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Cow genome map

           
Conread name:
           
Ss1.1-Thy1-THY010008D08.5
        

               
Conread position:
               
7-363
               

               
Cow position:
               
chr5:39467837-39468206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
11, 71
               

               
Conread position:
               
14-358
               

               
Cow position:
               
chr5:34962176-34961830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
5, 11
               

               
Conread position:
               
15-358
               

               
Cow position:
               
chr5:41648391-41648737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
68, 10
               

               
Conread position:
               
16-325
               

               
Cow position:
               
chr5:47740980-47741293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
5, 52
               

               
Conread position:
               
30-290
               

               
Cow position:
               
chr5:21946029-21946293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
64, 37
               

               
Conread position:
               
30-312
               

               
Cow position:
               
chr5:56961528-56961823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
46, 151
               

               
Conread position:
               
30-323
               

               
Cow position:
               
chr5:40708482-40708787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
32, 11
               

               
Conread position:
               
30-355
               

               
Cow position:
               
chr5:4437366-4437695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
62, 37
               

               
Conread position:
               
30-356
               

               
Cow position:
               
chr5:76050389-76050074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
16, 11
               

               
Conread position:
               
30-358
               

               
Cow position:
               
chr5:9954382-9954039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
68, 39
               

               
Conread position:
               
30-358
               

               
Cow position:
               
chr5:24240079-24240413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
44, 191
               

               
Conread position:
               
30-360
               

               
Cow position:
               
chr5:74778867-74778518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
65, 53
               

               
Conread position:
               
30-362
               

               
Cow position:
               
chr5:62416619-62416938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
54, 42
               

               
Conread position:
               
30-364
               

               
Cow position:
               
chr5:37715647-37715305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
39, 23
               

               
Conread position:
               
30-364
               

               
Cow position:
               
chr5:54821647-54821311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
42, 122
               

               
Conread position:
               
30-365
               

               
Cow position:
               
chr5:51069177-51069523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
50, 37
               

               
Conread position:
               
30-384
               

               
Cow position:
               
chr5:55111916-55112271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
30, 52
               

               
Conread position:
               
30-398
               

               
Cow position:
               
chr5:59732257-59732612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
17, 38
               

               
Conread position:
               
32-358
               

               
Cow position:
               
chr5:49816513-49816852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
51, 31
               

               
Conread position:
               
33-358
               

               
Cow position:
               
chr5:60491147-60490813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
62, 7
               

               
Conread position:
               
35-356
               

               
Cow position:
               
chr5:12234673-12235001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
32, 93
               

               
Conread position:
               
36-364
               

               
Cow position:
               
chr5:51942625-51942966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
47, 31
               

               
Conread position:
               
40-355
               

               
Cow position:
               
chr5:68485384-68485703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
36, 27
               

               
Conread position:
               
41-363
               

               
Cow position:
               
chr5:49070821-49070499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
26, 136
               

               
Conread position:
               
41-364
               

               
Cow position:
               
chr5:15461812-15462146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 176
               

               
Conread position:
               
45-364
               

               
Cow position:
               
chr5:44272696-44273003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
38, 20
               

               
Conread position:
               
46-356
               

               
Cow position:
               
chr5:6720359-6720063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
124, 21
               

               
Conread position:
               
47-362
               

               
Cow position:
               
chr5:53149281-53148955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
20, 56
               

               
Conread position:
               
47-364
               

               
Cow position:
               
chr5:44882615-44882288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
37, 20
               

               
Conread position:
               
48-353
               

               
Cow position:
               
chr5:69858378-69858679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
47, 19
               

               
Conread position:
               
73-356
               

               
Cow position:
               
chr5:63073336-63073040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
17, 41
               

               
Conread position:
               
83-358
               

               
Cow position:
               
chr5:57792033-57791754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
9, 20
               

               
Conread position:
               
83-364
               

               
Cow position:
               
chr5:54169805-54170089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
73, 16
               

               
Conread position:
               
91-354
               

               
Cow position:
               
chr5:31668496-31668764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
76, 28
               

               
Conread position:
               
91-362
               

               
Cow position:
               
chr5:35488183-35487910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
184, 15
               

               
Conread position:
               
92-364
               

               
Cow position:
               
chr5:820416-820676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
104, 37
               

               
Conread position:
               
92-364
               

               
Cow position:
               
chr5:42233248-42232976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
103, 110
               

               
Conread position:
               
93-358
               

               
Cow position:
               
chr5:67424007-67423749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
184, 72
               

               
Conread position:
               
93-362
               

               
Cow position:
               
chr5:40772185-40771906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
75, 32
               

               
Conread position:
               
