Cow genome map

Conread name: Ss1.1-Thy1-THY010008D08.5

Conread position: 5-362
Cow position:
Alignm length: 379
Alignm identity: 262
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 25, 16

Conread position: 30-358
Cow position:
Alignm length: 341
Alignm identity: 217
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 37, 0

Conread position: 30-358
Cow position:
Alignm length: 341
Alignm identity: 223
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 53, 37

Conread position: 30-363
Cow position:
Alignm length: 347
Alignm identity: 241
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 42, 84

Conread position: 30-367
Cow position:
Alignm length: 352
Alignm identity: 242
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 53, 23

Conread position: 84-352
Cow position:
Alignm length: 281
Alignm identity: 190
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 111, 197

Conread position: 90-355
Cow position:
Alignm length: 279
Alignm identity: 188
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 9, 0

Conread position: 91-362
Cow position:
Alignm length: 280
Alignm identity: 194
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 99, 0

Conread position: 91-363
Cow position:
Alignm length: 280
Alignm identity: 202
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 102, 116

Conread position: 92-312
Cow position:
Alignm length: 229
Alignm identity: 157
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 111, 23

Conread position: 93-372
Cow position:
Alignm length: 286
Alignm identity: 196
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 68, 50

Conread position: 136-364
Cow position:
Alignm length: 238
Alignm identity: 168
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 29, 39

Conread position: 186-854
Cow position:
Alignm length: 706
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 14

Conread position: 212-364
Cow position:
Alignm length: 156
Alignm identity: 116
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 69, 0

Conread position: 440-741
Cow position:
Alignm length: 307
Alignm identity: 213
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 133, 14

Conread position: 440-741
Cow position:
Alignm length: 306
Alignm identity: 206
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 133, 14

Conread position: 440-741
Cow position:
Alignm length: 306
Alignm identity: 210
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 133, 14

Conread position: 440-741
Cow position:
Alignm length: 310
Alignm identity: 208
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 85, 14

Conread position: 440-741
Cow position:
Alignm length: 306
Alignm identity: 206
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 133, 15

Conread position: 440-741
Cow position:
Alignm length: 306
Alignm identity: 210
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 133, 14

Conread position: 440-741
Cow position:
Alignm length: 307
Alignm identity: 211
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 133, 14

Conread position: 440-741
Cow position:
Alignm length: 306
Alignm identity: 211
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 133, 14

Conread position: 466-745
Cow position:
Alignm length: 287
Alignm identity: 188
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 21, 8

Conread position: 466-846
Cow position:
Alignm length: 402
Alignm identity: 269
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 106, 63

Conread position: 467-740
Cow position:
Alignm length: 278
Alignm identity: 180
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 108, 37

Conread position: 467-741
Cow position:
Alignm length: 280
Alignm identity: 184
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 106, 183

Conread position: 467-741
Cow position:
Alignm length: 279
Alignm identity: 190
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 106, 0

Conread position: 467-744
Cow position:
Alignm length: 287
Alignm identity: 193
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 105, 215

Conread position: 467-744
Cow position:
Alignm length: 282
Alignm identity: 194
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 107, 0

Conread position: 467-744
Cow position:
Alignm length: 283
Alignm identity: 188
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 9, 25

Conread position: 467-744
Cow position:
Alignm length: 283
Alignm identity: 193
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 107, 32

Conread position: 467-746
Cow position:
Alignm length: 283
Alignm identity: 186
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 92, 12

Conread position: 467-746
Cow position:
Alignm length: 285
Alignm identity: 187
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 22, 45

Conread position: 467-750
Cow position:
Alignm length: 291
Alignm identity: 187
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 106, 0

Conread position: 468-651
Cow position:
Alignm length: 185
Alignm identity: 132
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 105, 18

Conread position: 468-699
Cow position:
Alignm length: 236
Alignm identity: 161
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 105, 18

Conread position: 468-738
Cow position:
Alignm length: 276
Alignm identity: 183
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 105, 20

Conread position: 468-741
Cow position:
Alignm length: 277
Alignm identity: 185
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 187, 18

Conread position: 468-741
Cow position:
Alignm length: 278
Alignm identity: 192
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 105, 18

Conread position: 468-741
Cow position:
Alignm length: 280
Alignm identity: 196
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 105, 18

Conread position: 468-741
Cow position:
Alignm length: 278
Alignm identity: 190
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 105, 18

Conread position: 468-741
Cow position:
Alignm length: 278
Alignm identity: 192
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 105, 18

Conread position: 468-741
Cow position:
Alignm length: 278
Alignm identity: 190
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 105, 18

Conread position: 468-741
Cow position:
Alignm length: 280
Alignm identity: 194
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 121, 18

Conread position: 468-741
Cow position:
Alignm length: 278
Alignm identity: 192
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 105, 18

Conread position: 468-741
Cow position:
Alignm length: 278
Alignm identity: 196
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 105, 18

