Cow genome map
Conread name: | Ss1.1-Thy1-THY010003G05.5 |
Conread position: | 344-523 |
Cow position: | chr5:27060718-27060891 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 132 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 37, 107 |
Conread position: | 370-534 |
Cow position: | chr5:23688145-23688310 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 120 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 11, 20 |
Conread position: | 370-651 |
Cow position: | chr5:41551565-41551845 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 201 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 102, 13 |
Conread position: | 370-848 |
Cow position: | chr5:49594132-49594607 (view UCSC Genome Browser custom track) |
Alignm length: | 492 |
Alignm identity: | 354 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 13 |
Conread position: | 370-850 |
Cow position: | chr5:54936211-54936691 (view UCSC Genome Browser custom track) |
Alignm length: | 485 |
Alignm identity: | 305 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 170, 13 |
Conread position: | 371-628 |
Cow position: | chr5:7273195-7272944 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 182 |
Alignm E-value: | 6e-28 |
Alignm gaps (pig, cow): | 143, 10 |
Conread position: | 372-521 |
Cow position: | chr5:27000534-27000386 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 112 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 13, 0 |
Conread position: | 372-777 |
Cow position: | chr5:29456952-29456549 (view UCSC Genome Browser custom track) |
Alignm length: | 411 |
Alignm identity: | 313 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 231, 8 |
Conread position: | 372-818 |
Cow position: | chr5:41530243-41530682 (view UCSC Genome Browser custom track) |
Alignm length: | 454 |
Alignm identity: | 347 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 11 |
Conread position: | 374-651 |
Cow position: | chr5:28030845-28030570 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 190 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 9, 172 |
Conread position: | 375-631 |
Cow position: | chr5:12184571-12184310 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 178 |
Alignm E-value: | 6e-28 |
Alignm gaps (pig, cow): | 137, 228 |
Conread position: | 375-703 |
Cow position: | chr5:23716625-23716945 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 243 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 231, 29 |
Conread position: | 382-586 |
Cow position: | chr5:13607438-13607642 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 144 |
Alignm E-value: | 8e-30 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 382-595 |
Cow position: | chr5:39165448-39165660 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 148 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 170, 0 |
Conread position: | 382-644 |
Cow position: | chr5:12682182-12682448 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 201 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 225, 209 |
Conread position: | 382-649 |
Cow position: | chr5:49181628-49181365 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 183 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 154, 0 |
Conread position: | 382-651 |
Cow position: | chr5:27652631-27652893 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 195 |
Alignm E-value: | 7e-40 |
Alignm gaps (pig, cow): | 224, 82 |
Conread position: | 382-736 |
Cow position: | chr5:12644788-12645155 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 261 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 10, 159 |
Conread position: | 383-638 |
Cow position: | chr5:46659020-46658776 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 202 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 222, 31 |
Conread position: | 384-545 |
Cow position: | chr5:48809390-48809553 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 119 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 128, 0 |
Conread position: | 384-551 |
Cow position: | chr5:2530562-2530395 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 124 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 384-562 |
Cow position: | chr5:1342477-1342656 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 131 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 116, 33 |
Conread position: | 384-562 |
Cow position: | chr5:30578644-30578464 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 133 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 116, 29 |
Conread position: | 384-585 |
Cow position: | chr5:55149954-55150150 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 141 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 384-599 |
Cow position: | chr5:24097969-24097755 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 156 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 127, 51 |
Conread position: | 384-599 |
Cow position: | chr5:64782696-64782916 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 155 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 128, 78 |
Conread position: | 384-604 |
Cow position: | chr5:26769141-26768922 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 154 |
Alignm E-value: | 9e-31 |
Alignm gaps (pig, cow): | 173, 0 |
Conread position: | 384-623 |
Cow position: | chr5:34695905-34695664 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 176 |
Alignm E-value: | 5e-37 |
Alignm gaps (pig, cow): | 128, 216 |
Conread position: | 384-631 |
Cow position: | chr5:2430813-2431067 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 180 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 101, 68 |
Conread position: | 384-631 |
Cow position: | chr5:2913770-2913522 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 177 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 128, 215 |