150-356
               

               
Cow position:
               
chr5:36224041-36223830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
66, 111
               

               
Conread position:
               
150-358
               

               
Cow position:
               
chr5:2481213-2481001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
26, 21
               

               
Conread position:
               
186-364
               

               
Cow position:
               
chr5:20017772-20017588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
35, 147
               

               
Conread position:
               
211-360
               

               
Cow position:
               
chr5:50990471-50990626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
246-359
               

               
Cow position:
               
chr5:29200352-29200238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
253-813
               

               
Cow position:
               
chr5:18549876-18550441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
20, 55
               

               
Conread position:
               
437-631
               

               
Cow position:
               
chr5:68469455-68469261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
32, 47
               

               
Conread position:
               
437-741
               

               
Cow position:
               
chr5:35497785-35498084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
136, 17
               

               
Conread position:
               
438-741
               

               
Cow position:
               
chr5:50622976-50622669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
27, 19
               

               
Conread position:
               
440-653
               

               
Cow position:
               
chr5:6694814-6695019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
133, 14
               

               
Conread position:
               
440-689
               

               
Cow position:
               
chr5:12325309-12325064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
133, 14
               

               
Conread position:
               
440-741
               

               
Cow position:
               
chr5:351578-351281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
133, 14
               

               
Conread position:
               
440-741
               

               
Cow position:
               
chr5:825488-825785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
133, 14
               

               
Conread position:
               
440-741
               

               
Cow position:
               
chr5:5106503-5106799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
133, 14
               

               
Conread position:
               
440-741
               

               
Cow position:
               
chr5:6772845-6773142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
133, 14
               

               
Conread position:
               
440-741
               

               
Cow position:
               
chr5:10261144-10260848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
133, 14
               

               
Conread position:
               
440-741
               

               
Cow position:
               
chr5:10479366-10479067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
149, 14
               

               
Conread position:
               
440-741
               

               
Cow position:
               
chr5:11835182-11834885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
133, 14
               

               
Conread position:
               
440-741
               

               
Cow position:
               
chr5:23882050-23881754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
133, 14
               

               
Conread position:
               
440-741
               

               
Cow position:
               
chr5:31709580-31709868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
133, 14
               

               
Conread position:
               
440-741
               

               
Cow position:
               
chr5:34683082-34682786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
133, 14
               

               
Conread position:
               
440-741
               

               
Cow position:
               
chr5:36369712-36369415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
133, 14
               

               
Conread position:
               
440-741
               

               
Cow position:
               
chr5:37609729-37609432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
133, 14
               

               
Conread position:
               
440-741
               

               
Cow position:
               
chr5:37626126-37626423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
133, 14
               

               
Conread position:
               
440-741
               

               
Cow position:
               
chr5:38663005-38663298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
133, 14
               

               
Conread position:
               
440-741
               

               
Cow position:
               
chr5:41586554-41586851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
133, 14
               

               
Conread position:
               
440-741
               

               
Cow position:
               
chr5:43395572-43395869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
133, 14
               

               
Conread position:
               
440-741
               

               
Cow position:
               
chr5:45179567-45179272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
133, 14
               

               
Conread position:
               
440-741
               

               
Cow position:
               
chr5:46779794-46780087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
133, 14
               

               
Conread position:
               
440-741
               

               
Cow position:
               
chr5:47565037-47564740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
133, 14
               

               
Conread position:
               
440-741
               

               
Cow position:
               
chr5:47565505-47565208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
133, 14
               

               
Conread position:
               
440-741
               

               
Cow position:
               
chr5:47590314-47590018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
133, 14
               

               
Conread position:
               
440-741
               

               
Cow position:
               
chr5:54927642-54927349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
133, 14
               

               
Conread position:
               
440-741
               

               
Cow position:
               
chr5:54929970-54929677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
133, 14
               

               
Conread position:
               
440-741
               

               
Cow position:
               
chr5:54951842-54951540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
97, 14
               

               
Conread position:
               
440-741
               

               
Cow position:
               
chr5:56931611-56931314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
133, 14
               

               
Conread position:
               
440-741
               

               
Cow position:
               
chr5:57336084-57335787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
133, 14
               

               
Conread position:
               
440-741
               

               
Cow position:
               
chr5:59146888-59147184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
133, 14
               

               
Conread position:
               
443-741
               

               
Cow position:
               
chr5:46816820-46816527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
130, 11
               

               
Conread position:
               
452-846
               

               
Cow position:
               
chr5:39468173-39468586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
118, 38
               

               
Conread position:
               
455-745
               

               
Cow position:
               
chr5:49126993-49127288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
457-745
               

