Cow genome map
| Conread name: | Ss1.1-Thy1-THY010003G05.5 |
| Conread position: | 370-537 |
| Cow position: | |
| Alignm length: | 170 |
| Alignm identity: | 123 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 9, 90 |
| Conread position: | 370-645 |
| Cow position: | |
| Alignm length: | 277 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 236, 12 |
| Conread position: | 371-651 |
| Cow position: | |
| Alignm length: | 284 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 14, 44 |
| Conread position: | 372-489 |
| Cow position: | |
| Alignm length: | 118 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 372-1022 |
| Cow position: | |
| Alignm length: | 678 |
| Alignm identity: | 492 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 8 |
| Conread position: | 374-634 |
| Cow position: | |
| Alignm length: | 262 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 189 |
| Conread position: | 375-667 |
| Cow position: | |
| Alignm length: | 297 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 231, 170 |
| Conread position: | 375-850 |
| Cow position: | |
| Alignm length: | 479 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 226, 385 |
| Conread position: | 375-850 |
| Cow position: | |
| Alignm length: | 477 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 136 |
| Conread position: | 382-508 |
| Cow position: | |
| Alignm length: | 127 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 382-513 |
| Cow position: | |
| Alignm length: | 132 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 382-521 |
| Cow position: | |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 382-596 |
| Cow position: | |
| Alignm length: | 216 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 140, 34 |
| Conread position: | 382-651 |
| Cow position: | |
| Alignm length: | 270 |
| Alignm identity: | 189 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 153, 0 |
| Conread position: | 382-651 |
| Cow position: | |
| Alignm length: | 273 |
| Alignm identity: | 193 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 220, 96 |
| Conread position: | 382-709 |
| Cow position: | |
| Alignm length: | 329 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 325, 177 |
| Conread position: | 382-826 |
| Cow position: | |
| Alignm length: | 448 |
| Alignm identity: | 297 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 211, 329 |
| Conread position: | 382-852 |
| Cow position: | |
| Alignm length: | 481 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 85 |
| Conread position: | 382-852 |
| Cow position: | |
| Alignm length: | 476 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 53 |
| Conread position: | 383-578 |
| Cow position: | |
| Alignm length: | 208 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 384-518 |
| Cow position: | |
| Alignm length: | 136 |
| Alignm identity: | 102 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 116, 110 |
| Conread position: | 384-522 |
| Cow position: | |
| Alignm length: | 139 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 384-534 |
| Cow position: | |
| Alignm length: | 151 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 384-535 |
| Cow position: | |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 384-562 |
| Cow position: | |
| Alignm length: | 185 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 384-562 |
| Cow position: | |
| Alignm length: | 186 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 110, 116 |
| Conread position: | 384-562 |
| Cow position: | |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 128, 35 |
| Conread position: | 384-579 |
| Cow position: | |
| Alignm length: | 201 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 116, 108 |
| Conread position: | 384-593 |
| Cow position: | |
| Alignm length: | 217 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 116, 108 |
| Conread position: | 384-596 |
| Cow position: | |
| Alignm length: | 216 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 384-599 |
| Cow position: | |
| Alignm length: | 226 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 384-624 |
| Cow position: | |
| Alignm length: | 254 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 130, 225 |
| Conread position: | 384-624 |
| Cow position: | |
| Alignm length: | 243 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 128, 85 |
| Conread position: | 384-630 |
| Cow position: | |
| Alignm length: | 250 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 128, 28 |
| Conread position: | 384-631 |
| Cow position: | |
| Alignm length: | 258 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 128, 10 |
| Conread position: | 384-631 |
| Cow position: | |
| Alignm length: | 251 |
| Alignm identity: | 173 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 128, 215 |
| Conread position: | 384-631 |
| Cow position: | |
| Alignm length: | 252 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 128, 108 |
| Conread position: | 384-632 |
| Cow position: | |
| Alignm length: | 252 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 38, 217 |
| Conread position: | 384-632 |
| Cow position: | |
| Alignm length: | 249 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 384-632 |
| Cow position: | |
| Alignm length: | 255 |
| Alignm identity: | 176 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 94, 60 |
| Conread position: | 384-632 |
| Cow position: | |
| Alignm length: | 256 |
| Alignm identity: | 179 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 128, 193 |
| Conread position: | 384-632 |
| Cow position: | |
| Alignm length: | 255 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 116, 108 |
| Conread position: | 384-632 |
| Cow position: | |
| Alignm length: | 253 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 31, 113 |
| Conread position: | 384-634 |
| Cow position: | |
| Alignm length: | 256 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 128, 14 |
| Conread position: | 384-636 |
| Cow position: | |
| Alignm length: | 253 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 212, 0 |
| Conread position: | 384-649 |
| Cow position: | |
| Alignm length: | 266 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 384-649 |
| Cow position: | |
| Alignm length: | 269 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 78, 43 |
| Conread position: | 384-649 |
| Cow position: | |
| Alignm length: | 266 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 152, 0 |
| Conread position: | 384-651 |
| Cow position: | |
| Alignm length: | 277 |
| Alignm identity: | 188 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 44, 85 |
| Conread position: | 384-651 |
| Cow position: | |
| Alignm length: | 269 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 220, 35 |
| Conread position: | 384-656 |
| Cow position: | |
| Alignm length: | 277 |
| Alignm identity: | 202 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 116, 110 |