Conread position: 468-741
Cow position:
Alignm length: 278
Alignm identity: 187
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 105, 18

Conread position: 468-741
Cow position:
Alignm length: 275
Alignm identity: 192
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 105, 18

Conread position: 468-743
Cow position:
Alignm length: 280
Alignm identity: 190
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 105, 18

Conread position: 468-744
Cow position:
Alignm length: 283
Alignm identity: 194
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 105, 29

Conread position: 468-745
Cow position:
Alignm length: 287
Alignm identity: 194
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 7, 62

Conread position: 468-745
Cow position:
Alignm length: 283
Alignm identity: 186
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 10, 37

Conread position: 468-745
Cow position:
Alignm length: 283
Alignm identity: 187
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 48, 11

Conread position: 468-746
Cow position:
Alignm length: 284
Alignm identity: 196
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 105, 18

Conread position: 468-748
Cow position:
Alignm length: 286
Alignm identity: 190
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 107, 0

Conread position: 468-750
Cow position:
Alignm length: 291
Alignm identity: 186
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 105, 0

Conread position: 468-783
Cow position:
Alignm length: 325
Alignm identity: 208
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 105, 112

Conread position: 468-841
Cow position:
Alignm length: 381
Alignm identity: 241
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 105, 24

Conread position: 469-745
Cow position:
Alignm length: 282
Alignm identity: 178
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 469-750
Cow position:
Alignm length: 288
Alignm identity: 186
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 61, 97

Conread position: 470-745
Cow position:
Alignm length: 281
Alignm identity: 201
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 25, 13

Conread position: 471-744
Cow position:
Alignm length: 276
Alignm identity: 197
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 144, 103

Conread position: 471-745
Cow position:
Alignm length: 280
Alignm identity: 181
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 98, 172

Conread position: 471-829
Cow position:
Alignm length: 368
Alignm identity: 245
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 101, 58

Conread position: 472-744
Cow position:
Alignm length: 280
Alignm identity: 190
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 6, 81

Conread position: 472-745
Cow position:
Alignm length: 278
Alignm identity: 186
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 99, 11

Conread position: 472-746
Cow position:
Alignm length: 278
Alignm identity: 192
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 17, 150

Conread position: 472-750
Cow position:
Alignm length: 287
Alignm identity: 191
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 8, 102

Conread position: 473-744
Cow position:
Alignm length: 276
Alignm identity: 191
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 7, 19

Conread position: 473-744
Cow position:
Alignm length: 277
Alignm identity: 184
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 100, 228

Conread position: 473-751
Cow position:
Alignm length: 285
Alignm identity: 191
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 100, 0

Conread position: 474-637
Cow position:
Alignm length: 165
Alignm identity: 117
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 97, 0

Conread position: 474-654
Cow position:
Alignm length: 182
Alignm identity: 129
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 99, 0

Conread position: 474-689
Cow position:
Alignm length: 219
Alignm identity: 152
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 192, 99

Conread position: 474-718
Cow position:
Alignm length: 252
Alignm identity: 166
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 99, 92

Conread position: 474-718
Cow position:
Alignm length: 252
Alignm identity: 167
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 97, 160

Conread position: 474-741
Cow position:
Alignm length: 272
Alignm identity: 182
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 99, 81

Conread position: 474-741
Cow position:
Alignm length: 272
Alignm identity: 186
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 99, 0

Conread position: 474-741
Cow position:
Alignm length: 272
Alignm identity: 181
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 99, 0

Conread position: 474-741
Cow position:
Alignm length: 272
Alignm identity: 184
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 99, 0

Conread position: 474-741
Cow position:
Alignm length: 272
Alignm identity: 180
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 99, 17

Conread position: 474-741
Cow position:
Alignm length: 276
Alignm identity: 187
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 101, 121

Conread position: 474-741
Cow position:
Alignm length: 274
Alignm identity: 184
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 32, 0

Conread position: 474-741
Cow position:
Alignm length: 272
Alignm identity: 184
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 99, 0

Conread position: 474-741
Cow position:
Alignm length: 272
Alignm identity: 188
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 99, 0

Conread position: 474-741
Cow position:
Alignm length: 272
Alignm identity: 182
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 99, 60

Conread position: 474-744
Cow position:
Alignm length: 275
Alignm identity: 184
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 99, 55

Conread position: 474-744
Cow position:
Alignm length: 275
Alignm identity: 183
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 99, 65

Conread position: 474-744
Cow position:
Alignm length: 275
Alignm identity: 184
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 99, 0

Conread position: 474-744
Cow position:
Alignm length: 275
Alignm identity: 184
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 99, 55

Conread position: 474-745
Cow position:
Alignm length: 277
Alignm identity: 179
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 99, 244

Conread position: 474-745
Cow position:
Alignm length: 276
Alignm identity: 185
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 99, 39