               
Cow position:
               
chr5:62548038-62548334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
458-741
               

               
Cow position:
               
chr5:20269759-20270045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
46, 21
               

               
Conread position:
               
464-744
               

               
Cow position:
               
chr5:29968907-29969188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
109, 21
               

               
Conread position:
               
465-744
               

               
Cow position:
               
chr5:47750225-47750505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
108, 26
               

               
Conread position:
               
466-738
               

               
Cow position:
               
chr5:18491712-18491985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
107, 16
               

               
Conread position:
               
466-741
               

               
Cow position:
               
chr5:49673043-49672774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
109, 24
               

               
Conread position:
               
466-746
               

               
Cow position:
               
chr5:26335841-26335566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
118, 16
               

               
Conread position:
               
466-846
               

               
Cow position:
               
chr5:37715325-37714922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
13, 60
               

               
Conread position:
               
467-618
               

               
Cow position:
               
chr5:59991024-59991174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
106, 16
               

               
Conread position:
               
467-689
               

               
Cow position:
               
chr5:2959559-2959786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
467-739
               

               
Cow position:
               
chr5:70289613-70289341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
51, 35
               

               
Conread position:
               
467-740
               

               
Cow position:
               
chr5:56677643-56677911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
37, 15
               

               
Conread position:
               
467-741
               

               
Cow position:
               
chr5:20017607-20017336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
95, 117
               

               
Conread position:
               
467-741
               

               
Cow position:
               
chr5:38158666-38158938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
138, 102
               

               
Conread position:
               
467-744
               

               
Cow position:
               
chr5:37758538-37758262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
106, 24
               

               
Conread position:
               
467-744
               

               
Cow position:
               
chr5:74733439-74733718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
82, 24
               

               
Conread position:
               
467-745
               

               
Cow position:
               
chr5:6670882-6670599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
467-745
               

               
Cow position:
               
chr5:50599356-50599627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
106, 185
               

               
Conread position:
               
467-746
               

               
Cow position:
               
chr5:57935819-57935544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
106, 37
               

               
Conread position:
               
467-750
               

               
Cow position:
               
chr5:17027367-17027652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
106, 15
               

               
Conread position:
               
467-750
               

               
Cow position:
               
chr5:41228747-41228462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
123, 56
               

               
Conread position:
               
467-750
               

               
Cow position:
               
chr5:69337070-69337358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
106, 16
               

               
Conread position:
               
467-838
               

               
Cow position:
               
chr5:76050088-76049711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
102, 31
               

               
Conread position:
               
467-840
               

               
Cow position:
               
chr5:28037383-28037769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
111, 62
               

               
Conread position:
               
467-846
               

               
Cow position:
               
chr5:2481017-2480627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
22, 61
               

               
Conread position:
               
467-846
               

               
Cow position:
               
chr5:45609097-45608720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
15, 24
               

               
Conread position:
               
467-853
               

               
Cow position:
               
chr5:13989629-13989230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
32, 119
               

               
Conread position:
               
467-854
               

               
Cow position:
               
chr5:44753024-44752638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
106, 251
               

               
Conread position:
               
468-611
               

               
Cow position:
               
chr5:295566-295705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
104, 18
               

               
Conread position:
               
468-613
               

               
Cow position:
               
chr5:66982370-66982511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
468-654
               

               
Cow position:
               
chr5:23565568-23565750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
105, 18
               

               
Conread position:
               
468-654
               

               
Cow position:
               
chr5:54360816-54360634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
105, 18
               

               
Conread position:
               
468-670
               

               
Cow position:
               
chr5:52829483-52829281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
103, 24
               

               
Conread position:
               
468-673
               

               
Cow position:
               
chr5:38075552-38075348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
105, 18
               

               
Conread position:
               
468-681
               

               
Cow position:
               
chr5:27058334-27058123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
105, 18
               

               
Conread position:
               
468-689
               

               
Cow position:
               
chr5:1395157-1394935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
105, 18
               

               
Conread position:
               
468-699
               

               
Cow position:
               
chr5:40864524-40864295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
105, 18
               

               
Conread position:
               
468-711
               

               
Cow position:
               
chr5:14727158-14726915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
105, 40
               

               
Conread position:
               
468-741
               

               
Cow position:
               
chr5:59837-59561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
105, 130
               

               
Conread position:
               
468-741
               

               
Cow position:
               
chr5:407746-408018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
105, 18
               

               
Conread position:
               
468-741
               

               
Cow position:
               
chr5:1383278-1383550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
105, 18
               

               
Conread position:
               
468-741
               

               
Cow position:
               
chr5:1640570-1640298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
105, 18
               

               
Conread position:
               
