Cow genome map
| Conread name: | Ss1.1-Thy1-THY010008D08.5 |
| Conread position: | 5-362 |
| Cow position: | chr25:25731433-25731808 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 262 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 25, 16 |
| Conread position: | 30-358 |
| Cow position: | chr25:14011767-14012107 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 217 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 30-358 |
| Cow position: | chr25:28981318-28981652 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 223 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 53, 37 |
| Conread position: | 30-363 |
| Cow position: | chr25:24137576-24137244 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 241 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 42, 84 |
| Conread position: | 30-367 |
| Cow position: | chr25:13241531-13241873 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 242 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 53, 23 |
| Conread position: | 84-352 |
| Cow position: | chr25:37231623-37231352 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 111, 197 |
| Conread position: | 90-355 |
| Cow position: | chr25:33459609-33459331 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 91-362 |
| Cow position: | chr25:27977836-27977557 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 194 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 91-363 |
| Cow position: | chr25:20369093-20369370 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 202 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 102, 116 |
| Conread position: | 92-312 |
| Cow position: | chr25:33264477-33264700 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 111, 23 |
| Conread position: | 93-372 |
| Cow position: | chr25:1025452-1025175 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 196 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 68, 50 |
| Conread position: | 136-364 |
| Cow position: | chr25:18666434-18666667 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 29, 39 |
| Conread position: | 186-854 |
| Cow position: | chr25:33206635-33205952 (view UCSC Genome Browser custom track) |
| Alignm length: | 706 |
| Alignm identity: | 470 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 14 |
| Conread position: | 212-364 |
| Cow position: | chr25:8015288-8015443 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 440-741 |
| Cow position: | chr25:3688368-3688665 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 213 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 133, 14 |
| Conread position: | 440-741 |
| Cow position: | chr25:17210901-17210605 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 133, 14 |
| Conread position: | 440-741 |
| Cow position: | chr25:17994290-17993993 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 133, 14 |
| Conread position: | 440-741 |
| Cow position: | chr25:21120542-21120843 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 85, 14 |
| Conread position: | 440-741 |
| Cow position: | chr25:29525634-29525338 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 133, 15 |
| Conread position: | 440-741 |
| Cow position: | chr25:32610187-32609890 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 133, 14 |
| Conread position: | 440-741 |
| Cow position: | chr25:34121863-34121564 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 133, 14 |
| Conread position: | 440-741 |
| Cow position: | chr25:36350971-36351268 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 133, 14 |
| Conread position: | 466-745 |
| Cow position: | chr25:30162917-30162634 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 21, 8 |
| Conread position: | 466-846 |
| Cow position: | chr25:18666647-18667039 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 269 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 106, 63 |
| Conread position: | 467-740 |
| Cow position: | chr25:33604466-33604736 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 108, 37 |
| Conread position: | 467-741 |
| Cow position: | chr25:9054911-9055189 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 106, 183 |
| Conread position: | 467-741 |
| Cow position: | chr25:26755719-26755997 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 467-744 |
| Cow position: | chr25:13241851-13242136 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 105, 215 |
| Conread position: | 467-744 |
| Cow position: | chr25:14506827-14506546 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 194 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 467-744 |
| Cow position: | chr25:34013499-34013226 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 188 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 9, 25 |
| Conread position: | 467-744 |
| Cow position: | chr25:35337189-35337467 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 107, 32 |
| Conread position: | 467-746 |
| Cow position: | chr25:4522562-4522287 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 92, 12 |
| Conread position: | 467-746 |
| Cow position: | chr25:36754787-36755063 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 22, 45 |
| Conread position: | 467-750 |
| Cow position: | chr25:17562315-17562605 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 468-651 |
| Cow position: | chr25:17904898-17905077 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 105, 18 |
| Conread position: | 468-699 |
| Cow position: | chr25:26780828-26780598 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 105, 18 |
| Conread position: | 468-738 |
| Cow position: | chr25:41097941-41097672 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 105, 20 |
| Conread position: | 468-741 |
| Cow position: | chr25:5568518-5568247 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 185 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 187, 18 |
| Conread position: | 468-741 |
| Cow position: | chr25:14554925-14555197 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 105, 18 |
| Conread position: | 468-741 |
| Cow position: | chr25:14756157-14755885 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 196 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 105, 18 |
| Conread position: | 468-741 |
| Cow position: | chr25:15429422-15429150 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 105, 18 |
| Conread position: | 468-741 |
| Cow position: | chr25:17808521-17808253 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 105, 18 |
| Conread position: | 468-741 |
| Cow position: | chr25:19139314-19139043 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 105, 18 |
| Conread position: | 468-741 |
| Cow position: | chr25:19923779-19924049 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 121, 18 |