Conread position: | 384-631 |
Cow position: | chr5:4068309-4068058 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 179 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 73, 91 |
Conread position: | 384-631 |
Cow position: | chr5:10918123-10917872 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 176 |
Alignm E-value: | 9e-31 |
Alignm gaps (pig, cow): | 128, 216 |
Conread position: | 384-632 |
Cow position: | chr5:3504923-3505171 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 178 |
Alignm E-value: | 9e-31 |
Alignm gaps (pig, cow): | 130, 38 |
Conread position: | 384-632 |
Cow position: | chr5:14500827-14501077 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 172 |
Alignm E-value: | 7e-29 |
Alignm gaps (pig, cow): | 44, 216 |
Conread position: | 384-632 |
Cow position: | chr5:49119957-49120207 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 181 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 94, 158 |
Conread position: | 384-632 |
Cow position: | chr5:55627324-55627076 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 176 |
Alignm E-value: | 7e-29 |
Alignm gaps (pig, cow): | 128, 78 |
Conread position: | 384-632 |
Cow position: | chr5:59282081-59281829 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 169 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 128, 219 |
Conread position: | 384-637 |
Cow position: | chr5:58195288-58195036 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 180 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 116, 63 |
Conread position: | 384-645 |
Cow position: | chr5:49123508-49123768 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 194 |
Alignm E-value: | 8.00001e-41 |
Alignm gaps (pig, cow): | 116, 108 |
Conread position: | 384-647 |
Cow position: | chr5:29008705-29008444 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 185 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 211, 151 |
Conread position: | 384-649 |
Cow position: | chr5:25207469-25207722 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 187 |
Alignm E-value: | 7e-29 |
Alignm gaps (pig, cow): | 58, 97 |
Conread position: | 384-649 |
Cow position: | chr5:32733901-32734164 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 189 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 222, 68 |
Conread position: | 384-649 |
Cow position: | chr5:45699349-45699089 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 192 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 118, 0 |
Conread position: | 384-649 |
Cow position: | chr5:52804674-52804419 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 193 |
Alignm E-value: | 8.00001e-41 |
Alignm gaps (pig, cow): | 7, 0 |
Conread position: | 384-651 |
Cow position: | chr5:27569525-27569259 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 186 |
Alignm E-value: | 7e-39 |
Alignm gaps (pig, cow): | 153, 0 |
Conread position: | 384-678 |
Cow position: | chr5:37755853-37756151 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 203 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 133, 128 |
Conread position: | 384-683 |
Cow position: | chr5:46663291-46662990 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 216 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 211, 272 |
Conread position: | 384-690 |
Cow position: | chr5:13383994-13384303 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 203 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 133, 128 |
Conread position: | 384-690 |
Cow position: | chr5:59144065-59143756 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 204 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 133, 66 |
Conread position: | 384-737 |
Cow position: | chr5:32674422-32674776 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 211, 120 |
Conread position: | 384-740 |
Cow position: | chr5:28006549-28006192 (view UCSC Genome Browser custom track) |
Alignm length: | 360 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 215, 152 |
Conread position: | 384-786 |
Cow position: | chr5:42504050-42503645 (view UCSC Genome Browser custom track) |
Alignm length: | 409 |
Alignm identity: | 256 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 133, 128 |
Conread position: | 384-797 |
Cow position: | chr5:3963758-3963346 (view UCSC Genome Browser custom track) |
Alignm length: | 417 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 211, 313 |
Conread position: | 384-809 |
Cow position: | chr5:14379454-14379027 (view UCSC Genome Browser custom track) |
Alignm length: | 430 |
Alignm identity: | 276 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 177, 181 |
Conread position: | 384-846 |
Cow position: | chr5:4019912-4020362 (view UCSC Genome Browser custom track) |
Alignm length: | 466 |
Alignm identity: | 293 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 205, 68 |
Conread position: | 384-847 |
Cow position: | chr5:10776958-10777421 (view UCSC Genome Browser custom track) |
Alignm length: | 467 |
Alignm identity: | 311 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 191, 341 |
Conread position: | 384-847 |
Cow position: | chr5:53714542-53714077 (view UCSC Genome Browser custom track) |
Alignm length: | 471 |
Alignm identity: | 302 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 133, 128 |
Conread position: | 384-850 |
Cow position: | chr5:308293-308761 (view UCSC Genome Browser custom track) |
Alignm length: | 472 |
Alignm identity: | 294 |
Alignm E-value: | 7e-39 |
Alignm gaps (pig, cow): | 133, 128 |
Conread position: | 384-850 |
Cow position: | chr5:4088157-4087694 (view UCSC Genome Browser custom track) |
Alignm length: | 474 |
Alignm identity: | 300 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 133, 47 |
Conread position: | 384-850 |
