Cow genome map
| Conread name: | Ss1.1-Thy1-THY010003G05.5 |
| Conread position: | 363-850 |
| Cow position: | chrX:12280969-12281457 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 307 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 12, 129 |
| Conread position: | 370-848 |
| Cow position: | chrX:25041126-25041600 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 44 |
| Conread position: | 371-852 |
| Cow position: | chrX:28651794-28652267 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 229, 307 |
| Conread position: | 372-538 |
| Cow position: | chrX:19185632-19185796 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 372-649 |
| Cow position: | chrX:6910425-6910701 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 145, 11 |
| Conread position: | 372-963 |
| Cow position: | chrX:28553323-28552739 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 234, 8 |
| Conread position: | 373-603 |
| Cow position: | chrX:12672263-12672499 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 373-632 |
| Cow position: | chrX:30710663-30710407 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 127, 96 |
| Conread position: | 375-523 |
| Cow position: | chrX:28549203-28549056 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 375-632 |
| Cow position: | chrX:23276424-23276167 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 182 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 136, 123 |
| Conread position: | 375-652 |
| Cow position: | chrX:23392295-23392573 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 189 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 136, 224 |
| Conread position: | 375-850 |
| Cow position: | chrX:20360659-20361135 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 303 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 212, 280 |
| Conread position: | 382-509 |
| Cow position: | chrX:40057752-40057878 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 382-538 |
| Cow position: | chrX:22131401-22131557 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 382-549 |
| Cow position: | chrX:22777641-22777472 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 382-560 |
| Cow position: | chrX:30144201-30144378 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 382-561 |
| Cow position: | chrX:16236614-16236441 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 382-625 |
| Cow position: | chrX:29284028-29283783 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 37 |
| Conread position: | 382-647 |
| Cow position: | chrX:21602196-21601935 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 224, 71 |
| Conread position: | 382-649 |
| Cow position: | chrX:24137076-24137348 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 183 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 97, 130 |
| Conread position: | 382-649 |
| Cow position: | chrX:27984993-27985266 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 100, 40 |
| Conread position: | 382-651 |
| Cow position: | chrX:21633261-21633525 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 382-651 |
| Cow position: | chrX:28604770-28605034 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 152, 0 |
| Conread position: | 382-651 |
| Cow position: | chrX:30990641-30990898 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 194 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 120, 156 |
| Conread position: | 382-651 |
| Cow position: | chrX:35017139-35016870 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 24, 171 |
| Conread position: | 382-651 |
| Cow position: | chrX:39717125-39716864 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 382-846 |
| Cow position: | chrX:21586316-21585849 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 378 |
| Conread position: | 382-868 |
| Cow position: | chrX:29794810-29795297 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 125 |
| Conread position: | 382-893 |
| Cow position: | chrX:31372253-31371748 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 151 |
| Conread position: | 384-521 |
| Cow position: | chrX:17669110-17669244 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 106 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 384-532 |
| Cow position: | chrX:16274957-16274809 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 384-534 |
| Cow position: | chrX:26759295-26759444 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 384-559 |
| Cow position: | chrX:25186956-25186780 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 116, 108 |
| Conread position: | 384-562 |
| Cow position: | chrX:21222243-21222060 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 116, 110 |
| Conread position: | 384-562 |
| Cow position: | chrX:30186153-30186332 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 116, 94 |
| Conread position: | 384-563 |
| Cow position: | chrX:32095655-32095834 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 128, 114 |
| Conread position: | 384-601 |
| Cow position: | chrX:15598225-15597998 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 128, 70 |
| Conread position: | 384-617 |
| Cow position: | chrX:21828831-21828594 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 128, 39 |
| Conread position: | 384-624 |
| Cow position: | chrX:26527271-26527025 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 116, 35 |
| Conread position: | 384-631 |
| Cow position: | chrX:1546230-1545974 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 126, 223 |
| Conread position: | 384-631 |
| Cow position: | chrX:38145356-38145110 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 139, 38 |
| Conread position: | 384-632 |
| Cow position: | chrX:970070-969821 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 128, 42 |
| Conread position: | 384-632 |
| Cow position: | chrX:13413826-13414075 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 133, 215 |
| Conread position: | 384-632 |
| Cow position: | chrX:22487490-22487241 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 176 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 148, 187 |
| Conread position: | 384-634 |
| Cow position: | chrX:29854268-29854523 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 127, 218 |
| Conread position: | 384-649 |
| Cow position: | chrX:13007324-13007577 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 384-649 |
| Cow position: | chrX:24274989-24274731 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 384-649 |
| Cow position: | chrX:26504483-26504225 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 384-649 |
| Cow position: | chrX:30046810-30047071 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 172 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 168, 0 |
| Conread position: | 384-651 |
| Cow position: | chrX:21290180-21290441 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 255, 126 |
| Conread position: | 384-652 |
| Cow position: | chrX:31197929-31197657 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 105, 85 |
| Conread position: | 384-652 |
| Cow position: | chrX:41151523-41151252 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 116, 108 |
| Conread position: | 384-655 |
| Cow position: | chrX:12182468-12182205 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 34, 72 |
| Conread position: | 384-689 |
| Cow position: | chrX:39521169-39520860 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 133, 128 |
| Conread position: | 384-691 |
