Cow genome map
Conread name: | Ss1.1-Thy1-THY010003G05.5 |
Conread position: | 370-598 |
Cow position: | chr28:5796366-5796140 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 175 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 58, 92 |
Conread position: | 370-799 |
Cow position: | chr28:7790689-7791117 (view UCSC Genome Browser custom track) |
Alignm length: | 435 |
Alignm identity: | 326 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 236, 79 |
Conread position: | 371-744 |
Cow position: | chr28:6780813-6781182 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 240 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 15, 43 |
Conread position: | 371-850 |
Cow position: | chr28:15920955-15921414 (view UCSC Genome Browser custom track) |
Alignm length: | 480 |
Alignm identity: | 305 |
Alignm E-value: | 8e-38 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 372-540 |
Cow position: | chr28:26007582-26007419 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 128 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 372-733 |
Cow position: | chr28:21325331-21324971 (view UCSC Genome Browser custom track) |
Alignm length: | 368 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 223, 10 |
Conread position: | 372-842 |
Cow position: | chr28:7816789-7816315 (view UCSC Genome Browser custom track) |
Alignm length: | 489 |
Alignm identity: | 347 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 8 |
Conread position: | 373-649 |
Cow position: | chr28:4381836-4382115 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 193 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 55, 11 |
Conread position: | 375-562 |
Cow position: | chr28:1168619-1168809 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 139 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 125, 117 |
Conread position: | 377-535 |
Cow position: | chr28:1387850-1388005 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 122 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 76, 25 |
Conread position: | 382-645 |
Cow position: | chr28:2591482-2591218 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 179 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 154, 235 |
Conread position: | 382-647 |
Cow position: | chr28:17331117-17331375 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 179 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 382-649 |
Cow position: | chr28:9137458-9137735 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 187 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 80, 9 |
Conread position: | 382-831 |
Cow position: | chr28:2990428-2990877 (view UCSC Genome Browser custom track) |
Alignm length: | 458 |
Alignm identity: | 349 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 128, 159 |
Conread position: | 382-843 |
Cow position: | chr28:8721924-8722368 (view UCSC Genome Browser custom track) |
Alignm length: | 469 |
Alignm identity: | 345 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 97, 69 |
Conread position: | 382-845 |
Cow position: | chr28:10619570-10620031 (view UCSC Genome Browser custom track) |
Alignm length: | 468 |
Alignm identity: | 361 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 222, 142 |
Conread position: | 382-1017 |
Cow position: | chr28:5812245-5811595 (view UCSC Genome Browser custom track) |
Alignm length: | 658 |
Alignm identity: | 487 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 124 |
Conread position: | 382-1021 |
Cow position: | chr28:24667146-24666509 (view UCSC Genome Browser custom track) |
Alignm length: | 661 |
Alignm identity: | 480 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 109, 14 |
Conread position: | 384-534 |
Cow position: | chr28:9953700-9953550 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 116 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 384-562 |
Cow position: | chr28:781933-781749 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 131 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 116, 110 |
Conread position: | 384-562 |
Cow position: | chr28:5752624-5752804 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 132 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 128, 173 |
Conread position: | 384-562 |
Cow position: | chr28:33251855-33251674 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 133 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 127, 0 |
Conread position: | 384-622 |
Cow position: | chr28:1504177-1503933 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 170 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 127, 195 |
Conread position: | 384-631 |
Cow position: | chr28:8378102-8377847 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 177 |
Alignm E-value: | 9e-28 |
Alignm gaps (pig, cow): | 46, 222 |
Conread position: | 384-631 |
Cow position: | chr28:15378478-15378731 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 173 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 128, 122 |
Conread position: | 384-632 |
Cow position: | chr28:5245092-5244839 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 175 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 129, 219 |
Conread position: | 384-632 |
Cow position: | chr28:14706131-14706390 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 184 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 91, 224 |
Conread position: | 384-632 |
Cow position: | chr28:22261615-22261853 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 174 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 38, 0 |
Conread position: | 384-632 |
Cow position: | chr28:26426725-26426970 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 173 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 136, 68 |
