Cow genome map
| Conread name: | Ss1.1-Thy1-THY010003G05.5 |
| Conread position: | 355-625 |
| Cow position: | |
| Alignm length: | 278 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 29 |
| Conread position: | 356-770 |
| Cow position: | |
| Alignm length: | 429 |
| Alignm identity: | 293 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 180, 25 |
| Conread position: | 370-518 |
| Cow position: | |
| Alignm length: | 151 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 92, 13 |
| Conread position: | 370-538 |
| Cow position: | |
| Alignm length: | 170 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 14, 111 |
| Conread position: | 370-562 |
| Cow position: | |
| Alignm length: | 198 |
| Alignm identity: | 148 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 130, 15 |
| Conread position: | 371-850 |
| Cow position: | |
| Alignm length: | 480 |
| Alignm identity: | 309 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 372-537 |
| Cow position: | |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 372-649 |
| Cow position: | |
| Alignm length: | 280 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 138, 9 |
| Conread position: | 374-539 |
| Cow position: | |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 374-599 |
| Cow position: | |
| Alignm length: | 231 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 374-630 |
| Cow position: | |
| Alignm length: | 259 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 8, 32 |
| Conread position: | 374-632 |
| Cow position: | |
| Alignm length: | 265 |
| Alignm identity: | 181 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 11, 228 |
| Conread position: | 375-624 |
| Cow position: | |
| Alignm length: | 261 |
| Alignm identity: | 180 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 125, 117 |
| Conread position: | 375-632 |
| Cow position: | |
| Alignm length: | 261 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 137, 226 |
| Conread position: | 375-652 |
| Cow position: | |
| Alignm length: | 284 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 103, 219 |
| Conread position: | 375-809 |
| Cow position: | |
| Alignm length: | 439 |
| Alignm identity: | 283 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 142, 137 |
| Conread position: | 382-509 |
| Cow position: | |
| Alignm length: | 130 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 382-638 |
| Cow position: | |
| Alignm length: | 261 |
| Alignm identity: | 194 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 213, 72 |
| Conread position: | 382-647 |
| Cow position: | |
| Alignm length: | 267 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 224, 154 |
| Conread position: | 382-648 |
| Cow position: | |
| Alignm length: | 268 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 80, 129 |
| Conread position: | 382-649 |
| Cow position: | |
| Alignm length: | 268 |
| Alignm identity: | 189 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 170, 0 |
| Conread position: | 382-649 |
| Cow position: | |
| Alignm length: | 268 |
| Alignm identity: | 192 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 175, 0 |
| Conread position: | 382-649 |
| Cow position: | |
| Alignm length: | 269 |
| Alignm identity: | 191 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 162, 21 |
| Conread position: | 382-649 |
| Cow position: | |
| Alignm length: | 271 |
| Alignm identity: | 194 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 129, 180 |
| Conread position: | 382-651 |
| Cow position: | |
| Alignm length: | 271 |
| Alignm identity: | 190 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 91, 121 |
| Conread position: | 382-651 |
| Cow position: | |
| Alignm length: | 278 |
| Alignm identity: | 205 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 136, 49 |
| Conread position: | 382-651 |
| Cow position: | |
| Alignm length: | 270 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 382-656 |
| Cow position: | |
| Alignm length: | 276 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 224, 127 |
| Conread position: | 382-725 |
| Cow position: | |
| Alignm length: | 350 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 179 |
| Conread position: | 382-734 |
| Cow position: | |
| Alignm length: | 359 |
| Alignm identity: | 245 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 185, 135 |
| Conread position: | 382-790 |
| Cow position: | |
| Alignm length: | 413 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 213, 379 |
| Conread position: | 382-805 |
| Cow position: | |
| Alignm length: | 433 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 156 |
| Conread position: | 382-850 |
| Cow position: | |
| Alignm length: | 469 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 382-852 |
| Cow position: | |
| Alignm length: | 495 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 331 |
| Conread position: | 382-875 |
| Cow position: | |
