242-63606495 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 128, 217 |
| Conread position: | 384-649 |
| Cow position: | chr1:59672631-59672369 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 187 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 219, 118 |
| Conread position: | 384-649 |
| Cow position: | chr1:88634940-88634676 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 190 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 152, 0 |
| Conread position: | 384-649 |
| Cow position: | chr1:97123395-97123134 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 190, 135 |
| Conread position: | 384-651 |
| Cow position: | chr1:87244349-87244084 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 98, 79 |
| Conread position: | 384-652 |
| Cow position: | chr1:3934603-3934871 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 128, 214 |
| Conread position: | 384-652 |
| Cow position: | chr1:88130302-88130033 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 189 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 128, 215 |
| Conread position: | 384-652 |
| Cow position: | chr1:89361504-89361240 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 201, 0 |
| Conread position: | 384-697 |
| Cow position: | chr1:6708582-6708899 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 189, 209 |
| Conread position: | 384-697 |
| Cow position: | chr1:33550464-33550150 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 44, 109 |
| Conread position: | 384-697 |
| Cow position: | chr1:56162839-56162527 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 211, 118 |
| Conread position: | 384-698 |
| Cow position: | chr1:78289595-78289275 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 116, 108 |
| Conread position: | 384-698 |
| Cow position: | chr1:89740688-89741011 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 73 |
| Conread position: | 384-720 |
| Cow position: | chr1:53364238-53363905 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 78 |
| Conread position: | 384-845 |
| Cow position: | chr1:13449699-13449238 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 106 |
| Conread position: | 384-845 |
| Cow position: | chr1:61308519-61308067 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 298 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 205, 63 |
| Conread position: | 384-846 |
| Cow position: | chr1:53198300-53197838 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 44 |
| Conread position: | 384-847 |
| Cow position: | chr1:40052867-40052414 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 290 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 217, 47 |
| Conread position: | 384-847 |
| Cow position: | chr1:40685177-40685644 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 126 |
| Conread position: | 384-847 |
| Cow position: | chr1:55276971-55277423 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 303 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 205, 96 |
| Conread position: | 384-847 |
| Cow position: | chr1:71563059-71563523 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 286 |
| Conread position: | 384-850 |
| Cow position: | chr1:11292596-11293063 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 215, 207 |
| Conread position: | 384-850 |
| Cow position: | chr1:17013220-17013686 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 207, 373 |
| Conread position: | 384-850 |
| Cow position: | chr1:18880876-18881343 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 298 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 133, 98 |
| Conread position: | 384-850 |
| Cow position: | chr1:20828419-20827958 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 297 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 207, 62 |
| Conread position: | 384-850 |
| Cow position: | chr1:21086917-21086450 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 376 |
| Conread position: | 384-850 |
| Cow position: | chr1:30023682-30024150 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 293 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 133, 128 |
| Conread position: | 384-850 |
| Cow position: | chr1:31395939-31395472 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 376 |
| Conread position: | 384-850 |
| Cow position: | chr1:33895020-33894549 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 43 |
| Conread position: | 384-850 |
| Cow position: | chr1:39543279-39542817 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 63 |
| Conread position: | 384-850 |
| Cow position: | chr1:52172963-52173436 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 383 |
| Conread position: | 384-850 |
| Cow position: | chr1:57656067-57655601 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 102 |
| Conread position: | 384-850 |
| Cow position: | chr1:59210626-59211093 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 376 |
| Conread position: | 384-850 |
| Cow position: | chr1:62925140-62924672 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 301 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 133, 128 |
| Conread position: | 384-850 |
| Cow position: | chr1:68501532-68501064 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 301 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 133, 128 |
| Conread position: | 384-850 |
| Cow position: | chr1:69764539-69764077 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 211, 121 |
| Conread position: | 384-850 |
| Cow position: | chr1:79921219-79921684 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 301 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 133, 69 |
| Conread position: | 384-850 |
| Cow position: | chr1:80359657-80360124 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 272 |
| Conread position: | 384-850 |
| Cow position: | chr1:82564023-82563557 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 298 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 215, 191 |
| Conread position: | 384-850 |
| Cow position: | chr1:82652152-82651688 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 28 |
| Conread position: | 384-850 |
| Cow position: | chr1:87449461-87448994 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 287 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 133, 43 |