| Conread position: | 384-691 |
| Cow position: | |
| Alignm length: | 314 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 101, 129 |
| Conread position: | 384-702 |
| Cow position: | |
| Alignm length: | 323 |
| Alignm identity: | 212 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 128, 216 |
| Conread position: | 384-714 |
| Cow position: | |
| Alignm length: | 340 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 85 |
| Conread position: | 384-771 |
| Cow position: | |
| Alignm length: | 395 |
| Alignm identity: | 250 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 133, 125 |
| Conread position: | 384-846 |
| Cow position: | |
| Alignm length: | 463 |
| Alignm identity: | 294 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 149, 0 |
| Conread position: | 384-847 |
| Cow position: | |
| Alignm length: | 469 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 378 |
| Conread position: | 384-847 |
| Cow position: | |
| Alignm length: | 469 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 207 |
| Conread position: | 384-847 |
| Cow position: | |
| Alignm length: | 467 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 376 |
| Conread position: | 384-850 |
| Cow position: | |
| Alignm length: | 471 |
| Alignm identity: | 298 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 205, 272 |
| Conread position: | 384-850 |
| Cow position: | |
| Alignm length: | 470 |
| Alignm identity: | 296 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 205, 128 |
| Conread position: | 384-850 |
| Cow position: | |
| Alignm length: | 470 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 68 |
| Conread position: | 384-850 |
| Cow position: | |
| Alignm length: | 471 |
| Alignm identity: | 292 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 215, 169 |
| Conread position: | 384-850 |
| Cow position: | |
| Alignm length: | 474 |
| Alignm identity: | 297 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 133, 128 |
| Conread position: | 384-850 |
| Cow position: | |
| Alignm length: | 472 |
| Alignm identity: | 300 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 133, 128 |
| Conread position: | 384-850 |
| Cow position: | |
| Alignm length: | 470 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 367 |
| Conread position: | 384-850 |
| Cow position: | |
| Alignm length: | 471 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 318 |
| Conread position: | 384-850 |
| Cow position: | |
| Alignm length: | 470 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 376 |
| Conread position: | 384-850 |
| Cow position: | |
| Alignm length: | 470 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 69 |
| Conread position: | 384-850 |
| Cow position: | |
| Alignm length: | 471 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 43 |
| Conread position: | 384-851 |
| Cow position: | |
| Alignm length: | 471 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 189 |
| Conread position: | 385-610 |
| Cow position: | |
| Alignm length: | 229 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 210, 120 |
| Conread position: | 385-850 |
| Cow position: | |
| Alignm length: | 469 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 37 |
| Conread position: | 386-605 |
| Cow position: | |
| Alignm length: | 220 |
| Alignm identity: | 172 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 386-724 |
| Cow position: | |
| Alignm length: | 341 |
| Alignm identity: | 225 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 130, 192 |
| Conread position: | 386-758 |
| Cow position: | |
| Alignm length: | 376 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 215, 51 |
| Conread position: | 386-850 |
| Cow position: | |
| Alignm length: | 469 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 67 |
| Conread position: | 389-631 |
| Cow position: | |
| Alignm length: | 249 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 123, 187 |
| Conread position: | 389-632 |
| Cow position: | |
| Alignm length: | 249 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 123, 65 |
| Conread position: | 389-632 |
| Cow position: | |
| Alignm length: | 250 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 52, 62 |
| Conread position: | 392-599 |
| Cow position: | |
| Alignm length: | 213 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 396-614 |
| Cow position: | |
| Alignm length: | 221 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 146, 74 |
| Conread position: | 396-632 |
| Cow position: | |
| Alignm length: | 242 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 118, 32 |
| Conread position: | 398-631 |
| Cow position: | |
| Alignm length: | 237 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 116, 201 |
| Conread position: | 399-562 |
| Cow position: | |
| Alignm length: | 166 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 405-635 |
| Cow position: | |
| Alignm length: | 235 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 202, 0 |
| Conread position: | 417-784 |
| Cow position: | |
| Alignm length: | 372 |
| Alignm identity: | 245 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 183, 92 |
| Conread position: | 530-868 |
| Cow position: | |
| Alignm length: | 352 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 45 |
| Conread position: | 534-1018 |
| Cow position: | |
| Alignm length: | 526 |
| Alignm identity: | 350 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 102, 17 |
| Conread position: | 534-1021 |
| Cow position: | |
| Alignm length: | 496 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 44 |
| Conread position: | 551-770 |
| Cow position: | |
| Alignm length: | 227 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 38, 24 |
| Conread position: | 554-868 |
| Cow position: | |
| Alignm length: | 321 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 21 |
| Conread position: | 558-1018 |
| Cow position: | |
| Alignm length: | 483 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 17 |
| Conread position: | 575-849 |
| Cow position: | |
| Alignm length: | 281 |
| Alignm identity: | 191 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 29, 76 |
| Conread position: | 578-740 |
| Cow position: | |
| Alignm length: | 166 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 28, 153 |
| Conread position: | 646-846 |
| Cow position: | |
| Alignm length: | 201 |
| Alignm identity: | 157 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 662-841 |
| Cow position: | |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 25, 98 |
| Conread position: | 709-842 |
| Cow position: | |
| Alignm length: | 134 |
| Alignm identity: | 102 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 735-850 |
| Cow position: | |
| Alignm length: | 116 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 24, 0 |
Show alignments to all cow chromosomes.