| Alignm length: | 503 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 88 |
| Conread position: | 383-632 |
| Cow position: | |
| Alignm length: | 253 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 133, 75 |
| Conread position: | 384-520 |
| Cow position: | |
| Alignm length: | 138 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 116, 108 |
| Conread position: | 384-523 |
| Cow position: | |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 384-541 |
| Cow position: | |
| Alignm length: | 158 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 384-543 |
| Cow position: | |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 384-543 |
| Cow position: | |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 384-543 |
| Cow position: | |
| Alignm length: | 161 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 384-545 |
| Cow position: | |
| Alignm length: | 164 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 384-562 |
| Cow position: | |
| Alignm length: | 183 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 128, 60 |
| Conread position: | 384-599 |
| Cow position: | |
| Alignm length: | 223 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 384-599 |
| Cow position: | |
| Alignm length: | 221 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 384-599 |
| Cow position: | |
| Alignm length: | 225 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 130, 95 |
| Conread position: | 384-603 |
| Cow position: | |
| Alignm length: | 226 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 384-630 |
| Cow position: | |
| Alignm length: | 258 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 128, 225 |
| Conread position: | 384-631 |
| Cow position: | |
| Alignm length: | 253 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 128, 15 |
| Conread position: | 384-632 |
| Cow position: | |
| Alignm length: | 254 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 128, 217 |
| Conread position: | 384-633 |
| Cow position: | |
| Alignm length: | 253 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 130, 215 |
| Conread position: | 384-634 |
| Cow position: | |
| Alignm length: | 256 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 179, 0 |
| Conread position: | 384-634 |
| Cow position: | |
| Alignm length: | 253 |
| Alignm identity: | 171 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 105, 213 |
| Conread position: | 384-645 |
| Cow position: | |
| Alignm length: | 263 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 215, 125 |
| Conread position: | 384-647 |
| Cow position: | |
| Alignm length: | 266 |
| Alignm identity: | 182 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 44, 122 |
| Conread position: | 384-649 |
| Cow position: | |
| Alignm length: | 268 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 45, 52 |
| Conread position: | 384-652 |
| Cow position: | |
| Alignm length: | 274 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 136, 83 |
| Conread position: | 384-689 |
| Cow position: | |
| Alignm length: | 312 |
| Alignm identity: | 208 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 133, 128 |
| Conread position: | 384-690 |
| Cow position: | |
| Alignm length: | 313 |
| Alignm identity: | 205 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 133, 128 |
| Conread position: | 384-690 |
| Cow position: | |
| Alignm length: | 313 |
| Alignm identity: | 205 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 133, 128 |
| Conread position: | 384-691 |
| Cow position: | |
| Alignm length: | 315 |
| Alignm identity: | 207 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 169, 0 |
| Conread position: | 384-697 |
| Cow position: | |
| Alignm length: | 319 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 133, 128 |
| Conread position: | 384-697 |
| Cow position: | |
| Alignm length: | 318 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 384-698 |
| Cow position: | |
| Alignm length: | 321 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 202, 119 |
| Conread position: | 384-785 |
| Cow position: | |
| Alignm length: | 405 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 212, 346 |
| Conread position: | 384-786 |
| Cow position: | |
| Alignm length: | 407 |
| Alignm identity: | 259 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 177, 377 |
| Conread position: | 384-786 |
| Cow position: | |
| Alignm length: | 408 |
| Alignm identity: | 268 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 205, 73 |
| Conread position: | 384-816 |
| Cow position: | |
| Alignm length: | 445 |
| Alignm identity: | 278 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 58, 242 |
| Conread position: | 384-845 |
| Cow position: | |
| Alignm length: | 465 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 211, 376 |
| Conread position: | 384-847 |
| Cow position: | |
| Alignm length: | 467 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 376 |
| Conread position: | 384-847 |
