Cow genome map

Conread name: Ss1.1-Thy1-THY010003G05.5

Conread position: 370-557
Cow position: chr14:44376584-44376399 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 143
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 53, 15

Conread position: 370-649
Cow position: chr14:44551204-44550930 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 203
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 140, 12

Conread position: 370-1020
Cow position: chr14:40338854-40338216 (view UCSC Genome Browser custom track)
Alignm length: 661
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 13

Conread position: 371-607
Cow position: chr14:5528222-5527982 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 171
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 148, 12

Conread position: 371-697
Cow position: chr14:30585814-30586140 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 217
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 209, 12

Conread position: 372-648
Cow position: chr14:44130109-44129839 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 196
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 10, 0

Conread position: 372-649
Cow position: chr14:47623757-47623464 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 214
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 181, 0

Conread position: 373-638
Cow position: chr14:35387979-35388241 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 201
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 12, 134

Conread position: 373-850
Cow position: chr14:45030244-45030713 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 39

Conread position: 374-561
Cow position: chr14:30656128-30656316 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 131
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 14, 137

Conread position: 374-651
Cow position: chr14:42404053-42403775 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 193
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 11, 163

Conread position: 375-631
Cow position: chr14:50109743-50109487 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 180
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 144, 223

Conread position: 375-632
Cow position: chr14:19329112-19329374 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 182
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 137, 228

Conread position: 375-847
Cow position: chr14:17241362-17240890 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 267

Conread position: 375-850
Cow position: chr14:50134058-50133598 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 113

Conread position: 382-651
Cow position: chr14:7831364-7831627 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 187
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 120, 0

Conread position: 382-651
Cow position: chr14:13660822-13661089 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 190
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 154, 0

Conread position: 382-651
Cow position: chr14:41085633-41085900 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 194
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 175, 0

Conread position: 382-702
Cow position: chr14:45159999-45159671 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 214

Conread position: 382-730
Cow position: chr14:46463943-46463594 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 155

Conread position: 382-735
Cow position: chr14:13272401-13272049 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 235
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 61, 40

Conread position: 382-735
Cow position: chr14:41755020-41754666 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 251
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 56, 45

Conread position: 382-1017
Cow position: chr14:45304487-45305127 (view UCSC Genome Browser custom track)
Alignm length: 653
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 75

Conread position: 382-1017
Cow position: chr14:46083775-46083135 (view UCSC Genome Browser custom track)
Alignm length: 656
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 104

Conread position: 383-649
Cow position: chr14:45712809-45713070 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 180
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 81, 0

Conread position: 384-509
Cow position: chr14:44856266-44856390 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 103
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 85, 0

Conread position: 384-562
Cow position: chr14:48255167-48255349 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 130
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 128, 0

Conread position: 384-605
Cow position: chr14:45767176-45766955 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 160
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 384-631
Cow position: chr14:755004-754756 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 173
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 128, 217

Conread position: 384-631
Cow position: chr14:7471521-7471272 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 170
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 128, 176

Conread position: 384-631
Cow position: chr14:17001902-17002154 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 174
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 44, 220

Conread position: 384-631
Cow position: chr14:22032533-22032784 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 181
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 128, 176

Conread position: 384-632
Cow position: chr14:11155008-11155258 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 179
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 132, 216

Conread position: 384-632
Cow position: chr14:15277685-15277935 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 172
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 91, 38

Conread position: 384-632
Cow position: chr14:17684548-17684299 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 179
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 128, 215

Conread position: 384-632
Cow position: chr14:20781604-20781342 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 180
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 128, 229

Conread position: 384-632
Cow position: chr14:37223047-37222796 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 175
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 92, 84

Conread position: 384-651
Cow position: chr14:45850418-45850165 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 184
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 113, 28

Conread position: 384-652
Cow position: chr14:13302173-13301905 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 187
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 127, 214

Conread position: 384-770
Cow position: chr14:45916527-45916132 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 259
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 78, 267

Conread position: 384-809
Cow position: chr14:10561744-10561317 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 272
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 205, 376

Conread position: 384-811
Cow position: chr14:30597261-30597702 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 263

Conread position: 384-847
Cow position: chr14:33394691-33395156 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 295
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 189, 377

Conread position: 384-850
Cow position: chr14:2283105-2282645 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 300
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 205, 68

Conread position: 384-850
Cow position: chr14:9044594-9044128 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 128

Conread position: 384-850
Cow position: chr14:16418431-16418894 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 302
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 133, 62

Conread position: 384-850
Cow position: chr14:17492339-17492804 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 256

Conread position: 384-850
Cow position: chr14:29049264-29049718 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 306
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 211, 187

Conread position: 386-651
Cow position: chr14:23691074-23691338 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 184
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 150, 0

Conread position: 389-631
Cow position: chr14:16274157-16274403 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 174
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 111, 103

Conread position: 389-827
Cow position: chr14:9678397-9678837 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 283
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 182, 195

Conread position: 393-631
Cow position: chr14:28994722-28994963 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 169
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 85, 207

Conread position: 395-651
Cow position: chr14:44225535-44225283 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 173
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 211, 24

Conread position: 395-829
Cow position: chr14:46434330-46433903 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 0

Conread position: 396-655
Cow position: chr14:44685162-44684904 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 174
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 211, 96

Conread position: 405-646
Cow position: chr14:42151643-42151404 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 161
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 35, 0

Conread position: 429-651
Cow position: chr14:36966885-36966667 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 153
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 82, 0

Conread position: 431-656
Cow position: chr14:38533444-38533672 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 163
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 66, 20

Conread position: 476-852
Cow position: chr14:45205128-45204761 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 250
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 126, 72

Conread position: 619-865
Cow position: chr14:41771864-41771621 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 183
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 7, 139

Conread position: 634-867
Cow position: chr14:35388515-35388749 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 124

Conread position: 694-887
Cow position: chr14:45159656-45159459 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 147
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 160, 65

Show alignments to all cow chromosomes.