Cow genome map
| Conread name: | Ss1.1-Thy1-THY010003G05.5 |
| Conread position: | 297-648 |
| Cow position: | |
| Alignm length: | 356 |
| Alignm identity: | 217 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 296, 15 |
| Conread position: | 314-850 |
| Cow position: | |
| Alignm length: | 544 |
| Alignm identity: | 309 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 203, 70 |
| Conread position: | 368-546 |
| Cow position: | |
| Alignm length: | 186 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 43, 15 |
| Conread position: | 370-520 |
| Cow position: | |
| Alignm length: | 151 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 371-631 |
| Cow position: | |
| Alignm length: | 267 |
| Alignm identity: | 185 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 140, 12 |
| Conread position: | 371-652 |
| Cow position: | |
| Alignm length: | 288 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 15, 230 |
| Conread position: | 372-651 |
| Cow position: | |
| Alignm length: | 280 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 165, 0 |
| Conread position: | 372-651 |
| Cow position: | |
| Alignm length: | 281 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 234, 11 |
| Conread position: | 372-850 |
| Cow position: | |
| Alignm length: | 484 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 276 |
| Conread position: | 373-520 |
| Cow position: | |
| Alignm length: | 149 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 85, 11 |
| Conread position: | 374-543 |
| Cow position: | |
| Alignm length: | 175 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 10, 92 |
| Conread position: | 374-626 |
| Cow position: | |
| Alignm length: | 261 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 13, 55 |
| Conread position: | 374-653 |
| Cow position: | |
| Alignm length: | 290 |
| Alignm identity: | 197 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 11, 232 |
| Conread position: | 374-811 |
| Cow position: | |
| Alignm length: | 443 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 81 |
| Conread position: | 374-847 |
| Cow position: | |
| Alignm length: | 479 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 291 |
| Conread position: | 375-632 |
| Cow position: | |
| Alignm length: | 263 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 137, 226 |
| Conread position: | 375-651 |
| Cow position: | |
| Alignm length: | 279 |
| Alignm identity: | 200 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 208, 187 |
| Conread position: | 375-850 |
| Cow position: | |
| Alignm length: | 479 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 213, 77 |
| Conread position: | 375-850 |
| Cow position: | |
| Alignm length: | 478 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 227, 61 |
| Conread position: | 375-850 |
| Cow position: | |
| Alignm length: | 479 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 214, 385 |
| Conread position: | 375-851 |
| Cow position: | |
| Alignm length: | 478 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 346, 61 |
| Conread position: | 376-651 |
| Cow position: | |
| Alignm length: | 277 |
| Alignm identity: | 185 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 7, 231 |
| Conread position: | 382-524 |
| Cow position: | |
| Alignm length: | 143 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 382-638 |
| Cow position: | |
| Alignm length: | 258 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 129, 24 |
| Conread position: | 382-638 |
| Cow position: | |
| Alignm length: | 257 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 154, 0 |
| Conread position: | 382-651 |
| Cow position: | |
| Alignm length: | 271 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 154, 230 |
| Conread position: | 382-655 |
| Cow position: | |
| Alignm length: | 281 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 118, 112 |
| Conread position: | 382-736 |
| Cow position: | |
| Alignm length: | 360 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 192 |
| Conread position: | 382-873 |
| Cow position: | |
| Alignm length: | 499 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 213, 87 |
| Conread position: | 382-975 |
| Cow position: | |
| Alignm length: | 610 |
| Alignm identity: | 452 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 86 |
| Conread position: | 382-1018 |
| Cow position: | |
| Alignm length: | 654 |
| Alignm identity: | 462 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 225, 29 |
| Conread position: | 383-607 |
| Cow position: | |
| Alignm length: | 226 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 111 |
| Conread position: | 383-649 |
| Cow position: | |
| Alignm length: | 268 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 253, 153 |
| Conread position: | 384-535 |
| Cow position: | |
| Alignm length: | 152 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 384-538 |
