Cow genome map
| Conread name: | Ss1.1-Thy1-THY010003G05.5 |
| Conread position: | 364-565 |
| Cow position: | |
| Alignm length: | 205 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 136, 21 |
| Conread position: | 370-562 |
| Cow position: | |
| Alignm length: | 193 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 372-509 |
| Cow position: | |
| Alignm length: | 138 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 374-521 |
| Cow position: | |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 375-850 |
| Cow position: | |
| Alignm length: | 487 |
| Alignm identity: | 322 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 17, 275 |
| Conread position: | 382-472 |
| Cow position: | |
| Alignm length: | 91 |
| Alignm identity: | 81 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 382-520 |
| Cow position: | |
| Alignm length: | 140 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 27, 66 |
| Conread position: | 382-534 |
| Cow position: | |
| Alignm length: | 153 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 382-646 |
| Cow position: | |
| Alignm length: | 267 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 80, 20 |
| Conread position: | 382-649 |
| Cow position: | |
| Alignm length: | 268 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 382-651 |
| Cow position: | |
| Alignm length: | 274 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 107, 158 |
| Conread position: | 382-651 |
| Cow position: | |
| Alignm length: | 270 |
| Alignm identity: | 193 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 155, 0 |
| Conread position: | 382-651 |
| Cow position: | |
| Alignm length: | 270 |
| Alignm identity: | 193 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 159, 0 |
| Conread position: | 382-728 |
| Cow position: | |
| Alignm length: | 352 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 225, 35 |
| Conread position: | 383-534 |
| Cow position: | |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 383-649 |
| Cow position: | |
| Alignm length: | 267 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 383-651 |
| Cow position: | |
| Alignm length: | 269 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 153, 0 |
| Conread position: | 384-523 |
| Cow position: | |
| Alignm length: | 140 |
| Alignm identity: | 105 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 384-534 |
| Cow position: | |
| Alignm length: | 151 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 384-534 |
| Cow position: | |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 384-562 |
| Cow position: | |
| Alignm length: | 181 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 116, 20 |
| Conread position: | 384-586 |
| Cow position: | |
| Alignm length: | 203 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 384-595 |
| Cow position: | |
| Alignm length: | 218 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 116, 70 |
| Conread position: | 384-599 |
| Cow position: | |
| Alignm length: | 222 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 384-631 |
| Cow position: | |
| Alignm length: | 256 |
| Alignm identity: | 176 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 128, 220 |
| Conread position: | 384-631 |
| Cow position: | |
| Alignm length: | 251 |
| Alignm identity: | 174 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 128, 215 |
| Conread position: | 384-631 |
| Cow position: | |
| Alignm length: | 252 |
| Alignm identity: | 174 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 136, 214 |
| Conread position: | 384-632 |
| Cow position: | |
| Alignm length: | 260 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 128, 223 |
| Conread position: | 384-632 |
| Cow position: | |
| Alignm length: | 254 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 116, 108 |
| Conread position: | 384-652 |
| Cow position: | |
| Alignm length: | 274 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 128, 188 |
| Conread position: | 384-689 |
| Cow position: | |
| Alignm length: | 311 |
| Alignm identity: | 204 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 133, 128 |
| Conread position: | 384-735 |
| Cow position: | |
| Alignm length: | 356 |
| Alignm identity: | 240 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 92, 126 |
| Conread position: | 384-786 |
| Cow position: | |
| Alignm length: | 406 |
| Alignm identity: | 256 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 207, 53 |
| Conread position: | 384-786 |
| Cow position: | |
| Alignm length: | 408 |
| Alignm identity: | 264 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 133, 128 |
| Conread position: | 384-846 |
| Cow position: | |
| Alignm length: | 465 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 375 |
| Conread position: | 384-850 |
| Cow position: | |
| Alignm length: | 470 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 376 |
| Conread position: | 384-850 |
| Cow position: | |
| Alignm length: | 470 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 366 |
| Conread position: | 384-850 |
| Cow position: | |
| Alignm length: | 473 |
| Alignm identity: | 300 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 133, 128 |
| Conread position: | 384-850 |
| Cow position: | |
| Alignm length: | 473 |
| Alignm identity: | 292 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 133, 126 |
| Conread position: | 384-850 |
| Cow position: | |
| Alignm length: | 470 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 376 |
| Conread position: | 384-850 |
| Cow position: | |
| Alignm length: | 473 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 67 |
| Conread position: | 384-850 |
| Cow position: | |
| Alignm length: | 468 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 451, 125 |
| Conread position: | 384-850 |
| Cow position: | |
| Alignm length: | 470 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 376 |
| Conread position: | 384-1020 |
| Cow position: | |
| Alignm length: | 667 |
| Alignm identity: | 484 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 219, 192 |
| Conread position: | 387-532 |
| Cow position: | |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 390-850 |
| Cow position: | |
| Alignm length: | 464 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 199, 370 |
| Conread position: | 393-562 |
| Cow position: | |
| Alignm length: | 172 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 107, 51 |
| Conread position: | 396-649 |
| Cow position: | |
| Alignm length: | 256 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 399-826 |
| Cow position: | |
| Alignm length: | 431 |
| Alignm identity: | 290 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 127, 68 |
| Conread position: | 498-847 |
| Cow position: | |
| Alignm length: | 353 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 104, 262 |
| Conread position: | 569-1022 |
| Cow position: | |
| Alignm length: | 472 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 28 |
Show alignments to all cow chromosomes.