468-741
               

               
Cow position:
               
chr5:2395003-2394737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
188, 18
               

               
Conread position:
               
468-741
               

               
Cow position:
               
chr5:2977090-2977364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
105, 13
               

               
Conread position:
               
468-741
               

               
Cow position:
               
chr5:4041442-4041714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
105, 18
               

               
Conread position:
               
468-741
               

               
Cow position:
               
chr5:4683196-4682924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
105, 18
               

               
Conread position:
               
468-741
               

               
Cow position:
               
chr5:4753828-4753557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
105, 18
               

               
Conread position:
               
468-741
               

               
Cow position:
               
chr5:6124858-6124586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
105, 18
               

               
Conread position:
               
468-741
               

               
Cow position:
               
chr5:10418041-10417771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
105, 18
               

               
Conread position:
               
468-741
               

               
Cow position:
               
chr5:10772525-10772253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
105, 18
               

               
Conread position:
               
468-741
               

               
Cow position:
               
chr5:11631680-11631408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
105, 18
               

               
Conread position:
               
468-741
               

               
Cow position:
               
chr5:11986875-11986607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
105, 18
               

               
Conread position:
               
468-741
               

               
Cow position:
               
chr5:26053036-26053308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
105, 18
               

               
Conread position:
               
468-741
               

               
Cow position:
               
chr5:28013162-28013434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
105, 18
               

               
Conread position:
               
468-741
               

               
Cow position:
               
chr5:29633679-29633407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
105, 18
               

               
Conread position:
               
468-741
               

               
Cow position:
               
chr5:35180532-35180810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
468-741
               

               
Cow position:
               
chr5:39216560-39216832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
105, 18
               

               
Conread position:
               
468-741
               

               
Cow position:
               
chr5:39363177-39363449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
105, 18
               

               
Conread position:
               
468-741
               

               
Cow position:
               
chr5:41067315-41067576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
73, 18
               

               
Conread position:
               
468-741
               

               
Cow position:
               
chr5:42283468-42283740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
105, 18
               

               
Conread position:
               
468-741
               

               
Cow position:
               
chr5:43350099-43350371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
105, 18
               

               
Conread position:
               
468-741
               

               
Cow position:
               
chr5:44275900-44276172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
105, 18
               

               
Conread position:
               
468-741
               

               
Cow position:
               
chr5:48026573-48026844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
105, 18
               

               
Conread position:
               
468-741
               

               
Cow position:
               
chr5:52239962-52239690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
105, 18
               

               
Conread position:
               
468-741
               

               
Cow position:
               
chr5:52248449-52248179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
104, 20
               

               
Conread position:
               
468-741
               

               
Cow position:
               
chr5:52822903-52822632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
105, 18
               

               
Conread position:
               
468-741
               

               
Cow position:
               
chr5:58900739-58900467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
105, 18
               

               
Conread position:
               
468-741
               

               
Cow position:
               
chr5:59518711-59518439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
105, 18
               

               
Conread position:
               
468-741
               

               
Cow position:
               
chr5:60376936-60376663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
105, 18
               

               
Conread position:
               
468-741
               

               
Cow position:
               
chr5:64061632-64061904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
105, 18
               

               
Conread position:
               
468-741
               

               
Cow position:
               
chr5:67423762-67423483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
9, 62
               

               
Conread position:
               
468-741
               

               
Cow position:
               
chr5:70960872-70960596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
12, 261
               

               
Conread position:
               
468-743
               

               
Cow position:
               
chr5:13718856-13718582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
116, 23
               

               
Conread position:
               
468-744
               

               
Cow position:
               
chr5:18882239-18881959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
85, 61
               

               
Conread position:
               
468-744
               

               
Cow position:
               
chr5:25496112-25495831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
9, 103
               

               
Conread position:
               
468-745
               

               
Cow position:
               
chr5:62159622-62159341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
468-748
               

               
Cow position:
               
chr5:58192220-58192499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
104, 18
               

               
Conread position:
               
468-750
               

               
Cow position:
               
chr5:14833331-14833047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
107, 58
               

               
Conread position:
               
468-750
               

               
Cow position:
               
chr5:29827330-29827616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
104, 23
               

               
Conread position:
               
468-846
               

               
Cow position:
               
chr5:49070516-49070125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 139
               

               
Conread position:
               
469-689
               

               
Cow position:
               
chr5:7140794-7140576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
213, 104
               

               
Conread position:
               
469-690
               

               
Cow position:
               
chr5:62416923-62417147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
104, 22
               

               
Conread position:
               
469-699
               

               
Cow position:
               
chr5:4199336-4199102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
20, 10
               

               
Conread position:
               