| Cow position: | |
| Alignm length: | 155 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 384-556 |
| Cow position: | |
| Alignm length: | 177 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 384-583 |
| Cow position: | |
| Alignm length: | 200 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 384-594 |
| Cow position: | |
| Alignm length: | 213 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 179, 153 |
| Conread position: | 384-595 |
| Cow position: | |
| Alignm length: | 212 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 384-604 |
| Cow position: | |
| Alignm length: | 221 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 384-622 |
| Cow position: | |
| Alignm length: | 242 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 217, 101 |
| Conread position: | 384-625 |
| Cow position: | |
| Alignm length: | 246 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 223, 110 |
| Conread position: | 384-631 |
| Cow position: | |
| Alignm length: | 252 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 127, 216 |
| Conread position: | 384-632 |
| Cow position: | |
| Alignm length: | 257 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 116, 108 |
| Conread position: | 384-632 |
| Cow position: | |
| Alignm length: | 254 |
| Alignm identity: | 176 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 134, 157 |
| Conread position: | 384-632 |
| Cow position: | |
| Alignm length: | 254 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 116, 110 |
| Conread position: | 384-632 |
| Cow position: | |
| Alignm length: | 253 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 94, 216 |
| Conread position: | 384-632 |
| Cow position: | |
| Alignm length: | 257 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 91, 219 |
| Conread position: | 384-634 |
| Cow position: | |
| Alignm length: | 257 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 127, 223 |
| Conread position: | 384-648 |
| Cow position: | |
| Alignm length: | 269 |
| Alignm identity: | 194 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 222, 102 |
| Conread position: | 384-649 |
| Cow position: | |
| Alignm length: | 266 |
| Alignm identity: | 188 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 153, 0 |
| Conread position: | 384-649 |
| Cow position: | |
| Alignm length: | 267 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 220, 158 |
| Conread position: | 384-650 |
| Cow position: | |
| Alignm length: | 268 |
| Alignm identity: | 186 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 137, 118 |
| Conread position: | 384-690 |
| Cow position: | |
| Alignm length: | 313 |
| Alignm identity: | 204 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 133, 128 |
| Conread position: | 384-755 |
| Cow position: | |
| Alignm length: | 378 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 187, 131 |
| Conread position: | 384-829 |
| Cow position: | |
| Alignm length: | 451 |
| Alignm identity: | 305 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 223, 64 |
| Conread position: | 384-847 |
| Cow position: | |
| Alignm length: | 466 |
| Alignm identity: | 289 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 40, 81 |
| Conread position: | 384-847 |
| Cow position: | |
| Alignm length: | 465 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 211, 45 |
| Conread position: | 384-847 |
| Cow position: | |
| Alignm length: | 468 |
| Alignm identity: | 287 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 177, 344 |
| Conread position: | 384-850 |
| Cow position: | |
| Alignm length: | 470 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 47 |
| Conread position: | 384-850 |
| Cow position: | |
| Alignm length: | 474 |
| Alignm identity: | 293 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 133, 41 |
| Conread position: | 384-850 |
| Cow position: | |
| Alignm length: | 470 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 180 |
| Conread position: | 384-850 |
| Cow position: | |
| Alignm length: | 470 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 301 |
| Conread position: | 384-850 |
| Cow position: | |
| Alignm length: | 474 |
| Alignm identity: | 294 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 136, 70 |
| Conread position: | 384-850 |
| Cow position: | |
| Alignm length: | 471 |
| Alignm identity: | 298 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 215, 207 |
| Conread position: | 384-850 |
| Cow position: | |
| Alignm length: | 470 |
| Alignm identity: | 295 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 205, 321 |
| Conread position: | 384-850 |
| Cow position: | |
| Alignm length: | 472 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 128 |
| Conread position: | 384-850 |
| Cow position: | |
| Alignm length: | 474 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 128 |
| Conread position: | 384-850 |
