Cow genome map
| Conread name: | Ss1.1-Thy1-THY010003G05.5 |
| Conread position: | 368-828 |
| Cow position: | chr25:26921750-26921286 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 212 |
| Conread position: | 371-850 |
| Cow position: | chr25:20777396-20777875 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 165 |
| Conread position: | 374-523 |
| Cow position: | chr25:18092559-18092409 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 9, 114 |
| Conread position: | 382-584 |
| Cow position: | chr25:17469148-17469353 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 63, 160 |
| Conread position: | 382-649 |
| Cow position: | chr25:18028067-18028329 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 382-651 |
| Cow position: | chr25:18061036-18061303 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 154, 0 |
| Conread position: | 382-656 |
| Cow position: | chr25:11375801-11376071 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 268, 67 |
| Conread position: | 383-847 |
| Cow position: | chr25:18172858-18172387 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 202 |
| Conread position: | 384-521 |
| Cow position: | chr25:23346158-23346297 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 384-540 |
| Cow position: | chr25:26278811-26278649 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 384-562 |
| Cow position: | chr25:34014810-34014995 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 116, 108 |
| Conread position: | 384-583 |
| Cow position: | chr25:22147030-22146832 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 116, 62 |
| Conread position: | 384-608 |
| Cow position: | chr25:15443896-15443669 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 133, 128 |
| Conread position: | 384-631 |
| Cow position: | chr25:13780572-13780325 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 176 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 116, 110 |
| Conread position: | 384-632 |
| Cow position: | chr25:8674464-8674217 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 134, 213 |
| Conread position: | 384-632 |
| Cow position: | chr25:18890479-18890717 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 123, 78 |
| Conread position: | 384-651 |
| Cow position: | chr25:18302308-18302040 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 197 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 40, 74 |
| Conread position: | 384-703 |
| Cow position: | chr25:18411718-18412020 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 235 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 222, 62 |
| Conread position: | 384-786 |
| Cow position: | chr25:32579486-32579082 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 261 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 176, 181 |
| Conread position: | 384-786 |
| Cow position: | chr25:35362918-35363323 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 266 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 133, 128 |
| Conread position: | 384-846 |
| Cow position: | chr25:32979534-32979990 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 298 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 133, 128 |
| Conread position: | 384-847 |
| Cow position: | chr25:17590042-17590487 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 300 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 218, 28 |
| Conread position: | 384-850 |
| Cow position: | chr25:19916590-19916127 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 207, 52 |
| Conread position: | 386-850 |
| Cow position: | chr25:33991531-33991997 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 291 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 131, 124 |
| Conread position: | 386-888 |
| Cow position: | chr25:18276310-18276818 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 221, 340 |
| Conread position: | 389-632 |
| Cow position: | chr25:34347460-34347703 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 111, 89 |
| Conread position: | 392-599 |
| Cow position: | chr25:12944217-12944428 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 396-649 |
| Cow position: | chr25:14015757-14015514 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 143, 41 |
| Conread position: | 500-847 |
| Cow position: | chr25:18351687-18352036 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 7, 131 |
| Conread position: | 555-869 |
| Cow position: | chr25:18092260-18091947 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 20 |
Show alignments to all cow chromosomes.