Cow genome map

Conread name: Ss1.1-Thy1-THY010003G05.5

Conread position: 363-850
Cow position:
Alignm length: 494
Alignm identity: 307
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 12, 129

Conread position: 370-848
Cow position:
Alignm length: 486
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 44

Conread position: 371-852
Cow position:
Alignm length: 485
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 307

Conread position: 372-538
Cow position:
Alignm length: 167
Alignm identity: 120
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 10, 0

Conread position: 372-649
Cow position:
Alignm length: 280
Alignm identity: 196
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 145, 11

Conread position: 372-963
Cow position:
Alignm length: 600
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 8

Conread position: 373-603
Cow position:
Alignm length: 237
Alignm identity: 165
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 39, 0

Conread position: 373-632
Cow position:
Alignm length: 261
Alignm identity: 177
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 127, 96

Conread position: 375-523
Cow position:
Alignm length: 149
Alignm identity: 113
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 9, 0

Conread position: 375-632
Cow position:
Alignm length: 261
Alignm identity: 182
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 136, 123

Conread position: 375-652
Cow position:
Alignm length: 281
Alignm identity: 189
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 136, 224

Conread position: 375-850
Cow position:
Alignm length: 480
Alignm identity: 303
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 212, 280

Conread position: 382-509
Cow position:
Alignm length: 128
Alignm identity: 104
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 112, 0

Conread position: 382-538
Cow position:
Alignm length: 157
Alignm identity: 120
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 382-549
Cow position:
Alignm length: 170
Alignm identity: 121
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 102, 0

Conread position: 382-560
Cow position:
Alignm length: 179
Alignm identity: 140
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 50, 0

Conread position: 382-561
Cow position:
Alignm length: 180
Alignm identity: 141
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 45, 0

Conread position: 382-625
Cow position:
Alignm length: 248
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 37

Conread position: 382-647
Cow position:
Alignm length: 267
Alignm identity: 187
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 224, 71

Conread position: 382-649
Cow position:
Alignm length: 277
Alignm identity: 183
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 97, 130

Conread position: 382-649
Cow position:
Alignm length: 278
Alignm identity: 197
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 100, 40

Conread position: 382-651
Cow position:
Alignm length: 270
Alignm identity: 189
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 18, 0

Conread position: 382-651
Cow position:
Alignm length: 270
Alignm identity: 185
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 152, 0

Conread position: 382-651
Cow position:
Alignm length: 272
Alignm identity: 194
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 120, 156

Conread position: 382-651
Cow position:
Alignm length: 274
Alignm identity: 189
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 24, 171

Conread position: 382-651
Cow position:
Alignm length: 270
Alignm identity: 190
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 79, 0

Conread position: 382-846
Cow position:
Alignm length: 469
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 378

Conread position: 382-868
Cow position:
Alignm length: 496
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 125

Conread position: 382-893
Cow position:
Alignm length: 519
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 151

Conread position: 384-521
Cow position:
Alignm length: 138
Alignm identity: 106
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 72, 0

Conread position: 384-532
Cow position:
Alignm length: 149
Alignm identity: 108
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 384-534
Cow position:
Alignm length: 151
Alignm identity: 112
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 74, 0

Conread position: 384-559
Cow position:
Alignm length: 178
Alignm identity: 127
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 116, 108

Conread position: 384-562
Cow position:
Alignm length: 186
Alignm identity: 134
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 116, 110

Conread position: 384-562
Cow position:
Alignm length: 181
Alignm identity: 129
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 116, 94

Conread position: 384-563
Cow position:
Alignm length: 183
Alignm identity: 137
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 128, 114

Conread position: 384-601
Cow position:
Alignm length: 229
Alignm identity: 163
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 128, 70

Conread position: 384-617
Cow position:
Alignm length: 241
Alignm identity: 164
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 128, 39

Conread position: 384-624
Cow position:
Alignm length: 251
Alignm identity: 173
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 116, 35

Conread position: 384-631
Cow position:
Alignm length: 259
Alignm identity: 180
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 126, 223

Conread position: 384-631
Cow position:
Alignm length: 250
Alignm identity: 171
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 139, 38

Conread position: 384-632
Cow position:
Alignm length: 256
Alignm identity: 172
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 128, 42

Conread position: 384-632
Cow position:
Alignm length: 252
Alignm identity: 172
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 133, 215

Conread position: 384-632
Cow position:
Alignm length: 253
Alignm identity: 176
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 148, 187

Conread position: 384-634
Cow position:
Alignm length: 258
Alignm identity: 175
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 127, 218

Conread position: 384-649
Cow position:
Alignm length: 266
Alignm identity: 184
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 43, 0

Conread position: 384-649
Cow position:
Alignm length: 266
Alignm identity: 177
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 55, 0

