Cow genome map
| Conread name: | Ss1.1-Thy1-THY010003G05.5 |
| Conread position: | 375-757 |
| Cow position: | chr20:18316033-18316410 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 62 |
| Conread position: | 378-649 |
| Cow position: | chr20:19006050-19006322 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 192 |
| Conread position: | 382-532 |
| Cow position: | chr20:28593284-28593134 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 382-651 |
| Cow position: | chr20:5483763-5483503 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 95, 34 |
| Conread position: | 382-698 |
| Cow position: | chr20:10846758-10847062 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 220, 40 |
| Conread position: | 382-846 |
| Cow position: | chr20:13681533-13681994 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 5 |
| Conread position: | 382-892 |
| Cow position: | chr20:11276736-11277254 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 295 |
| Conread position: | 384-518 |
| Cow position: | chr20:7116925-7117059 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 384-548 |
| Cow position: | chr20:822269-822103 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 150, 164 |
| Conread position: | 384-555 |
| Cow position: | chr20:5534493-5534319 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 384-599 |
| Cow position: | chr20:23470115-23470337 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 94, 193 |
| Conread position: | 384-623 |
| Cow position: | chr20:27868743-27868504 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 126, 215 |
| Conread position: | 384-629 |
| Cow position: | chr20:15098512-15098759 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 128, 176 |
| Conread position: | 384-631 |
| Cow position: | chr20:12439200-12439444 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 135, 180 |
| Conread position: | 384-631 |
| Cow position: | chr20:21913884-21913633 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 128, 227 |
| Conread position: | 384-632 |
| Cow position: | chr20:8004967-8005226 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 179 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 128, 226 |
| Conread position: | 384-632 |
| Cow position: | chr20:15291593-15291355 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 384-632 |
| Cow position: | chr20:25851440-25851691 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 94, 217 |
| Conread position: | 384-634 |
| Cow position: | chr20:13762455-13762206 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 127, 28 |
| Conread position: | 384-635 |
| Cow position: | chr20:19192691-19192436 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 133, 128 |
| Conread position: | 384-647 |
| Cow position: | chr20:3032532-3032277 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 110, 174 |
| Conread position: | 384-649 |
| Cow position: | chr20:4800069-4800331 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 0 |
| Conread position: | 384-651 |
| Cow position: | chr20:3252585-3252848 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 185 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 152, 0 |
| Conread position: | 384-651 |
| Cow position: | chr20:8313872-8314134 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 153, 0 |
| Conread position: | 384-765 |
| Cow position: | chr20:15064295-15063913 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 199 |
| Conread position: | 384-847 |
| Cow position: | chr20:1058181-1058645 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 376 |
| Conread position: | 384-850 |
| Cow position: | chr20:19437477-19437016 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 28 |
| Conread position: | 384-850 |
| Cow position: | chr20:31123918-31123450 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 295 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 133, 128 |
| Conread position: | 386-649 |
| Cow position: | chr20:24614126-24613874 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 159, 0 |
| Conread position: | 386-1021 |
| Cow position: | chr20:10103009-10103619 (view UCSC Genome Browser custom track) |
| Alignm length: | 650 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 477, 16 |
| Conread position: | 393-632 |
| Cow position: | chr20:23798413-23798173 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 119, 206 |
| Conread position: | 396-730 |
| Cow position: | chr20:21393100-21392771 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 103, 46 |
| Conread position: | 672-1022 |
| Cow position: | chr20:9521597-9521969 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 265 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 98, 84 |
| Conread position: | 727-1017 |
| Cow position: | chr20:31847483-31847782 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 202 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 124, 32 |
| Conread position: | 781-1022 |
| Cow position: | chr20:18316411-18316665 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 185 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 73, 102 |
Show alignments to all cow chromosomes.