Cow genome map
| Conread name: | Ss1.1-Thy1-THY010003G05.5 |
| Conread position: | 374-631 |
| Cow position: | chr26:5674461-5674197 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 11, 231 |
| Conread position: | 382-520 |
| Cow position: | chr26:3691381-3691243 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 382-1032 |
| Cow position: | chr26:9846583-9847241 (view UCSC Genome Browser custom track) |
| Alignm length: | 672 |
| Alignm identity: | 482 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 388 |
| Conread position: | 383-847 |
| Cow position: | chr26:2352824-2353287 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 16 |
| Conread position: | 384-543 |
| Cow position: | chr26:28424383-28424544 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 384-593 |
| Cow position: | chr26:35150296-35150507 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 41, 156 |
| Conread position: | 384-631 |
| Cow position: | chr26:19351958-19352207 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 128, 216 |
| Conread position: | 384-632 |
| Cow position: | chr26:6850720-6850970 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 128, 216 |
| Conread position: | 384-649 |
| Cow position: | chr26:23605330-23605591 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 384-689 |
| Cow position: | chr26:19998009-19997702 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 133, 128 |
| Conread position: | 384-786 |
| Cow position: | chr26:11254539-11254943 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 269 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 177, 15 |
| Conread position: | 384-845 |
| Cow position: | chr26:12589038-12589498 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 128 |
| Conread position: | 384-847 |
| Cow position: | chr26:34012570-34012107 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 60 |
| Conread position: | 384-850 |
| Cow position: | chr26:3031286-3031749 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 300 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 133, 69 |
| Conread position: | 384-850 |
| Cow position: | chr26:8918509-8918045 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 292 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 205, 244 |
| Conread position: | 384-850 |
| Cow position: | chr26:9111988-9111520 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 295 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 133, 128 |
| Conread position: | 384-850 |
| Cow position: | chr26:24201144-24200689 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 297 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 215, 100 |
| Conread position: | 384-850 |
| Cow position: | chr26:30782291-30781824 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 295 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 195, 376 |
| Conread position: | 387-523 |
| Cow position: | chr26:9851093-9851229 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 387-523 |
| Cow position: | chr26:9854557-9854693 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 389-632 |
| Cow position: | chr26:9563807-9564054 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 89, 217 |
| Conread position: | 392-635 |
| Cow position: | chr26:17397389-17397639 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 97, 212 |
| Conread position: | 428-649 |
| Cow position: | chr26:4607275-4607485 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 458-816 |
| Cow position: | chr26:8860133-8860494 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 129, 303 |
| Conread position: | 489-757 |
| Cow position: | chr26:9090200-9089929 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 137 |
| Conread position: | 534-1018 |
| Cow position: | chr26:20032407-20031907 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 84 |
| Conread position: | 534-1019 |
| Cow position: | chr26:20299855-20300346 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 20 |
| Conread position: | 653-1018 |
| Cow position: | chr26:21350265-21349880 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 255 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 201, 91 |
Show alignments to all cow chromosomes.