| Conread position: | 384-850 |
| Cow position: | chr1:88759074-88758610 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 299 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 189, 209 |
| Conread position: | 384-850 |
| Cow position: | chr1:89425099-89424633 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 292 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 217, 288 |
| Conread position: | 384-850 |
| Cow position: | chr1:91719130-91719597 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 295 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 203, 376 |
| Conread position: | 384-850 |
| Cow position: | chr1:91898517-91898053 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 68 |
| Conread position: | 384-850 |
| Cow position: | chr1:97560227-97559758 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 299 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 133, 128 |
| Conread position: | 384-851 |
| Cow position: | chr1:9382736-9383184 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 0 |
| Conread position: | 384-851 |
| Cow position: | chr1:67835616-67836083 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 68 |
| Conread position: | 384-878 |
| Cow position: | chr1:79637402-79637898 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 43 |
| Conread position: | 385-632 |
| Cow position: | chr1:94659416-94659167 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 127, 8 |
| Conread position: | 385-850 |
| Cow position: | chr1:8553835-8553367 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 285 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 55, 128 |
| Conread position: | 385-850 |
| Cow position: | chr1:33850767-33850301 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 295 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 216, 373 |
| Conread position: | 386-649 |
| Cow position: | chr1:28722361-28722102 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 193 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 151, 0 |
| Conread position: | 386-951 |
| Cow position: | chr1:77122039-77122589 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 201, 75 |
| Conread position: | 387-649 |
| Cow position: | chr1:28801866-28802127 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 188 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 149, 0 |
| Conread position: | 389-562 |
| Cow position: | chr1:5501514-5501336 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 389-581 |
| Cow position: | chr1:79457431-79457628 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 125, 180 |
| Conread position: | 389-600 |
| Cow position: | chr1:82924293-82924503 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 117, 103 |
| Conread position: | 389-631 |
| Cow position: | chr1:72187336-72187580 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 87, 38 |
| Conread position: | 389-631 |
| Cow position: | chr1:86699684-86699930 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 87, 79 |
| Conread position: | 389-632 |
| Cow position: | chr1:58335372-58335130 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 111, 97 |
| Conread position: | 392-631 |
| Cow position: | chr1:55775691-55775446 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 120, 212 |
| Conread position: | 398-631 |
| Cow position: | chr1:49974660-49974900 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 114, 207 |
| Conread position: | 403-688 |
| Cow position: | chr1:100976440-100976722 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 146, 239 |
| Conread position: | 408-652 |
| Cow position: | chr1:85781257-85781503 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 104, 193 |
| Conread position: | 442-634 |
| Cow position: | chr1:74562568-74562376 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 479-954 |
| Cow position: | chr1:38388246-38388704 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 88 |
| Conread position: | 499-850 |
| Cow position: | chr1:99996997-99997350 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 225 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 72, 85 |
| Conread position: | 522-868 |
| Cow position: | chr1:72134295-72133952 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 14 |
| Conread position: | 527-1020 |
| Cow position: | chr1:40907017-40906528 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 154 |
| Conread position: | 534-1018 |
| Cow position: | chr1:89478434-89477926 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 35 |
| Conread position: | 549-808 |
| Cow position: | chr1:52323138-52322882 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 197 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 54, 26 |
| Conread position: | 550-881 |
| Cow position: | chr1:44087371-44087696 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 234 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 50, 105 |
| Conread position: | 554-829 |
| Cow position: | chr1:42057952-42057675 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 200 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 53, 21 |
| Conread position: | 554-849 |
| Cow position: | chr1:87460189-87460473 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 21 |
| Conread position: | 555-848 |
| Cow position: | chr1:67903643-67903923 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 214 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 49, 20 |
| Conread position: | 556-796 |
| Cow position: | chr1:72118425-72118196 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 37, 19 |
| Conread position: | 640-850 |
| Cow position: | chr1:89740926-89741132 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 70, 44 |
| Conread position: | 676-925 |
| Cow position: | chr1:67900739-67900992 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 186 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 48, 76 |
| Conread position: | 732-846 |
| Cow position: | chr1:55324296-55324409 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 95 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 762-975 |
| Cow position: | chr1:72062791-72063007 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 91, 55 |
Show alignments to all cow chromosomes.