Conread position: | 384-632 |
Cow position: | chr28:32792843-32793086 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 172 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 128, 45 |
Conread position: | 384-634 |
Cow position: | chr28:13522269-13522021 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 170 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 98, 60 |
Conread position: | 384-639 |
Cow position: | chr28:5565397-5565141 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 182 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 116, 110 |
Conread position: | 384-786 |
Cow position: | chr28:13441374-13441779 (view UCSC Genome Browser custom track) |
Alignm length: | 409 |
Alignm identity: | 268 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 133, 128 |
Conread position: | 384-850 |
Cow position: | chr28:488993-488525 (view UCSC Genome Browser custom track) |
Alignm length: | 472 |
Alignm identity: | 300 |
Alignm E-value: | 5.04467e-44 |
Alignm gaps (pig, cow): | 177, 200 |
Conread position: | 384-850 |
Cow position: | chr28:1952646-1952183 (view UCSC Genome Browser custom track) |
Alignm length: | 474 |
Alignm identity: | 303 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 44, 181 |
Conread position: | 384-850 |
Cow position: | chr28:6663794-6663326 (view UCSC Genome Browser custom track) |
Alignm length: | 473 |
Alignm identity: | 303 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 133, 128 |
Conread position: | 384-850 |
Cow position: | chr28:15950484-15950016 (view UCSC Genome Browser custom track) |
Alignm length: | 473 |
Alignm identity: | 299 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 133, 128 |
Conread position: | 386-847 |
Cow position: | chr28:7820989-7820529 (view UCSC Genome Browser custom track) |
Alignm length: | 465 |
Alignm identity: | 303 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 203, 176 |
Conread position: | 388-655 |
Cow position: | chr28:7727238-7727513 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 178 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 94, 234 |
Conread position: | 389-559 |
Cow position: | chr28:3193244-3193413 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 126 |
Alignm E-value: | 7e-26 |
Alignm gaps (pig, cow): | 111, 103 |
Conread position: | 389-562 |
Cow position: | chr28:10582450-10582628 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 129 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 123, 0 |
Conread position: | 389-562 |
Cow position: | chr28:13459505-13459327 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 130 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 111, 105 |
Conread position: | 389-562 |
Cow position: | chr28:15035885-15036067 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 133 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 111, 103 |
Conread position: | 389-632 |
Cow position: | chr28:12149860-12149613 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 175 |
Alignm E-value: | 5e-33 |
Alignm gaps (pig, cow): | 123, 212 |
Conread position: | 391-1004 |
Cow position: | chr28:21358544-21357913 (view UCSC Genome Browser custom track) |
Alignm length: | 638 |
Alignm identity: | 481 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 181, 157 |
Conread position: | 392-562 |
Cow position: | chr28:28973697-28973861 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 125 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 97, 103 |
Conread position: | 393-604 |
Cow position: | chr28:9156886-9157097 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 151 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 393-632 |
Cow position: | chr28:5115545-5115787 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 169 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 118, 208 |
Conread position: | 393-632 |
Cow position: | chr28:17667985-17668226 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 172 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 119, 180 |
Conread position: | 394-632 |
Cow position: | chr28:29819100-29818858 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 165 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 100, 208 |
Conread position: | 396-538 |
Cow position: | chr28:34648473-34648332 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 107 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 396-634 |
Cow position: | chr28:2083128-2082876 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 172 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 118, 216 |
Conread position: | 475-952 |
Cow position: | chr28:17314424-17313926 (view UCSC Genome Browser custom track) |
Alignm length: | 511 |
Alignm identity: | 346 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 62, 263 |
Conread position: | 566-1018 |
Cow position: | chr28:25784869-25784409 (view UCSC Genome Browser custom track) |
Alignm length: | 476 |
Alignm identity: | 304 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 40, 9 |
Conread position: | 569-850 |
Cow position: | chr28:26006814-26006531 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 213 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 6 |
Conread position: | 581-888 |
Cow position: | chr28:1388026-1388334 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 225 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 21, 167 |
Conread position: | 709-1017 |
Cow position: | chr28:25706019-25706336 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 215 |
Alignm E-value: | 9e-28 |
Alignm gaps (pig, cow): | 142, 52 |
Show alignments to all cow chromosomes.