Cow genome map

Conread name: Ss1.1-Thy1-THY010003G05.5

Conread position: 370-537
Cow position: chr8:23766594-23766760 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 123
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 9, 90

Conread position: 370-645
Cow position: chr8:51860220-51860492 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 12

Conread position: 371-651
Cow position: chr8:27924885-27924608 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 189
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 14, 44

Conread position: 372-489
Cow position: chr8:13735397-13735281 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 10, 0

Conread position: 372-1022
Cow position: chr8:11970821-11971470 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 8

Conread position: 374-634
Cow position: chr8:42161903-42162161 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 189

Conread position: 375-667
Cow position: chr8:61036144-61036433 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 170

Conread position: 375-850
Cow position: chr8:32634951-32635427 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 385

Conread position: 375-850
Cow position: chr8:44121601-44121136 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 136

Conread position: 382-508
Cow position: chr8:8316885-8317011 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 382-513
Cow position: chr8:32930267-32930139 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 382-521
Cow position: chr8:8904761-8904897 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 64, 0

Conread position: 382-596
Cow position: chr8:44077284-44077486 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 162
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 140, 34

Conread position: 382-651
Cow position: chr8:47670219-47669952 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 189
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 153, 0

Conread position: 382-651
Cow position: chr8:47884750-47884479 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 193
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 220, 96

Conread position: 382-709
Cow position: chr8:19229541-19229230 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 325, 177

Conread position: 382-826
Cow position: chr8:11761104-11760677 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 297
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 211, 329

Conread position: 382-852
Cow position: chr8:11757452-11756974 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 85

Conread position: 382-852
Cow position: chr8:46093109-46093571 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 53

Conread position: 383-578
Cow position: chr8:45448204-45447997 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 153
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 66, 0

Conread position: 384-518
Cow position: chr8:23770378-23770244 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 102
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 116, 110

Conread position: 384-522
Cow position: chr8:38607789-38607924 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 118
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 82, 0

Conread position: 384-534
Cow position: chr8:53427066-53426916 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 384-535
Cow position: chr8:27984075-27984225 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 80, 0

Conread position: 384-562
Cow position: chr8:8402461-8402645 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 131
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 127, 0

Conread position: 384-562
Cow position: chr8:24916590-24916773 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 110, 116

Conread position: 384-562
Cow position: chr8:39196673-39196855 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 128, 35

Conread position: 384-579
Cow position: chr8:59263154-59263353 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 143
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 116, 108

Conread position: 384-593
Cow position: chr8:14929289-14929504 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 154
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 116, 108

Conread position: 384-596
Cow position: chr8:44244833-44245048 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 157
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 128, 0

Conread position: 384-599
Cow position: chr8:47662587-47662812 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 154
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 66, 0

Conread position: 384-624
Cow position: chr8:32319809-32320060 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 175
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 130, 225

Conread position: 384-624
Cow position: chr8:33588116-33587877 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 161
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 128, 85

Conread position: 384-630
Cow position: chr8:29441089-29441333 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 170
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 128, 28

Conread position: 384-631
Cow position: chr8:4686133-4685879 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 174
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 128, 10

Conread position: 384-631
Cow position: chr8:38390110-38389862 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 173
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 128, 215

Conread position: 384-631
Cow position: chr8:50993534-50993288 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 174
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 128, 108

Conread position: 384-632
Cow position: chr8:8909975-8909727 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 170
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 38, 217

Conread position: 384-632
Cow position: chr8:10743872-10744116 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 174
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 140, 0

Conread position: 384-632
Cow position: chr8:19328693-19328442 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 176
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 94, 60

Conread position: 384-632
Cow position: chr8:25522138-25521886 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 179
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 128, 193

Conread position: 384-632
Cow position: chr8:45796004-45796255 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 175
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 116, 108

Conread position: 384-632
Cow position: chr8:49214167-49213921 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 177
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 31, 113

Conread position: 384-634
Cow position: chr8:60059942-60059690 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 181
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 128, 14

Conread position: 384-636
Cow position: chr8:25777136-25777386 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 172
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 212, 0

Conread position: 384-649
Cow position: chr8:44037002-44037264 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 185
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 43, 0

Conread position: 384-649
Cow position: chr8:45188824-45188563 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 183
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 78, 43

Conread position: 384-649
Cow position: chr8:45317361-45317622 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 184
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 152, 0

Conread position: 384-651
Cow position: chr8:8596147-8596421 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 188
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 44, 85

