Cow genome map
| Conread name: | Ss1.1-Thy1-THY010003G05.5 |
| Conread position: | 370-487 |
| Cow position: | |
| Alignm length: | 118 |
| Alignm identity: | 93 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 370-667 |
| Cow position: | |
| Alignm length: | 303 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 236, 13 |
| Conread position: | 370-850 |
| Cow position: | |
| Alignm length: | 486 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 13 |
| Conread position: | 371-632 |
| Cow position: | |
| Alignm length: | 271 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 22, 55 |
| Conread position: | 371-683 |
| Cow position: | |
| Alignm length: | 322 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 22, 55 |
| Conread position: | 371-844 |
| Cow position: | |
| Alignm length: | 484 |
| Alignm identity: | 313 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 182, 7 |
| Conread position: | 371-849 |
| Cow position: | |
| Alignm length: | 485 |
| Alignm identity: | 310 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 57, 7 |
| Conread position: | 372-508 |
| Cow position: | |
| Alignm length: | 137 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 372-651 |
| Cow position: | |
| Alignm length: | 293 |
| Alignm identity: | 206 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 138, 8 |
| Conread position: | 374-632 |
| Cow position: | |
| Alignm length: | 261 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 11, 155 |
| Conread position: | 374-645 |
| Cow position: | |
| Alignm length: | 277 |
| Alignm identity: | 196 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 14, 129 |
| Conread position: | 374-646 |
| Cow position: | |
| Alignm length: | 273 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 375-559 |
| Cow position: | |
| Alignm length: | 189 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 375-736 |
| Cow position: | |
| Alignm length: | 365 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 227, 140 |
| Conread position: | 375-784 |
| Cow position: | |
| Alignm length: | 411 |
| Alignm identity: | 267 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 331, 177 |
| Conread position: | 382-520 |
| Cow position: | |
| Alignm length: | 141 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 382-649 |
| Cow position: | |
| Alignm length: | 271 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 24, 75 |
| Conread position: | 382-649 |
| Cow position: | |
| Alignm length: | 270 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 50, 157 |
| Conread position: | 382-780 |
| Cow position: | |
| Alignm length: | 405 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 184 |
| Conread position: | 382-1006 |
| Cow position: | |
| Alignm length: | 650 |
| Alignm identity: | 445 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 59 |
| Conread position: | 384-488 |
| Cow position: | |
| Alignm length: | 105 |
| Alignm identity: | 85 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 384-518 |
| Cow position: | |
| Alignm length: | 136 |
| Alignm identity: | 102 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 116, 110 |
| Conread position: | 384-522 |
| Cow position: | |
| Alignm length: | 139 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 384-562 |
| Cow position: | |
| Alignm length: | 184 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 384-562 |
| Cow position: | |
| Alignm length: | 184 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 127, 175 |
| Conread position: | 384-578 |
| Cow position: | |
| Alignm length: | 195 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 384-605 |
| Cow position: | |
| Alignm length: | 222 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 207, 0 |
| Conread position: | 384-624 |
| Cow position: | |
| Alignm length: | 244 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 128, 200 |
| Conread position: | 384-631 |
| Cow position: | |
| Alignm length: | 251 |
| Alignm identity: | 174 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 92, 84 |
| Conread position: | 384-631 |
| Cow position: | |
| Alignm length: | 252 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 132, 216 |
| Conread position: | 384-631 |
| Cow position: | |
| Alignm length: | 248 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 384-631 |
| Cow position: | |
| Alignm length: | 256 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 128, 218 |
| Conread position: | 384-631 |
| Cow position: | |
| Alignm length: | 258 |
| Alignm identity: | 179 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 127, 222 |
| Conread position: | 384-631 |
| Cow position: | |
| Alignm length: | 252 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 134, 216 |
| Conread position: | 384-631 |
| Cow position: | |
| Alignm length: | 254 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 94, 217 |
| Conread position: | 384-631 |
| Cow position: | |
| Alignm length: | 253 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 128, 82 |
| Conread position: | 384-631 |
| Cow position: | |
| Alignm length: | 255 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 44, 221 |
| Conread position: | 384-632 |
| Cow position: | |
| Alignm length: | 255 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 92, 84 |
| Conread position: | 384-632 |
| Cow position: | |
| Alignm length: | 251 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 135, 214 |
| Conread position: | 384-632 |
| Cow position: | |
| Alignm length: | 262 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 69, 225 |
| Conread position: | 384-632 |
| Cow position: | |
| Alignm length: | 252 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 128, 43 |
| Conread position: | 384-649 |
| Cow position: | |
| Alignm length: | 270 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 118, 125 |
| Conread position: | 384-651 |
| Cow position: | |
| Alignm length: | 268 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 152, 0 |
| Conread position: | 384-651 |
| Cow position: | |
| Alignm length: | 279 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 98, 163 |
| Conread position: | 384-689 |
| Cow position: | |
| Alignm length: | 311 |
| Alignm identity: | 203 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 133, 128 |
| Conread position: | 384-690 |
| Cow position: | |
| Alignm length: | 313 |
| Alignm identity: | 205 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 133, 128 |
| Conread position: | 384-690 |
| Cow position: | |
| Alignm length: | 313 |
| Alignm identity: | 204 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 133, 128 |
| Conread position: | 384-697 |