| Cow position: | |
| Alignm length: | 473 |
| Alignm identity: | 299 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 133, 128 |
| Conread position: | 384-850 |
| Cow position: | |
| Alignm length: | 470 |
| Alignm identity: | 292 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 205, 106 |
| Conread position: | 384-864 |
| Cow position: | |
| Alignm length: | 489 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 209, 73 |
| Conread position: | 385-648 |
| Cow position: | |
| Alignm length: | 265 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 132, 152 |
| Conread position: | 385-847 |
| Cow position: | |
| Alignm length: | 463 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 0 |
| Conread position: | 386-522 |
| Cow position: | |
| Alignm length: | 138 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 386-645 |
| Cow position: | |
| Alignm length: | 261 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 86, 49 |
| Conread position: | 386-786 |
| Cow position: | |
| Alignm length: | 404 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 215, 64 |
| Conread position: | 386-850 |
| Cow position: | |
| Alignm length: | 468 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 315 |
| Conread position: | 386-850 |
| Cow position: | |
| Alignm length: | 471 |
| Alignm identity: | 293 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 130, 126 |
| Conread position: | 387-520 |
| Cow position: | |
| Alignm length: | 134 |
| Alignm identity: | 100 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 387-605 |
| Cow position: | |
| Alignm length: | 220 |
| Alignm identity: | 173 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 135, 62 |
| Conread position: | 389-632 |
| Cow position: | |
| Alignm length: | 250 |
| Alignm identity: | 169 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 40, 60 |
| Conread position: | 389-632 |
| Cow position: | |
| Alignm length: | 251 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 131, 215 |
| Conread position: | 389-675 |
| Cow position: | |
| Alignm length: | 290 |
| Alignm identity: | 206 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 211, 139 |
| Conread position: | 389-766 |
| Cow position: | |
| Alignm length: | 383 |
| Alignm identity: | 255 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 90, 55 |
| Conread position: | 390-787 |
| Cow position: | |
| Alignm length: | 402 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 198, 228 |
| Conread position: | 391-757 |
| Cow position: | |
| Alignm length: | 370 |
| Alignm identity: | 235 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 210, 50 |
| Conread position: | 391-850 |
| Cow position: | |
| Alignm length: | 465 |
| Alignm identity: | 287 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 126, 121 |
| Conread position: | 392-644 |
| Cow position: | |
| Alignm length: | 253 |
| Alignm identity: | 184 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 194, 0 |
| Conread position: | 393-632 |
| Cow position: | |
| Alignm length: | 245 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 107, 99 |
| Conread position: | 396-523 |
| Cow position: | |
| Alignm length: | 128 |
| Alignm identity: | 100 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 396-850 |
| Cow position: | |
| Alignm length: | 460 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 364 |
| Conread position: | 399-603 |
| Cow position: | |
| Alignm length: | 205 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 404-846 |
| Cow position: | |
| Alignm length: | 446 |
| Alignm identity: | 275 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 185, 80 |
| Conread position: | 405-608 |
| Cow position: | |
| Alignm length: | 207 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 190, 22 |
| Conread position: | 406-666 |
| Cow position: | |
| Alignm length: | 264 |
| Alignm identity: | 194 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 199, 64 |
| Conread position: | 419-649 |
| Cow position: | |
| Alignm length: | 231 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 497-638 |
| Cow position: | |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 531-1022 |
| Cow position: | |
| Alignm length: | 526 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 23 |
| Conread position: | 570-852 |
| Cow position: | |
| Alignm length: | 287 |
| Alignm identity: | 201 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 36, 14 |
| Conread position: | 602-851 |
| Cow position: | |
| Alignm length: | 251 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 196, 155 |
| Conread position: | 643-852 |
| Cow position: | |
| Alignm length: | 210 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 646-975 |
| Cow position: | |
| Alignm length: | 342 |
| Alignm identity: | 241 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 208, 37 |
Show alignments to all cow chromosomes.