Conread position: 384-649
Cow position:
Alignm length: 266
Alignm identity: 188
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 28, 0

Conread position: 384-649
Cow position:
Alignm length: 266
Alignm identity: 172
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 168, 0

Conread position: 384-651
Cow position:
Alignm length: 271
Alignm identity: 191
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 255, 126

Conread position: 384-652
Cow position:
Alignm length: 277
Alignm identity: 185
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 105, 85

Conread position: 384-652
Cow position:
Alignm length: 276
Alignm identity: 187
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 116, 108

Conread position: 384-655
Cow position:
Alignm length: 277
Alignm identity: 187
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 34, 72

Conread position: 384-689
Cow position:
Alignm length: 312
Alignm identity: 207
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 133, 128

Conread position: 384-691
Cow position:
Alignm length: 313
Alignm identity: 203
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 133, 128

Conread position: 384-697
Cow position:
Alignm length: 318
Alignm identity: 175
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 133, 128

Conread position: 384-698
Cow position:
Alignm length: 327
Alignm identity: 219
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 132, 258

Conread position: 384-720
Cow position:
Alignm length: 343
Alignm identity: 221
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 133, 128

Conread position: 384-730
Cow position:
Alignm length: 349
Alignm identity: 207
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 216, 257

Conread position: 384-747
Cow position:
Alignm length: 367
Alignm identity: 238
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 208, 149

Conread position: 384-784
Cow position:
Alignm length: 406
Alignm identity: 245
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 133, 5

Conread position: 384-786
Cow position:
Alignm length: 406
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 376

Conread position: 384-786
Cow position:
Alignm length: 406
Alignm identity: 257
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 208, 370

Conread position: 384-786
Cow position:
Alignm length: 407
Alignm identity: 257
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 177, 181

Conread position: 384-786
Cow position:
Alignm length: 406
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 173

Conread position: 384-786
Cow position:
Alignm length: 408
Alignm identity: 260
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 189, 209

Conread position: 384-786
Cow position:
Alignm length: 403
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 0

Conread position: 384-809
Cow position:
Alignm length: 431
Alignm identity: 276
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 133, 62

Conread position: 384-842
Cow position:
Alignm length: 465
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 162

Conread position: 384-845
Cow position:
Alignm length: 466
Alignm identity: 293
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 33, 29

Conread position: 384-847
Cow position:
Alignm length: 469
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 110

Conread position: 384-847
Cow position:
Alignm length: 480
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 383

Conread position: 384-847
Cow position:
Alignm length: 468
Alignm identity: 294
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 33, 291

Conread position: 384-848
Cow position:
Alignm length: 468
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 54

Conread position: 384-850
Cow position:
Alignm length: 475
Alignm identity: 298
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 70, 131

Conread position: 384-850
Cow position:
Alignm length: 470
Alignm identity: 295
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 205, 128

Conread position: 384-850
Cow position:
Alignm length: 468
Alignm identity: 293
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 232, 374

Conread position: 384-850
Cow position:
Alignm length: 471
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 110

Conread position: 384-850
Cow position:
Alignm length: 472
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 347

Conread position: 384-850
Cow position:
Alignm length: 474
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 69

Conread position: 384-850
Cow position:
Alignm length: 473
Alignm identity: 299
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 77, 24

Conread position: 384-850
Cow position:
Alignm length: 475
Alignm identity: 300
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 77, 24

Conread position: 384-850
Cow position:
Alignm length: 472
Alignm identity: 294
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 133, 128

Conread position: 384-850
Cow position:
Alignm length: 470
Alignm identity: 296
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 205, 38

Conread position: 384-850
Cow position:
Alignm length: 471
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 70

Conread position: 384-850
Cow position:
Alignm length: 471
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 207

Conread position: 384-850
Cow position:
Alignm length: 471
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 207

Conread position: 384-850
Cow position:
Alignm length: 471
Alignm identity: 294
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 189, 153

Conread position: 384-850
Cow position:
Alignm length: 472
Alignm identity: 295
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 189, 209

Conread position: 384-850
Cow position:
Alignm length: 468
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 106

Conread position: 384-850
Cow position:
Alignm length: 472
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 208

Conread position: 384-850
Cow position:
Alignm length: 471
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 64

Conread position: 384-850
Cow position:
Alignm length: 468
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 374

Conread position: 384-850
Cow position:
Alignm length: 471
Alignm identity: 303
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 177, 138

Conread position: 384-850
Cow position:
Alignm length: 470
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 376

Conread position: 384-850
Cow position:
Alignm length: 470
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 376

Conread position: 384-850
Cow position:
Alignm length: 471
Alignm identity: 288
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 215, 64