Cow position: | chr5:10443916-10444379 (view UCSC Genome Browser custom track) |
Alignm length: | 469 |
Alignm identity: | 304 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 218, 68 |
Conread position: | 384-850 |
Cow position: | chr5:18663533-18663064 (view UCSC Genome Browser custom track) |
Alignm length: | 473 |
Alignm identity: | 301 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 43, 210 |
Conread position: | 384-850 |
Cow position: | chr5:23960822-23961286 (view UCSC Genome Browser custom track) |
Alignm length: | 472 |
Alignm identity: | 299 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 177, 128 |
Conread position: | 384-850 |
Cow position: | chr5:27909982-27910448 (view UCSC Genome Browser custom track) |
Alignm length: | 471 |
Alignm identity: | 318 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 347 |
Conread position: | 384-850 |
Cow position: | chr5:45182819-45183286 (view UCSC Genome Browser custom track) |
Alignm length: | 470 |
Alignm identity: | 307 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 205, 376 |
Conread position: | 384-850 |
Cow position: | chr5:46006115-46006577 (view UCSC Genome Browser custom track) |
Alignm length: | 475 |
Alignm identity: | 321 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 214, 35 |
Conread position: | 384-850 |
Cow position: | chr5:47831807-47832274 (view UCSC Genome Browser custom track) |
Alignm length: | 470 |
Alignm identity: | 314 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 211, 376 |
Conread position: | 384-850 |
Cow position: | chr5:48468986-48469454 (view UCSC Genome Browser custom track) |
Alignm length: | 473 |
Alignm identity: | 299 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 132, 128 |
Conread position: | 384-851 |
Cow position: | chr5:10844587-10845055 (view UCSC Genome Browser custom track) |
Alignm length: | 473 |
Alignm identity: | 313 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 212, 256 |
Conread position: | 384-1019 |
Cow position: | chr5:41963611-41964247 (view UCSC Genome Browser custom track) |
Alignm length: | 654 |
Alignm identity: | 463 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 219, 197 |
Conread position: | 385-649 |
Cow position: | chr5:34202280-34202027 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 178 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 47, 0 |
Conread position: | 386-652 |
Cow position: | chr5:57483222-57483494 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 181 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 42, 110 |
Conread position: | 386-809 |
Cow position: | chr5:46775376-46774952 (view UCSC Genome Browser custom track) |
Alignm length: | 426 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 214, 371 |
Conread position: | 386-850 |
Cow position: | chr5:32771766-32771296 (view UCSC Genome Browser custom track) |
Alignm length: | 474 |
Alignm identity: | 308 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 80, 261 |
Conread position: | 386-850 |
Cow position: | chr5:35299065-35298602 (view UCSC Genome Browser custom track) |
Alignm length: | 468 |
Alignm identity: | 296 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 203, 151 |
Conread position: | 386-1020 |
Cow position: | chr5:61273852-61274499 (view UCSC Genome Browser custom track) |
Alignm length: | 654 |
Alignm identity: | 491 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 221, 375 |
Conread position: | 389-631 |
Cow position: | chr5:46739287-46739530 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 171 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 123, 169 |
Conread position: | 389-632 |
Cow position: | chr5:3785125-3784884 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 172 |
Alignm E-value: | 7e-29 |
Alignm gaps (pig, cow): | 123, 107 |
Conread position: | 389-632 |
Cow position: | chr5:54793304-54793546 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 179 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 93, 63 |
Conread position: | 389-735 |
Cow position: | chr5:4384540-4384191 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 110, 64 |
Conread position: | 389-850 |
Cow position: | chr5:31705858-31705392 (view UCSC Genome Browser custom track) |
Alignm length: | 470 |
Alignm identity: | 308 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 212, 91 |
Conread position: | 396-852 |
Cow position: | chr5:32945190-32944719 (view UCSC Genome Browser custom track) |
Alignm length: | 478 |
Alignm identity: | 318 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 199, 172 |
Conread position: | 398-634 |
Cow position: | chr5:25917006-25916779 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 175 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 78, 70 |
Conread position: | 531-852 |
Cow position: | chr5:46631380-46631697 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 228 |
Alignm E-value: | 8.00001e-41 |
Alignm gaps (pig, cow): | 74, 27 |
Conread position: | 577-1029 |
Cow position: | chr5:27061499-27061977 (view UCSC Genome Browser custom track) |
Alignm length: | 483 |
Alignm identity: | 324 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 18, 187 |
Conread position: | 646-952 |
Cow position: | chr5:23688504-23688794 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 216 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 208, 54 |
Conread position: | 647-1040 |
Cow position: | chr5:28044909-28045327 (view UCSC Genome Browser custom track) |
Alignm length: | 426 |
Alignm identity: | 283 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 205, 110 |
Conread position: | 732-1019 |
Cow position: | chr5:46658158-46657856 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 223 |
Alignm E-value: | 7e-40 |
Alignm gaps (pig, cow): | 60, 27 |
Show alignments to all cow chromosomes.