| Cow position: | |
| Alignm length: | 319 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 133, 128 |
| Conread position: | 384-735 |
| Cow position: | |
| Alignm length: | 358 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 44, 166 |
| Conread position: | 384-786 |
| Cow position: | |
| Alignm length: | 405 |
| Alignm identity: | 264 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 208, 232 |
| Conread position: | 384-786 |
| Cow position: | |
| Alignm length: | 407 |
| Alignm identity: | 259 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 87, 63 |
| Conread position: | 384-786 |
| Cow position: | |
| Alignm length: | 417 |
| Alignm identity: | 263 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 59, 138 |
| Conread position: | 384-786 |
| Cow position: | |
| Alignm length: | 408 |
| Alignm identity: | 262 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 133, 102 |
| Conread position: | 384-847 |
| Cow position: | |
| Alignm length: | 467 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 54 |
| Conread position: | 384-847 |
| Cow position: | |
| Alignm length: | 467 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 375 |
| Conread position: | 384-850 |
| Cow position: | |
| Alignm length: | 470 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 106 |
| Conread position: | 384-850 |
| Cow position: | |
| Alignm length: | 473 |
| Alignm identity: | 298 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 133, 128 |
| Conread position: | 384-850 |
| Cow position: | |
| Alignm length: | 470 |
| Alignm identity: | 292 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 205, 80 |
| Conread position: | 384-850 |
| Cow position: | |
| Alignm length: | 471 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 182 |
| Conread position: | 384-850 |
| Cow position: | |
| Alignm length: | 470 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 212, 69 |
| Conread position: | 384-850 |
| Cow position: | |
| Alignm length: | 472 |
| Alignm identity: | 296 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 133, 128 |
| Conread position: | 384-850 |
| Cow position: | |
| Alignm length: | 470 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 153 |
| Conread position: | 384-850 |
| Cow position: | |
| Alignm length: | 470 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 370 |
| Conread position: | 384-850 |
| Cow position: | |
| Alignm length: | 470 |
| Alignm identity: | 287 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 207, 242 |
| Conread position: | 384-850 |
| Cow position: | |
| Alignm length: | 470 |
| Alignm identity: | 294 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 205, 376 |
| Conread position: | 384-850 |
| Cow position: | |
| Alignm length: | 472 |
| Alignm identity: | 301 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 177, 193 |
| Conread position: | 384-850 |
| Cow position: | |
| Alignm length: | 470 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 43 |
| Conread position: | 384-851 |
| Cow position: | |
| Alignm length: | 470 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 68 |
| Conread position: | 384-1015 |
| Cow position: | |
| Alignm length: | 648 |
| Alignm identity: | 480 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 211, 48 |
| Conread position: | 386-850 |
| Cow position: | |
| Alignm length: | 468 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 215, 120 |
| Conread position: | 387-521 |
| Cow position: | |
| Alignm length: | 135 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 387-540 |
| Cow position: | |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 389-559 |
| Cow position: | |
| Alignm length: | 175 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 111, 105 |
| Conread position: | 389-583 |
| Cow position: | |
| Alignm length: | 200 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 123, 148 |
| Conread position: | 389-600 |
| Cow position: | |
| Alignm length: | 222 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 89, 5 |
| Conread position: | 389-631 |
| Cow position: | |
| Alignm length: | 249 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 97, 139 |
| Conread position: | 389-632 |
| Cow position: | |
| Alignm length: | 252 |
| Alignm identity: | 178 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 123, 189 |
| Conread position: | 389-652 |
| Cow position: | |
| Alignm length: | 273 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 75, 222 |
| Conread position: | 389-652 |
| Cow position: | |
| Alignm length: | 273 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 34, 98 |
| Conread position: | 389-786 |
| Cow position: | |
| Alignm length: | 401 |
| Alignm identity: | 259 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 200, 135 |
| Conread position: | 390-672 |
| Cow position: | |
| Alignm length: | 296 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 92, 217 |
| Conread position: | 392-632 |
| Cow position: | |
| Alignm length: | 244 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 120, 209 |
| Conread position: | 393-559 |
| Cow position: | |
| Alignm length: | 175 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 87, 76 |
| Conread position: | 393-632 |
| Cow position: | |
| Alignm length: | 244 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 119, 207 |
| Conread position: | 396-632 |
| Cow position: | |
| Alignm length: | 241 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 116, 204 |
| Conread position: | 399-609 |
| Cow position: | |
| Alignm length: | 216 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 37, 46 |
| Conread position: | 453-812 |
| Cow position: | |
| Alignm length: | 365 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 118 |
| Conread position: | 473-850 |
| Cow position: | |
| Alignm length: | 381 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 116, 168 |
| Conread position: | 549-1018 |
| Cow position: | |
| Alignm length: | 488 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 26 |
| Conread position: | 559-835 |
| Cow position: | |
| Alignm length: | 281 |
| Alignm identity: | 204 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 46, 16 |
| Conread position: | 662-975 |
| Cow position: | |
| Alignm length: | 324 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 16, 23 |
| Conread position: | 705-1017 |
| Cow position: | |
| Alignm length: | 329 |
| Alignm identity: | 239 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 95, 51 |
| Conread position: | 728-865 |
| Cow position: | |
| Alignm length: | 141 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 96, 33 |
Show alignments to all cow chromosomes.