Conread position: 474-746
Cow position:
Alignm length: 277
Alignm identity: 182
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 99, 0

Conread position: 474-750
Cow position:
Alignm length: 283
Alignm identity: 187
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 99, 60

Conread position: 474-750
Cow position:
Alignm length: 284
Alignm identity: 188
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 64, 28

Conread position: 474-750
Cow position:
Alignm length: 283
Alignm identity: 192
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 99, 34

Conread position: 474-750
Cow position:
Alignm length: 283
Alignm identity: 192
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 15, 103

Conread position: 474-854
Cow position:
Alignm length: 387
Alignm identity: 249
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 101, 77

Conread position: 475-689
Cow position:
Alignm length: 219
Alignm identity: 151
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 98, 0

Conread position: 475-738
Cow position:
Alignm length: 272
Alignm identity: 181
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 17, 64

Conread position: 475-744
Cow position:
Alignm length: 274
Alignm identity: 188
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 98, 35

Conread position: 475-750
Cow position:
Alignm length: 282
Alignm identity: 192
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 98, 29

Conread position: 476-723
Cow position:
Alignm length: 252
Alignm identity: 170
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 97, 0

Conread position: 476-744
Cow position:
Alignm length: 276
Alignm identity: 191
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 97, 0

Conread position: 479-738
Cow position:
Alignm length: 264
Alignm identity: 171
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 94, 11

Conread position: 479-744
Cow position:
Alignm length: 270
Alignm identity: 182
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 94, 136

Conread position: 480-741
Cow position:
Alignm length: 266
Alignm identity: 188
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 94, 72

Conread position: 481-745
Cow position:
Alignm length: 268
Alignm identity: 176
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 15, 120

Conread position: 484-744
Cow position:
Alignm length: 266
Alignm identity: 176
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 15, 0

Conread position: 484-750
Cow position:
Alignm length: 276
Alignm identity: 184
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 15, 0

Conread position: 487-742
Cow position:
Alignm length: 260
Alignm identity: 170
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 86, 103

Conread position: 488-830
Cow position:
Alignm length: 355
Alignm identity: 231
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 85, 102

Conread position: 491-741
Cow position:
Alignm length: 255
Alignm identity: 177
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 82, 0

Conread position: 491-750
Cow position:
Alignm length: 270
Alignm identity: 182
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 81, 43

Conread position: 491-750
Cow position:
Alignm length: 263
Alignm identity: 173
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 83, 168

Conread position: 493-689
Cow position:
Alignm length: 201
Alignm identity: 142
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 80, 0

Conread position: 493-695
Cow position:
Alignm length: 208
Alignm identity: 144
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 80, 0

Conread position: 493-712
Cow position:
Alignm length: 221
Alignm identity: 150
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 80, 138

Conread position: 493-741
Cow position:
Alignm length: 252
Alignm identity: 169
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 80, 0

Conread position: 493-744
Cow position:
Alignm length: 256
Alignm identity: 177
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 80, 0

Conread position: 493-745
Cow position:
Alignm length: 254
Alignm identity: 174
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 80, 116

Conread position: 493-745
Cow position:
Alignm length: 260
Alignm identity: 170
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 78, 202

Conread position: 493-750
Cow position:
Alignm length: 263
Alignm identity: 174
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 80, 104

Conread position: 494-723
Cow position:
Alignm length: 234
Alignm identity: 161
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 79, 29

Conread position: 494-746
Cow position:
Alignm length: 260
Alignm identity: 173
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 81, 150

Conread position: 495-729
Cow position:
Alignm length: 239
Alignm identity: 170
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 81, 72

Conread position: 497-741
Cow position:
Alignm length: 249
Alignm identity: 167
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 76, 38

Conread position: 499-741
Cow position:
Alignm length: 247
Alignm identity: 170
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 74, 0

Conread position: 500-850
Cow position:
Alignm length: 359
Alignm identity: 229
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 73, 34

Conread position: 503-750
Cow position:
Alignm length: 252
Alignm identity: 165
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 12, 158

Conread position: 504-750
Cow position:
Alignm length: 250
Alignm identity: 167
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 70, 140

Conread position: 504-752
Cow position:
Alignm length: 254
Alignm identity: 170
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 69, 86

Conread position: 505-741
Cow position:
Alignm length: 241
Alignm identity: 157
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 68, 0

Conread position: 506-741
Cow position:
Alignm length: 240
Alignm identity: 159
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 67, 0

Conread position: 518-746
Cow position:
Alignm length: 234
Alignm identity: 158
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 57, 199

Conread position: 523-825
Cow position:
Alignm length: 320
Alignm identity: 216
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 51, 7

Conread position: 529-745
Cow position:
Alignm length: 218
Alignm identity: 148
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 45, 97

Conread position: 641-850
Cow position:
Alignm length: 225
Alignm identity: 157
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 25, 0

Show alignments to all cow chromosomes.