Cow genome map
| Conread name: | Ss1.1-Thy1-THY010003G05.5 |
| Conread position: | 370-551 |
| Cow position: | |
| Alignm length: | 183 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 147, 142 |
| Conread position: | 372-537 |
| Cow position: | |
| Alignm length: | 166 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 372-649 |
| Cow position: | |
| Alignm length: | 281 |
| Alignm identity: | 183 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 48, 10 |
| Conread position: | 372-876 |
| Cow position: | |
| Alignm length: | 513 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 234, 10 |
| Conread position: | 373-522 |
| Cow position: | |
| Alignm length: | 150 |
| Alignm identity: | 112 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 373-651 |
| Cow position: | |
| Alignm length: | 283 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 233, 0 |
| Conread position: | 374-625 |
| Cow position: | |
| Alignm length: | 257 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 11, 24 |
| Conread position: | 375-786 |
| Cow position: | |
| Alignm length: | 423 |
| Alignm identity: | 277 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 53, 338 |
| Conread position: | 382-520 |
| Cow position: | |
| Alignm length: | 140 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 382-585 |
| Cow position: | |
| Alignm length: | 204 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 382-592 |
| Cow position: | |
| Alignm length: | 211 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 382-605 |
| Cow position: | |
| Alignm length: | 224 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 382-635 |
| Cow position: | |
| Alignm length: | 259 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 98 |
| Conread position: | 382-651 |
| Cow position: | |
| Alignm length: | 272 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 46, 156 |
| Conread position: | 382-715 |
| Cow position: | |
| Alignm length: | 341 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 213 |
| Conread position: | 382-747 |
| Cow position: | |
| Alignm length: | 372 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 106 |
| Conread position: | 383-588 |
| Cow position: | |
| Alignm length: | 215 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 117, 109 |
| Conread position: | 384-562 |
| Cow position: | |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 384-632 |
| Cow position: | |
| Alignm length: | 258 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 94, 210 |
| Conread position: | 384-632 |
| Cow position: | |
| Alignm length: | 252 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 128, 215 |
| Conread position: | 384-632 |
| Cow position: | |
| Alignm length: | 253 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 128, 216 |
| Conread position: | 384-636 |
| Cow position: | |
| Alignm length: | 259 |
| Alignm identity: | 190 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 44, 12 |
| Conread position: | 384-649 |
| Cow position: | |
| Alignm length: | 266 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 152, 0 |
| Conread position: | 384-690 |
| Cow position: | |
| Alignm length: | 313 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 133, 128 |
| Conread position: | 384-786 |
| Cow position: | |
| Alignm length: | 409 |
| Alignm identity: | 267 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 88, 80 |
| Conread position: | 384-809 |
| Cow position: | |
| Alignm length: | 429 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 207, 376 |
| Conread position: | 384-809 |
| Cow position: | |
| Alignm length: | 430 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 207, 258 |
| Conread position: | 384-847 |
| Cow position: | |
| Alignm length: | 471 |
| Alignm identity: | 297 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 133, 128 |
| Conread position: | 384-850 |
| Cow position: | |
| Alignm length: | 470 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 376 |
| Conread position: | 384-850 |
| Cow position: | |
| Alignm length: | 470 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 60 |
| Conread position: | 384-850 |
| Cow position: | |
| Alignm length: | 475 |
| Alignm identity: | 299 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 207, 259 |
| Conread position: | 384-850 |
| Cow position: | |
| Alignm length: | 471 |
| Alignm identity: | 296 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 133, 128 |
| Conread position: | 384-850 |
| Cow position: | |
| Alignm length: | 472 |
| Alignm identity: | 300 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 136, 64 |
| Conread position: | 384-850 |
| Cow position: | |
| Alignm length: | 472 |
| Alignm identity: | 304 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 116, 110 |
| Conread position: | 385-809 |
| Cow position: | |
| Alignm length: | 434 |
| Alignm identity: | 282 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 43, 80 |
| Conread position: | 389-520 |
| Cow position: | |
| Alignm length: | 132 |
| Alignm identity: | 98 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 389-523 |
| Cow position: | |
| Alignm length: | 136 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 119, 69 |
| Conread position: | 389-604 |
| Cow position: | |
| Alignm length: | 224 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 396-632 |
| Cow position: | |
| Alignm length: | 247 |
| Alignm identity: | 167 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 116, 210 |
| Conread position: | 399-655 |
| Cow position: | |
| Alignm length: | 263 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 113, 22 |
| Conread position: | 401-786 |
| Cow position: | |
| Alignm length: | 390 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 68 |
| Conread position: | 458-809 |
| Cow position: | |
| Alignm length: | 357 |
| Alignm identity: | 220 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 59, 54 |
| Conread position: | 549-1017 |
| Cow position: | |
| Alignm length: | 490 |
| Alignm identity: | 330 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 20, 51 |
| Conread position: | 553-852 |
| Cow position: | |
| Alignm length: | 304 |
| Alignm identity: | 218 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 55, 22 |
| Conread position: | 641-848 |
| Cow position: | |
| Alignm length: | 210 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 84, 51 |
| Conread position: | 684-1018 |
| Cow position: | |
| Alignm length: | 356 |
| Alignm identity: | 241 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 170, 19 |
| Conread position: | 789-1027 |
| Cow position: | |
| Alignm length: | 254 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 65, 17 |
Show alignments to all cow chromosomes.