| Conread position: | 468-741 |
| Cow position: | chr25:23601685-23601414 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 105, 18 |
| Conread position: | 468-741 |
| Cow position: | chr25:27076319-27076587 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 196 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 105, 18 |
| Conread position: | 468-741 |
| Cow position: | chr25:29802487-29802215 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 187 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 105, 18 |
| Conread position: | 468-741 |
| Cow position: | chr25:35589335-35589599 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 192 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 105, 18 |
| Conread position: | 468-743 |
| Cow position: | chr25:34508924-34508650 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 105, 18 |
| Conread position: | 468-744 |
| Cow position: | chr25:22760147-22760423 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 105, 29 |
| Conread position: | 468-745 |
| Cow position: | chr25:13332663-13332947 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 7, 62 |
| Conread position: | 468-745 |
| Cow position: | chr25:23845588-23845316 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 10, 37 |
| Conread position: | 468-745 |
| Cow position: | chr25:36564597-36564323 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 48, 11 |
| Conread position: | 468-746 |
| Cow position: | chr25:4858241-4857962 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 105, 18 |
| Conread position: | 468-748 |
| Cow position: | chr25:19330420-19330705 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 468-750 |
| Cow position: | chr25:23356754-23357044 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 468-783 |
| Cow position: | chr25:21024986-21024664 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 105, 112 |
| Conread position: | 468-841 |
| Cow position: | chr25:27609421-27609790 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 241 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 105, 24 |
| Conread position: | 469-745 |
| Cow position: | chr25:2135612-2135893 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 469-750 |
| Cow position: | chr25:24213785-24213501 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 61, 97 |
| Conread position: | 470-745 |
| Cow position: | chr25:7582562-7582289 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 201 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 25, 13 |
| Conread position: | 471-744 |
| Cow position: | chr25:8015428-8015701 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 197 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 144, 103 |
| Conread position: | 471-745 |
| Cow position: | chr25:19367443-19367167 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 98, 172 |
| Conread position: | 471-829 |
| Cow position: | chr25:20369356-20369711 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 245 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 101, 58 |
| Conread position: | 472-744 |
| Cow position: | chr25:34343652-34343378 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 190 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 6, 81 |
| Conread position: | 472-745 |
| Cow position: | chr25:21414217-21413946 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 99, 11 |
| Conread position: | 472-746 |
| Cow position: | chr25:30636489-30636219 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 17, 150 |
| Conread position: | 472-750 |
| Cow position: | chr25:11896238-11895954 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 191 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 8, 102 |
| Conread position: | 473-744 |
| Cow position: | chr25:17995039-17994765 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 191 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 7, 19 |
| Conread position: | 473-744 |
| Cow position: | chr25:26282282-26282557 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 184 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 100, 228 |
| Conread position: | 473-751 |
| Cow position: | chr25:18886226-18885942 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 474-637 |
| Cow position: | chr25:21966648-21966812 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 474-654 |
| Cow position: | chr25:12318565-12318384 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 474-689 |
| Cow position: | chr25:35754986-35754769 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 192, 99 |
| Conread position: | 474-718 |
| Cow position: | chr25:11956085-11956335 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 99, 92 |
| Conread position: | 474-718 |
| Cow position: | chr25:23325770-23325520 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 97, 160 |
| Conread position: | 474-741 |
| Cow position: | chr25:8655550-8655819 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 182 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 99, 81 |
| Conread position: | 474-741 |
| Cow position: | chr25:8935055-8935326 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 186 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 474-741 |
| Cow position: | chr25:13956131-13955860 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 474-741 |
| Cow position: | chr25:13960318-13960589 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 474-741 |
| Cow position: | chr25:18190119-18189849 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 99, 17 |
| Conread position: | 474-741 |
| Cow position: | chr25:18330516-18330242 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 101, 121 |
| Conread position: | 474-741 |
| Cow position: | chr25:20772080-20771807 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 474-741 |
| Cow position: | chr25:34164303-34164032 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 474-741 |
| Cow position: | chr25:35553927-35554198 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 188 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 474-741 |
| Cow position: | chr25:36127648-36127378 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 99, 60 |
| Conread position: | 474-744 |
| Cow position: | chr25:9595575-9595846 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 99, 55 |
| Conread position: | 474-744 |
| Cow position: | chr25:18324098-18323826 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 183 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 99, 65 |
| Conread position: | 474-744 |
| Cow position: | chr25:25510148-25510422 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 474-744 |
| Cow position: | chr25:28863131-28863402 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 99, 55 |