Conread position: 384-850
Cow position:
Alignm length: 472
Alignm identity: 297
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 217, 68

Conread position: 384-850
Cow position:
Alignm length: 471
Alignm identity: 297
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 187, 377

Conread position: 384-850
Cow position:
Alignm length: 470
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 376

Conread position: 384-850
Cow position:
Alignm length: 474
Alignm identity: 299
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 133, 64

Conread position: 384-850
Cow position:
Alignm length: 471
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 68

Conread position: 384-850
Cow position:
Alignm length: 472
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 378

Conread position: 384-850
Cow position:
Alignm length: 469
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 375

Conread position: 384-850
Cow position:
Alignm length: 472
Alignm identity: 298
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 133, 128

Conread position: 384-850
Cow position:
Alignm length: 474
Alignm identity: 300
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 90, 70

Conread position: 384-850
Cow position:
Alignm length: 470
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 123

Conread position: 384-858
Cow position:
Alignm length: 480
Alignm identity: 281
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 116, 106

Conread position: 384-861
Cow position:
Alignm length: 485
Alignm identity: 324
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 124, 296

Conread position: 385-651
Cow position:
Alignm length: 268
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 180

Conread position: 385-787
Cow position:
Alignm length: 416
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 388

Conread position: 385-809
Cow position:
Alignm length: 429
Alignm identity: 274
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 88, 79

Conread position: 385-850
Cow position:
Alignm length: 470
Alignm identity: 287
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 188, 299

Conread position: 385-850
Cow position:
Alignm length: 469
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 373

Conread position: 385-850
Cow position:
Alignm length: 469
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 375

Conread position: 386-764
Cow position:
Alignm length: 382
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 96

Conread position: 386-809
Cow position:
Alignm length: 428
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 375

Conread position: 386-846
Cow position:
Alignm length: 464
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 374

Conread position: 386-850
Cow position:
Alignm length: 469
Alignm identity: 296
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 131, 126

Conread position: 386-850
Cow position:
Alignm length: 469
Alignm identity: 296
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 131, 126

Conread position: 386-850
Cow position:
Alignm length: 468
Alignm identity: 296
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 203, 126

Conread position: 389-583
Cow position:
Alignm length: 198
Alignm identity: 143
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 127, 0

Conread position: 389-599
Cow position:
Alignm length: 215
Alignm identity: 152
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 123, 0

Conread position: 389-632
Cow position:
Alignm length: 249
Alignm identity: 171
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 127, 182

Conread position: 389-634
Cow position:
Alignm length: 253
Alignm identity: 169
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 122, 58

Conread position: 389-767
Cow position:
Alignm length: 383
Alignm identity: 253
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 72, 306

Conread position: 389-850
Cow position:
Alignm length: 467
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 89

Conread position: 393-565
Cow position:
Alignm length: 173
Alignm identity: 127
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 121, 0

Conread position: 393-634
Cow position:
Alignm length: 252
Alignm identity: 176
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 90, 187

Conread position: 395-735
Cow position:
Alignm length: 344
Alignm identity: 238
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 200, 91

Conread position: 399-850
Cow position:
Alignm length: 456
Alignm identity: 286
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 202, 14

Conread position: 415-649
Cow position:
Alignm length: 236
Alignm identity: 164
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 191, 46

Conread position: 430-847
Cow position:
Alignm length: 423
Alignm identity: 264
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 171, 326

Conread position: 437-648
Cow position:
Alignm length: 213
Alignm identity: 151
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 167, 108

Conread position: 442-1018
Cow position:
Alignm length: 595
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 191

Conread position: 461-1020
Cow position:
Alignm length: 585
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 256

Conread position: 466-852
Cow position:
Alignm length: 392
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 99

Conread position: 472-623
Cow position:
Alignm length: 156
Alignm identity: 119
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 132, 0

Conread position: 474-713
Cow position:
Alignm length: 240
Alignm identity: 160
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 178, 0

Conread position: 518-850
Cow position:
Alignm length: 336
Alignm identity: 211
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 78, 196

Conread position: 527-734
Cow position:
Alignm length: 216
Alignm identity: 150
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 73, 48

Conread position: 530-1020
Cow position:
Alignm length: 506
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 89

Conread position: 548-953
Cow position:
Alignm length: 417
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 20

Conread position: 554-868
Cow position:
Alignm length: 317
Alignm identity: 217
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 300, 21

Conread position: 569-764
Cow position:
Alignm length: 200
Alignm identity: 143
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 37, 6

Conread position: 640-1019
Cow position:
Alignm length: 397
Alignm identity: 257
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 75, 43

Conread position: 673-1017
Cow position:
Alignm length: 362
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 87

Show alignments to all cow chromosomes.