469-741
               

               
Cow position:
               
chr5:14558153-14557878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
61, 22
               

               
Conread position:
               
469-741
               

               
Cow position:
               
chr5:54038480-54038761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
469-744
               

               
Cow position:
               
chr5:3113827-3114091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
469-744
               

               
Cow position:
               
chr5:46676918-46677190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
187, 22
               

               
Conread position:
               
469-744
               

               
Cow position:
               
chr5:54170072-54170345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
105, 60
               

               
Conread position:
               
469-745
               

               
Cow position:
               
chr5:31145496-31145220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
104, 14
               

               
Conread position:
               
469-745
               

               
Cow position:
               
chr5:39816007-39815731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
115, 35
               

               
Conread position:
               
470-686
               

               
Cow position:
               
chr5:38831520-38831741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
470-695
               

               
Cow position:
               
chr5:74432016-74432238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
44, 34
               

               
Conread position:
               
470-744
               

               
Cow position:
               
chr5:40708793-40709077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
82, 136
               

               
Conread position:
               
470-745
               

               
Cow position:
               
chr5:21220528-21220249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
104, 13
               

               
Conread position:
               
470-745
               

               
Cow position:
               
chr5:32339669-32339378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
470-745
               

               
Cow position:
               
chr5:46295383-46295116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
29, 145
               

               
Conread position:
               
470-746
               

               
Cow position:
               
chr5:19780734-19780450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
470-746
               

               
Cow position:
               
chr5:60519384-60519102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
103, 225
               

               
Conread position:
               
470-750
               

               
Cow position:
               
chr5:1105572-1105297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
103, 21
               

               
Conread position:
               
470-754
               

               
Cow position:
               
chr5:47871771-47871479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
5, 14
               

               
Conread position:
               
470-854
               

               
Cow position:
               
chr5:60275105-60275499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
103, 11
               

               
Conread position:
               
471-739
               

               
Cow position:
               
chr5:69753323-69753045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
52, 21
               

               
Conread position:
               
471-741
               

               
Cow position:
               
chr5:20107727-20107455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
102, 124
               

               
Conread position:
               
471-741
               

               
Cow position:
               
chr5:37288487-37288759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
471-741
               

               
Cow position:
               
chr5:46625973-46625703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
20, 96
               

               
Conread position:
               
471-741
               

               
Cow position:
               
chr5:51746521-51746795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
471-741
               

               
Cow position:
               
chr5:52289059-52289333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
471-742
               

               
Cow position:
               
chr5:26985331-26985610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
18, 43
               

               
Conread position:
               
471-745
               

               
Cow position:
               
chr5:14781643-14781368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
14, 191
               

               
Conread position:
               
471-745
               

               
Cow position:
               
chr5:34678178-34678451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
104, 55
               

               
Conread position:
               
471-750
               

               
Cow position:
               
chr5:40712177-40711893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
102, 160
               

               
Conread position:
               
471-750
               

               
Cow position:
               
chr5:62436423-62436707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
102, 17
               

               
Conread position:
               
471-750
               

               
Cow position:
               
chr5:72345539-72345255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
471-756
               

               
Cow position:
               
chr5:73253916-73253633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
190, 91
               

               
Conread position:
               
471-846
               

               
Cow position:
               
chr5:5393404-5393786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
42, 65
               

               
Conread position:
               
471-846
               

               
Cow position:
               
chr5:22091025-22091400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
101, 37
               

               
Conread position:
               
472-737
               

               
Cow position:
               
chr5:5812806-5812536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
472-741
               

               
Cow position:
               
chr5:5685974-5685704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
472-741
               

               
Cow position:
               
chr5:6060328-6060055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
472-744
               

               
Cow position:
               
chr5:1338618-1338344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
8, 58
               

               
Conread position:
               
472-744
               

               
Cow position:
               
chr5:18558114-18557838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
472-744
               

               
Cow position:
               
chr5:19978611-19978329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
472-744
               

               
Cow position:
               
chr5:47560257-47559981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
8, 258
               

               
Conread position:
               
472-744
               

               
Cow position:
               
chr5:53185200-53184924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
8, 84
               

               
Conread position:
               
472-750
               

               
Cow position:
               
chr5:23641717-23641433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
102, 235
               

               
Conread position:
               
472-750
               

               
Cow position:
               
chr5:25913021-25913304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
8, 230
               

               
Conread position:
               
473-701
               

               
Cow position:
               
chr5:50189256-50189478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
54, 97
               

               
Conread position:
               
473-738
               

               
Cow position:
               
chr5:3544601-3544869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
100, 127
               

               
Conread position:
               