| Conread position: | 474-745 |
| Cow position: | chr25:24303008-24302733 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 99, 244 |
| Conread position: | 474-745 |
| Cow position: | chr25:27231609-27231881 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 99, 39 |
| Conread position: | 474-746 |
| Cow position: | chr25:19337068-19336792 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 182 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 474-750 |
| Cow position: | chr25:11665922-11666203 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 99, 60 |
| Conread position: | 474-750 |
| Cow position: | chr25:17992888-17992606 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 188 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 64, 28 |
| Conread position: | 474-750 |
| Cow position: | chr25:22711547-22711824 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 192 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 99, 34 |
| Conread position: | 474-750 |
| Cow position: | chr25:24636886-24636607 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 15, 103 |
| Conread position: | 474-854 |
| Cow position: | chr25:18237073-18237447 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 249 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 101, 77 |
| Conread position: | 475-689 |
| Cow position: | chr25:13787224-13787442 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 475-738 |
| Cow position: | chr25:18490330-18490598 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 17, 64 |
| Conread position: | 475-744 |
| Cow position: | chr25:35446204-35446473 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 98, 35 |
| Conread position: | 475-750 |
| Cow position: | chr25:32607256-32606983 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 98, 29 |
| Conread position: | 476-723 |
| Cow position: | chr25:27145683-27145934 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 476-744 |
| Cow position: | chr25:41121262-41121537 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 479-738 |
| Cow position: | chr25:2047294-2047034 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 94, 11 |
| Conread position: | 479-744 |
| Cow position: | chr25:39386568-39386302 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 94, 136 |
| Conread position: | 480-741 |
| Cow position: | chr25:35335209-35334945 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 94, 72 |
| Conread position: | 481-745 |
| Cow position: | chr25:1860188-1859922 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 176 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 15, 120 |
| Conread position: | 484-744 |
| Cow position: | chr25:35567622-35567357 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 484-750 |
| Cow position: | chr25:11540390-11540665 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 184 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 487-742 |
| Cow position: | chr25:1765302-1765556 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 86, 103 |
| Conread position: | 488-830 |
| Cow position: | chr25:31954692-31954345 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 231 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 85, 102 |
| Conread position: | 491-741 |
| Cow position: | chr25:10158017-10158271 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 491-750 |
| Cow position: | chr25:20613809-20614077 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 182 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 81, 43 |
| Conread position: | 491-750 |
| Cow position: | chr25:21903713-21903973 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 83, 168 |
| Conread position: | 493-689 |
| Cow position: | chr25:6607408-6607208 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 493-695 |
| Cow position: | chr25:17657890-17658097 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 493-712 |
| Cow position: | chr25:22111572-22111790 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 80, 138 |
| Conread position: | 493-741 |
| Cow position: | chr25:9413621-9413872 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 493-744 |
| Cow position: | chr25:34502409-34502154 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 493-745 |
| Cow position: | chr25:22935349-22935591 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 80, 116 |
| Conread position: | 493-745 |
| Cow position: | chr25:34237318-34237060 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 78, 202 |
| Conread position: | 493-750 |
| Cow position: | chr25:41356523-41356262 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 80, 104 |
| Conread position: | 494-723 |
| Cow position: | chr25:15617977-15618209 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 79, 29 |
| Conread position: | 494-746 |
| Cow position: | chr25:15284860-15285118 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 81, 150 |
| Conread position: | 495-729 |
| Cow position: | chr25:12098321-12098086 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 81, 72 |
| Conread position: | 497-741 |
| Cow position: | chr25:13967679-13967432 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 76, 38 |
| Conread position: | 499-741 |
| Cow position: | chr25:22197865-22198111 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 500-850 |
| Cow position: | chr25:14973925-14973579 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 229 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 73, 34 |
| Conread position: | 503-750 |
| Cow position: | chr25:18154315-18154564 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 12, 158 |
| Conread position: | 504-750 |
| Cow position: | chr25:17450409-17450161 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 70, 140 |
| Conread position: | 504-752 |
| Cow position: | chr25:36700925-36701174 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 69, 86 |
| Conread position: | 505-741 |
| Cow position: | chr25:25794622-25794382 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 506-741 |
| Cow position: | chr25:7068811-7069050 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 518-746 |
| Cow position: | chr25:25731850-25732079 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 57, 199 |
| Conread position: | 523-825 |
| Cow position: | chr25:1025133-1024815 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 51, 7 |
| Conread position: | 529-745 |
| Cow position: | chr25:17592862-17592650 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 45, 97 |
| Conread position: | 641-850 |
| Cow position: | chr25:29740820-29740596 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 25, 0 |
Show alignments to all cow chromosomes.