| Cow position: | |
| Alignm length: | 467 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 75 |
| Conread position: | 384-850 |
| Cow position: | |
| Alignm length: | 474 |
| Alignm identity: | 300 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 133, 128 |
| Conread position: | 384-850 |
| Cow position: | |
| Alignm length: | 470 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 376 |
| Conread position: | 384-850 |
| Cow position: | |
| Alignm length: | 470 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 376 |
| Conread position: | 384-850 |
| Cow position: | |
| Alignm length: | 471 |
| Alignm identity: | 297 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 189, 173 |
| Conread position: | 384-850 |
| Cow position: | |
| Alignm length: | 474 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 380 |
| Conread position: | 384-850 |
| Cow position: | |
| Alignm length: | 470 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 102 |
| Conread position: | 384-850 |
| Cow position: | |
| Alignm length: | 474 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 149 |
| Conread position: | 384-850 |
| Cow position: | |
| Alignm length: | 468 |
| Alignm identity: | 288 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 189, 54 |
| Conread position: | 384-871 |
| Cow position: | |
| Alignm length: | 498 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 262 |
| Conread position: | 386-645 |
| Cow position: | |
| Alignm length: | 260 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 386-753 |
| Cow position: | |
| Alignm length: | 369 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 214, 193 |
| Conread position: | 386-809 |
| Cow position: | |
| Alignm length: | 429 |
| Alignm identity: | 277 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 131, 13 |
| Conread position: | 386-845 |
| Cow position: | |
| Alignm length: | 466 |
| Alignm identity: | 295 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 131, 126 |
| Conread position: | 386-846 |
| Cow position: | |
| Alignm length: | 464 |
| Alignm identity: | 301 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 205, 100 |
| Conread position: | 386-850 |
| Cow position: | |
| Alignm length: | 469 |
| Alignm identity: | 295 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 220, 206 |
| Conread position: | 386-1018 |
| Cow position: | |
| Alignm length: | 655 |
| Alignm identity: | 462 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 71 |
| Conread position: | 387-521 |
| Cow position: | |
| Alignm length: | 136 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 22, 16 |
| Conread position: | 388-660 |
| Cow position: | |
| Alignm length: | 284 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 5, 25 |
| Conread position: | 389-709 |
| Cow position: | |
| Alignm length: | 327 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 119, 34 |
| Conread position: | 389-850 |
| Cow position: | |
| Alignm length: | 465 |
| Alignm identity: | 292 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 200, 63 |
| Conread position: | 390-698 |
| Cow position: | |
| Alignm length: | 309 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 393-599 |
| Cow position: | |
| Alignm length: | 213 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 413-734 |
| Cow position: | |
| Alignm length: | 327 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 99 |
| Conread position: | 417-598 |
| Cow position: | |
| Alignm length: | 182 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 420-649 |
| Cow position: | |
| Alignm length: | 230 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 432-651 |
| Cow position: | |
| Alignm length: | 220 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 445-643 |
| Cow position: | |
| Alignm length: | 204 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 105, 99 |
| Conread position: | 499-712 |
| Cow position: | |
| Alignm length: | 220 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 519-1018 |
| Cow position: | |
| Alignm length: | 516 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 225, 15 |
| Conread position: | 530-790 |
| Cow position: | |
| Alignm length: | 266 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 36, 21 |
| Conread position: | 555-1029 |
| Cow position: | |
| Alignm length: | 500 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 20 |
| Conread position: | 558-893 |
| Cow position: | |
| Alignm length: | 343 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 23 |
| Conread position: | 642-852 |
| Cow position: | |
| Alignm length: | 213 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 27, 60 |
| Conread position: | 735-848 |
| Cow position: | |
| Alignm length: | 114 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 745-885 |
| Cow position: | |
| Alignm length: | 147 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 69, 14 |
Show alignments to all cow chromosomes.