473-738
               

               
Cow position:
               
chr5:9676325-9676058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
12, 19
               

               
Conread position:
               
473-738
               

               
Cow position:
               
chr5:73485581-73485314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
101, 62
               

               
Conread position:
               
473-741
               

               
Cow position:
               
chr5:3500823-3500555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
100, 56
               

               
Conread position:
               
473-741
               

               
Cow position:
               
chr5:5924672-5924406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
100, 74
               

               
Conread position:
               
473-741
               

               
Cow position:
               
chr5:49221194-49220920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
473-744
               

               
Cow position:
               
chr5:12234997-12235270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
26, 128
               

               
Conread position:
               
473-744
               

               
Cow position:
               
chr5:35477993-35478264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
31, 104
               

               
Conread position:
               
473-744
               

               
Cow position:
               
chr5:44709067-44708792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
473-744
               

               
Cow position:
               
chr5:47343178-47343454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
473-750
               

               
Cow position:
               
chr5:43984389-43984670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
100, 127
               

               
Conread position:
               
474-656
               

               
Cow position:
               
chr5:29432283-29432104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
474-665
               

               
Cow position:
               
chr5:40891186-40890996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
25, 9
               

               
Conread position:
               
474-685
               

               
Cow position:
               
chr5:52041183-52040972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
99, 177
               

               
Conread position:
               
474-686
               

               
Cow position:
               
chr5:27178941-27179156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
98, 123
               

               
Conread position:
               
474-689
               

               
Cow position:
               
chr5:21524354-21524569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
99, 177
               

               
Conread position:
               
474-689
               

               
Cow position:
               
chr5:48409150-48408933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
15, 56
               

               
Conread position:
               
474-694
               

               
Cow position:
               
chr5:50981671-50981895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
474-712
               

               
Cow position:
               
chr5:10853528-10853284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
474-712
               

               
Cow position:
               
chr5:55631370-55631615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
474-718
               

               
Cow position:
               
chr5:41547713-41547468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
99, 135
               

               
Conread position:
               
474-718
               

               
Cow position:
               
chr5:55722835-55723083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
474-723
               

               
Cow position:
               
chr5:443003-442750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
474-723
               

               
Cow position:
               
chr5:445785-446038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
474-723
               

               
Cow position:
               
chr5:3970828-3971081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
474-729
               

               
Cow position:
               
chr5:37942504-37942246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
99, 172
               

               
Conread position:
               
474-736
               

               
Cow position:
               
chr5:32088474-32088213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
99, 187
               

               
Conread position:
               
474-736
               

               
Cow position:
               
chr5:47601070-47601335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
99, 17
               

               
Conread position:
               
474-737
               

               
Cow position:
               
chr5:31285163-31285430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
474-738
               

               
Cow position:
               
chr5:45705317-45705580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
25, 12
               

               
Conread position:
               
474-740
               

               
Cow position:
               
chr5:14140946-14141215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
99, 227
               

               
Conread position:
               
474-741
               

               
Cow position:
               
chr5:709845-709575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
99, 9
               

               
Conread position:
               
474-741
               

               
Cow position:
               
chr5:1059261-1058990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
474-741
               

               
Cow position:
               
chr5:5715783-5715511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
25, 12
               

               
Conread position:
               
474-741
               

               
Cow position:
               
chr5:5814794-5814523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
474-741
               

               
Cow position:
               
chr5:5937612-5937876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
182, 99
               

               
Conread position:
               
474-741
               

               
Cow position:
               
chr5:6455357-6455086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
474-741
               

               
Cow position:
               
chr5:15677365-15677633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
99, 55
               

               
Conread position:
               
474-741
               

               
Cow position:
               
chr5:18118669-18118398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
474-741
               

               
Cow position:
               
chr5:21188241-21188508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
101, 9
               

               
Conread position:
               
474-741
               

               
Cow position:
               
chr5:27046214-27046484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
474-741
               

               
Cow position:
               
chr5:27907162-27906891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
99, 150
               

               
Conread position:
               
474-741
               

               
Cow position:
               
chr5:28854620-28854351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
99, 39
               

               
Conread position:
               
474-741
               

               
Cow position:
               
chr5:29634735-29635006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
474-741
               

               
Cow position:
               
chr5:37380392-37380661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
474-741
               

               
Cow position:
               
chr5:38883382-38883112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
99, 39
               

               
Conread position:
               
474-741
               

               
Cow position:
               
chr5:46667380-46667648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
182, 99
               

               
Conread position:
               
474-741
               

               
Cow position:
               
chr5:47704852-47704583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
99, 17
               

               
Conread position:
               
474-741
               

               
Cow position:
               
chr5:48805164-48804893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
474-741
               

