Cow genome map

Conread name: Ss1.1-Thy1-THY010003G05.5

Conread position: 370-598
Cow position: chr28:5796366-5796140 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 175
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 58, 92

Conread position: 370-799
Cow position: chr28:7790689-7791117 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 79

Conread position: 371-744
Cow position: chr28:6780813-6781182 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 240
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 15, 43

Conread position: 371-850
Cow position: chr28:15920955-15921414 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 305
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 12, 0

Conread position: 372-540
Cow position: chr28:26007582-26007419 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 10, 0

Conread position: 372-733
Cow position: chr28:21325331-21324971 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 10

Conread position: 372-842
Cow position: chr28:7816789-7816315 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 8

Conread position: 373-649
Cow position: chr28:4381836-4382115 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 193
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 55, 11

Conread position: 375-562
Cow position: chr28:1168619-1168809 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 139
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 125, 117

Conread position: 377-535
Cow position: chr28:1387850-1388005 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 76, 25

Conread position: 382-645
Cow position: chr28:2591482-2591218 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 179
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 154, 235

Conread position: 382-647
Cow position: chr28:17331117-17331375 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 179
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 19, 0

Conread position: 382-649
Cow position: chr28:9137458-9137735 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 187
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 80, 9

Conread position: 382-831
Cow position: chr28:2990428-2990877 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 159

Conread position: 382-843
Cow position: chr28:8721924-8722368 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 69

Conread position: 382-845
Cow position: chr28:10619570-10620031 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 142

Conread position: 382-1017
Cow position: chr28:5812245-5811595 (view UCSC Genome Browser custom track)
Alignm length: 658
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 124

Conread position: 382-1021
Cow position: chr28:24667146-24666509 (view UCSC Genome Browser custom track)
Alignm length: 661
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 14

Conread position: 384-534
Cow position: chr28:9953700-9953550 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 384-562
Cow position: chr28:781933-781749 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 131
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 116, 110

Conread position: 384-562
Cow position: chr28:5752624-5752804 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 132
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 128, 173

Conread position: 384-562
Cow position: chr28:33251855-33251674 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 127, 0

Conread position: 384-622
Cow position: chr28:1504177-1503933 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 170
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 127, 195

Conread position: 384-631
Cow position: chr28:8378102-8377847 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 177
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 46, 222

Conread position: 384-631
Cow position: chr28:15378478-15378731 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 173
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 128, 122

Conread position: 384-632
Cow position: chr28:5245092-5244839 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 175
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 129, 219

Conread position: 384-632
Cow position: chr28:14706131-14706390 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 184
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 91, 224

Conread position: 384-632
Cow position: chr28:22261615-22261853 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 174
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 384-632
Cow position: chr28:26426725-26426970 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 173
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 136, 68

Conread position: 384-632
Cow position: chr28:32792843-32793086 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 172
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 128, 45

Conread position: 384-634
Cow position: chr28:13522269-13522021 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 170
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 98, 60

Conread position: 384-639
Cow position: chr28:5565397-5565141 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 182
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 116, 110

Conread position: 384-786
Cow position: chr28:13441374-13441779 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 268
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 133, 128

Conread position: 384-850
Cow position: chr28:488993-488525 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 300
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 177, 200

Conread position: 384-850
Cow position: chr28:1952646-1952183 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 303
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 44, 181

Conread position: 384-850
Cow position: chr28:6663794-6663326 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 303
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 133, 128

Conread position: 384-850
Cow position: chr28:15950484-15950016 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 299
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 133, 128

Conread position: 386-847
Cow position: chr28:7820989-7820529 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 176

Conread position: 388-655
Cow position: chr28:7727238-7727513 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 178
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 94, 234

Conread position: 389-559
Cow position: chr28:3193244-3193413 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 111, 103

Conread position: 389-562
Cow position: chr28:10582450-10582628 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 123, 0

Conread position: 389-562
Cow position: chr28:13459505-13459327 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 111, 105

Conread position: 389-562
Cow position: chr28:15035885-15036067 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 133
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 111, 103

Conread position: 389-632
Cow position: chr28:12149860-12149613 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 175
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 123, 212

Conread position: 391-1004
Cow position: chr28:21358544-21357913 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 157

Conread position: 392-562
Cow position: chr28:28973697-28973861 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 97, 103

Conread position: 393-604
Cow position: chr28:9156886-9157097 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 151
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 393-632
Cow position: chr28:5115545-5115787 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 169
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 118, 208

Conread position: 393-632
Cow position: chr28:17667985-17668226 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 172
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 119, 180

Conread position: 394-632
Cow position: chr28:29819100-29818858 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 165
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 100, 208

Conread position: 396-538
Cow position: chr28:34648473-34648332 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 107
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 396-634
Cow position: chr28:2083128-2082876 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 172
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 118, 216

Conread position: 475-952
Cow position: chr28:17314424-17313926 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 346
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 62, 263

Conread position: 566-1018
Cow position: chr28:25784869-25784409 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 304
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 40, 9

Conread position: 569-850
Cow position: chr28:26006814-26006531 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 6

Conread position: 581-888
Cow position: chr28:1388026-1388334 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 225
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 21, 167

Conread position: 709-1017
Cow position: chr28:25706019-25706336 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 215
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 142, 52

Show alignments to all cow chromosomes.