| Cow position: | chrX:8453732-8453421 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 203 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 133, 128 |
| Conread position: | 384-697 |
| Cow position: | chrX:8669856-8669543 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 133, 128 |
| Conread position: | 384-698 |
| Cow position: | chrX:9901315-9901640 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 219 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 132, 258 |
| Conread position: | 384-720 |
| Cow position: | chrX:5284463-5284803 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 221 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 133, 128 |
| Conread position: | 384-730 |
| Cow position: | chrX:24485149-24485496 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 207 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 216, 257 |
| Conread position: | 384-747 |
| Cow position: | chrX:8478976-8478612 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 238 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 208, 149 |
| Conread position: | 384-784 |
| Cow position: | chrX:5337317-5337718 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 245 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 133, 5 |
| Conread position: | 384-786 |
| Cow position: | chrX:1833138-1832734 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 376 |
| Conread position: | 384-786 |
| Cow position: | chrX:12341458-12341054 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 257 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 208, 370 |
| Conread position: | 384-786 |
| Cow position: | chrX:12804589-12804993 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 257 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 177, 181 |
| Conread position: | 384-786 |
| Cow position: | chrX:14787591-14787994 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 173 |
| Conread position: | 384-786 |
| Cow position: | chrX:30668206-30668611 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 260 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 189, 209 |
| Conread position: | 384-786 |
| Cow position: | chrX:37848272-37847880 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 0 |
| Conread position: | 384-809 |
| Cow position: | chrX:21305251-21305674 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 276 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 133, 62 |
| Conread position: | 384-842 |
| Cow position: | chrX:31034991-31034538 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 212, 162 |
| Conread position: | 384-845 |
| Cow position: | chrX:28506675-28507137 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 293 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 33, 29 |
| Conread position: | 384-847 |
| Cow position: | chrX:7092869-7092412 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 110 |
| Conread position: | 384-847 |
| Cow position: | chrX:21489501-21489025 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 383 |
| Conread position: | 384-847 |
| Cow position: | chrX:30174579-30175043 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 294 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 33, 291 |
| Conread position: | 384-848 |
| Cow position: | chrX:22583659-22584124 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 54 |
| Conread position: | 384-850 |
| Cow position: | chrX:978884-978413 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 298 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 70, 131 |
| Conread position: | 384-850 |
| Cow position: | chrX:2860533-2860999 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 295 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 205, 128 |
| Conread position: | 384-850 |
| Cow position: | chrX:3085636-3086101 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 293 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 232, 374 |
| Conread position: | 384-850 |
| Cow position: | chrX:5862660-5862193 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 110 |
| Conread position: | 384-850 |
| Cow position: | chrX:6576960-6576493 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 347 |
| Conread position: | 384-850 |
| Cow position: | chrX:8586359-8585891 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 69 |
| Conread position: | 384-850 |
| Cow position: | chrX:9007609-9007142 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 299 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 77, 24 |
| Conread position: | 384-850 |
| Cow position: | chrX:9124647-9124182 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 300 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 77, 24 |
| Conread position: | 384-850 |
| Cow position: | chrX:12655484-12655952 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 294 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 133, 128 |
| Conread position: | 384-850 |
| Cow position: | chrX:12704650-12705111 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 296 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 205, 38 |
| Conread position: | 384-850 |
| Cow position: | chrX:13032165-13032628 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 70 |
| Conread position: | 384-850 |
| Cow position: | chrX:13077427-13077894 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 215, 207 |
| Conread position: | 384-850 |
| Cow position: | chrX:13098001-13098468 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 215, 207 |
| Conread position: | 384-850 |
| Cow position: | chrX:13398851-13399317 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 294 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 189, 153 |
| Conread position: | 384-850 |
| Cow position: | chrX:14051344-14050876 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 295 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 189, 209 |
| Conread position: | 384-850 |
| Cow position: | chrX:15180173-15180637 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 106 |
| Conread position: | 384-850 |
| Cow position: | chrX:16363860-16364328 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 208 |
| Conread position: | 384-850 |
| Cow position: | chrX:16565135-16564670 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 207, 64 |
| Conread position: | 384-850 |
| Cow position: | chrX:17479260-17479725 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 374 |
| Conread position: | 384-850 |
| Cow position: | chrX:18218664-18218201 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 303 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 177, 138 |
| Conread position: | 384-850 |
| Cow position: | chrX:21339665-21339198 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 376 |
| Conread position: | 384-850 |
| Cow position: | chrX:22526340-22526807 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 376 |
| Conread position: | 384-850 |
| Cow position: | chrX:22610574-22610109 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 288 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 215, 64 |
| Conread position: | 384-850 |
| Cow position: | chrX:22620047-22620507 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 297 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 217, 68 |
| Conread position: | 384-850 |
| Cow position: | chrX:24325881-24326349 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 297 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 187, 377 |
| Conread position: | 384-850 |