               
Cow position:
               
chr5:49103130-49103401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
474-741
               

               
Cow position:
               
chr5:51166004-51165734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
41, 222
               

               
Conread position:
               
474-741
               

               
Cow position:
               
chr5:53075564-53075293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
474-741
               

               
Cow position:
               
chr5:57986801-57987069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
182, 99
               

               
Conread position:
               
474-741
               

               
Cow position:
               
chr5:58322426-58322156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
99, 17
               

               
Conread position:
               
474-741
               

               
Cow position:
               
chr5:59064749-59065020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
474-741
               

               
Cow position:
               
chr5:68273543-68273272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
474-741
               

               
Cow position:
               
chr5:75754818-75754547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
474-743
               

               
Cow position:
               
chr5:11780578-11780289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
474-743
               

               
Cow position:
               
chr5:49117045-49116774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
107, 99
               

               
Conread position:
               
474-744
               

               
Cow position:
               
chr5:279874-279600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
474-744
               

               
Cow position:
               
chr5:411413-411140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
99, 217
               

               
Conread position:
               
474-744
               

               
Cow position:
               
chr5:3789529-3789803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
474-744
               

               
Cow position:
               
chr5:6151526-6151252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
474-744
               

               
Cow position:
               
chr5:7175604-7175878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
99, 166
               

               
Conread position:
               
474-744
               

               
Cow position:
               
chr5:7498679-7498405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
474-744
               

               
Cow position:
               
chr5:10922151-10922425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
99, 224
               

               
Conread position:
               
474-744
               

               
Cow position:
               
chr5:14636273-14635999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
107, 99
               

               
Conread position:
               
474-744
               

               
Cow position:
               
chr5:18250353-18250627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
474-744
               

               
Cow position:
               
chr5:20430628-20430894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
99, 34
               

               
Conread position:
               
474-744
               

               
Cow position:
               
chr5:24087744-24087470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
107, 95
               

               
Conread position:
               
474-744
               

               
Cow position:
               
chr5:24299319-24299593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
474-744
               

               
Cow position:
               
chr5:29742255-29741978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
474-744
               

               
Cow position:
               
chr5:34709075-34709347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
474-744
               

               
Cow position:
               
chr5:43437636-43437364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
181, 0
               

               
Conread position:
               
474-744
               

               
Cow position:
               
chr5:49522010-49522281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
64, 9
               

               
Conread position:
               
474-744
               

               
Cow position:
               
chr5:53005952-53005679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
99, 34
               

               
Conread position:
               
474-744
               

               
Cow position:
               
chr5:54337208-54337478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
116, 55
               

               
Conread position:
               
474-744
               

               
Cow position:
               
chr5:58245638-58245911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
99, 56
               

               
Conread position:
               
474-744
               

               
Cow position:
               
chr5:58770566-58770292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
474-744
               

               
Cow position:
               
chr5:64778695-64778426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
182, 99
               

               
Conread position:
               
474-744
               

               
Cow position:
               
chr5:70593696-70593423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
99, 123
               

               
Conread position:
               
474-745
               

               
Cow position:
               
chr5:4015566-4015291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
474-745
               

               
Cow position:
               
chr5:21828140-21828412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
99, 17
               

               
Conread position:
               
474-745
               

               
Cow position:
               
chr5:46797206-46797479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
99, 17
               

               
Conread position:
               
474-746
               

               
Cow position:
               
chr5:29255908-29255632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
474-746
               

               
Cow position:
               
chr5:48373969-48374246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
474-747
               

               
Cow position:
               
chr5:72857181-72857460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
99, 157
               

               
Conread position:
               
474-750
               

               
Cow position:
               
chr5:10542370-10542090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
102, 81
               

               
Conread position:
               
474-750
               

               
Cow position:
               
chr5:27549208-27548926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
474-759
               

               
Cow position:
               
chr5:12133900-12134188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
99, 9
               

               
Conread position:
               
474-762
               

               
Cow position:
               
chr5:36410134-36409842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
99, 170
               

               
Conread position:
               
475-708
               

               
Cow position:
               
chr5:12872767-12872996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
186, 16
               

               
Conread position:
               
475-741
               

               
Cow position:
               
chr5:11638826-11639091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
98, 8
               

               
Conread position:
               
475-741
               

               
Cow position:
               
chr5:31217396-31217665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
98, 16
               

               
Conread position:
               
475-741
               

               
Cow position:
               
chr5:34886370-34886094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
98, 133
               

               
Conread position:
               
475-741
               

               
Cow position:
               
chr5:39936405-39936678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
98, 267
               

               
Conread position:
               