Conread position: 384-651
Cow position: chr8:23216521-23216259 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 191
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 220, 35

Conread position: 384-656
Cow position: chr8:11800972-11800698 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 202
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 116, 110

Conread position: 384-691
Cow position: chr8:29581760-29581454 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 202
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 101, 129

Conread position: 384-702
Cow position: chr8:14592671-14592986 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 212
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 128, 216

Conread position: 384-714
Cow position: chr8:24421046-24421380 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 85

Conread position: 384-771
Cow position: chr8:8656510-8656901 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 250
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 133, 125

Conread position: 384-846
Cow position: chr8:2885457-2885010 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 294
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 149, 0

Conread position: 384-847
Cow position: chr8:26007057-26007523 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 378

Conread position: 384-847
Cow position: chr8:27578115-27577650 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 207

Conread position: 384-847
Cow position: chr8:37930628-37930164 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 376

Conread position: 384-850
Cow position: chr8:1154565-1155032 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 298
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 205, 272

Conread position: 384-850
Cow position: chr8:1318745-1318279 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 296
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 205, 128

Conread position: 384-850
Cow position: chr8:8518864-8519330 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 68

Conread position: 384-850
Cow position: chr8:8557424-8557889 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 292
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 215, 169

Conread position: 384-850
Cow position: chr8:8592998-8593466 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 297
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 133, 128

Conread position: 384-850
Cow position: chr8:9274726-9274260 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 300
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 133, 128

Conread position: 384-850
Cow position: chr8:22572614-22573080 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 367

Conread position: 384-850
Cow position: chr8:32439736-32440203 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 318

Conread position: 384-850
Cow position: chr8:37657555-37658022 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 376

Conread position: 384-850
Cow position: chr8:47070103-47070568 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 69

Conread position: 384-850
Cow position: chr8:47073976-47073512 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 43

Conread position: 384-851
Cow position: chr8:46945423-46945887 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 189

Conread position: 385-610
Cow position: chr8:12504706-12504480 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 153
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 210, 120

Conread position: 385-850
Cow position: chr8:9734954-9734490 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 37

Conread position: 386-605
Cow position: chr8:9540766-9540977 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 172
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 115, 0

Conread position: 386-724
Cow position: chr8:30490970-30491307 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 225
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 130, 192

Conread position: 386-758
Cow position: chr8:1581483-1581112 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 51

Conread position: 386-850
Cow position: chr8:10748088-10747624 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 67

Conread position: 389-631
Cow position: chr8:38087859-38087614 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 176
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 123, 187

Conread position: 389-632
Cow position: chr8:3784314-3784069 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 180
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 123, 65

Conread position: 389-632
Cow position: chr8:17310770-17310527 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 177
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 52, 62

Conread position: 392-599
Cow position: chr8:36637927-36638139 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 150
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 120, 0

Conread position: 396-614
Cow position: chr8:45161636-45161854 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 148
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 146, 74

Conread position: 396-632
Cow position: chr8:3857287-3857523 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 170
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 118, 32

Conread position: 398-631
Cow position: chr8:12449179-12448946 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 165
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 116, 201

Conread position: 399-562
Cow position: chr8:19050203-19050038 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 119
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 121, 0

Conread position: 405-635
Cow position: chr8:33429642-33429408 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 0

Conread position: 417-784
Cow position: chr8:11815083-11814719 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 245
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 183, 92

Conread position: 530-868
Cow position: chr8:44692766-44692418 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 45

Conread position: 534-1018
Cow position: chr8:50752298-50751784 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 350
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 102, 17

Conread position: 534-1021
Cow position: chr8:45161929-45162413 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 44

Conread position: 551-770
Cow position: chr8:27091778-27091999 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 161
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 38, 24

Conread position: 554-868
Cow position: chr8:25541541-25541225 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 21

Conread position: 558-1018
Cow position: chr8:38608388-38608857 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 17

Conread position: 575-849
Cow position: chr8:8905529-8905806 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 191
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 29, 76

Conread position: 578-740
Cow position: chr8:26623180-26623017 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 129
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 28, 153

Conread position: 646-846
Cow position: chr8:9540956-9541153 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 157
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 111, 0

Conread position: 662-841
Cow position: chr8:61036401-61036584 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 134
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 25, 98

Conread position: 709-842
Cow position: chr8:53426667-53426535 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 735-850
Cow position: chr8:42162212-42162326 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 96
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 24, 0

Show alignments to all cow chromosomes.