| Cow position: | chrX:27427055-27427522 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 376 |
| Conread position: | 384-850 |
| Cow position: | chrX:27972946-27973413 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 299 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 133, 64 |
| Conread position: | 384-850 |
| Cow position: | chrX:28635286-28635740 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 211, 68 |
| Conread position: | 384-850 |
| Cow position: | chrX:28759357-28759826 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 378 |
| Conread position: | 384-850 |
| Cow position: | chrX:29174334-29174800 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 375 |
| Conread position: | 384-850 |
| Cow position: | chrX:29934697-29934229 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 298 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 133, 128 |
| Conread position: | 384-850 |
| Cow position: | chrX:30010220-30009752 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 300 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 90, 70 |
| Conread position: | 384-850 |
| Cow position: | chrX:30190117-30190578 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 213, 123 |
| Conread position: | 384-858 |
| Cow position: | chrX:2101130-2100655 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 281 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 116, 106 |
| Conread position: | 384-861 |
| Cow position: | chrX:26767901-26768362 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 324 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 124, 296 |
| Conread position: | 385-651 |
| Cow position: | chrX:25332390-25332127 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 180 |
| Conread position: | 385-787 |
| Cow position: | chrX:24088666-24088252 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 388 |
| Conread position: | 385-809 |
| Cow position: | chrX:31187972-31188391 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 274 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 88, 79 |
| Conread position: | 385-850 |
| Cow position: | chrX:3376957-3377420 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 287 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 188, 299 |
| Conread position: | 385-850 |
| Cow position: | chrX:3422178-3422644 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 373 |
| Conread position: | 385-850 |
| Cow position: | chrX:8963790-8964256 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 375 |
| Conread position: | 386-764 |
| Cow position: | chrX:16017841-16018209 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 214, 96 |
| Conread position: | 386-809 |
| Cow position: | chrX:37811659-37811233 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 375 |
| Conread position: | 386-846 |
| Cow position: | chrX:5395702-5396163 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 374 |
| Conread position: | 386-850 |
| Cow position: | chrX:9173103-9173561 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 296 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 131, 126 |
| Conread position: | 386-850 |
| Cow position: | chrX:9193381-9193839 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 296 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 131, 126 |
| Conread position: | 386-850 |
| Cow position: | chrX:26401206-26401670 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 296 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 203, 126 |
| Conread position: | 389-583 |
| Cow position: | chrX:318379-318182 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 389-599 |
| Cow position: | chrX:2483344-2483558 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 389-632 |
| Cow position: | chrX:29092525-29092283 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 127, 182 |
| Conread position: | 389-634 |
| Cow position: | chrX:15127951-15128199 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 169 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 122, 58 |
| Conread position: | 389-767 |
| Cow position: | chrX:27990730-27991109 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 253 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 72, 306 |
| Conread position: | 389-850 |
| Cow position: | chrX:2603310-2602848 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 89 |
| Conread position: | 393-565 |
| Cow position: | chrX:23042316-23042483 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 393-634 |
| Cow position: | chrX:32466537-32466289 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 90, 187 |
| Conread position: | 395-735 |
| Cow position: | chrX:27493715-27493379 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 238 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 200, 91 |
| Conread position: | 399-850 |
| Cow position: | chrX:20316832-20317281 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 286 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 202, 14 |
| Conread position: | 415-649 |
| Cow position: | chrX:6276112-6276332 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 191, 46 |
| Conread position: | 430-847 |
| Cow position: | chrX:28522467-28522885 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 264 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 171, 326 |
| Conread position: | 437-648 |
| Cow position: | chrX:5835194-5835396 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 167, 108 |
| Conread position: | 442-1018 |
| Cow position: | chrX:2537179-2537760 (view UCSC Genome Browser custom track) |
| Alignm length: | 595 |
| Alignm identity: | 438 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 191 |
| Conread position: | 461-1020 |
| Cow position: | chrX:21791928-21791351 (view UCSC Genome Browser custom track) |
| Alignm length: | 585 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 256 |
| Conread position: | 466-852 |
| Cow position: | chrX:35016088-35015704 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 99 |
| Conread position: | 472-623 |
| Cow position: | chrX:22813631-22813476 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 474-713 |
| Cow position: | chrX:11669250-11669478 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 178, 0 |
| Conread position: | 518-850 |
| Cow position: | chrX:14593947-14593615 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 78, 196 |
| Conread position: | 527-734 |
| Cow position: | chrX:15601779-15601991 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 73, 48 |
| Conread position: | 530-1020 |
| Cow position: | chrX:6284048-6284544 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 89 |
| Conread position: | 548-953 |
| Cow position: | chrX:6361636-6362043 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 20 |
| Conread position: | 554-868 |
| Cow position: | chrX:28548446-28548143 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 217 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 300, 21 |
| Conread position: | 569-764 |
| Cow position: | chrX:17669848-17670042 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 37, 6 |
| Conread position: | 640-1019 |
| Cow position: | chrX:30144403-30144790 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 257 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 75, 43 |
| Conread position: | 673-1017 |
| Cow position: | chrX:42450445-42450799 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 87 |
Show alignments to all cow chromosomes.