475-744
               

               
Cow position:
               
chr5:69771457-69771731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
475-745
               

               
Cow position:
               
chr5:21118942-21119215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
24, 260
               

               
Conread position:
               
475-745
               

               
Cow position:
               
chr5:48247505-48247777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
14, 55
               

               
Conread position:
               
475-750
               

               
Cow position:
               
chr5:13206098-13205812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
475-750
               

               
Cow position:
               
chr5:59268730-59269007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
98, 12
               

               
Conread position:
               
475-751
               

               
Cow position:
               
chr5:41333894-41334171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
98, 51
               

               
Conread position:
               
475-841
               

               
Cow position:
               
chr5:18844334-18844702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
95, 169
               

               
Conread position:
               
476-741
               

               
Cow position:
               
chr5:66256932-66257200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
97, 11
               

               
Conread position:
               
476-743
               

               
Cow position:
               
chr5:13807453-13807183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
97, 31
               

               
Conread position:
               
476-745
               

               
Cow position:
               
chr5:397051-396778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
13, 94
               

               
Conread position:
               
476-745
               

               
Cow position:
               
chr5:14939534-14939271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
12, 175
               

               
Conread position:
               
476-745
               

               
Cow position:
               
chr5:23648127-23647857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
97, 259
               

               
Conread position:
               
476-745
               

               
Cow position:
               
chr5:27656162-27656435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
476-745
               

               
Cow position:
               
chr5:34559445-34559715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
101, 94
               

               
Conread position:
               
476-745
               

               
Cow position:
               
chr5:37047211-37047486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
476-750
               

               
Cow position:
               
chr5:58004532-58004808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
38, 107
               

               
Conread position:
               
476-803
               

               
Cow position:
               
chr5:48225276-48224946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
23, 11
               

               
Conread position:
               
479-738
               

               
Cow position:
               
chr5:14551290-14551029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
479-738
               

               
Cow position:
               
chr5:28375193-28374928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
20, 235
               

               
Conread position:
               
479-744
               

               
Cow position:
               
chr5:4071158-4071427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
479-750
               

               
Cow position:
               
chr5:55088179-55088453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
105, 8
               

               
Conread position:
               
482-745
               

               
Cow position:
               
chr5:16206845-16206586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
91, 175
               

               
Conread position:
               
483-744
               

               
Cow position:
               
chr5:45168461-45168199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
92, 133
               

               
Conread position:
               
483-745
               

               
Cow position:
               
chr5:54693802-54693535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
16, 210
               

               
Conread position:
               
483-746
               

               
Cow position:
               
chr5:25930594-25930332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
11, 129
               

               
Conread position:
               
483-750
               

               
Cow position:
               
chr5:58320691-58320964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
13, 131
               

               
Conread position:
               
483-757
               

               
Cow position:
               
chr5:35207550-35207828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
16, 269
               

               
Conread position:
               
483-808
               

               
Cow position:
               
chr5:51502189-51502523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
90, 185
               

               
Conread position:
               
483-850
               

               
Cow position:
               
chr5:28678133-28677772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
90, 112
               

               
Conread position:
               
484-706
               

               
Cow position:
               
chr5:41980701-41980926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
484-720
               

               
Cow position:
               
chr5:28016371-28016609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
11, 216
               

               
Conread position:
               
484-744
               

               
Cow position:
               
chr5:24101965-24102230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
484-745
               

               
Cow position:
               
chr5:42671716-42671453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
27, 74
               

               
Conread position:
               
484-745
               

               
Cow position:
               
chr5:51070499-51070760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
89, 22
               

               
Conread position:
               
484-745
               

               
Cow position:
               
chr5:70402179-70402436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
171, 26
               

               
Conread position:
               
484-746
               

               
Cow position:
               
chr5:19561188-19560928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
89, 173
               

               
Conread position:
               
484-821
               

               
Cow position:
               
chr5:24544129-24543782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
5, 109
               

               
Conread position:
               
486-750
               

               
Cow position:
               
chr5:57125322-57125592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
487-686
               

               
Cow position:
               
chr5:58797449-58797245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
487-744
               

               
Cow position:
               
chr5:63631189-63631449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
86, 137
               

               
Conread position:
               
487-750
               

               
Cow position:
               
chr5:48574480-48574217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
86, 139
               

               
Conread position:
               
489-745
               

               
Cow position:
               
chr5:23683793-23683531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
493-686
               

               
Cow position:
               
chr5:18703114-18702917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
493-688
               

               
Cow position:
               
chr5:5682180-5681982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
80, 122
               

               
Conread position:
               
493-709
               

               
Cow position:
               
chr5:42932988-42932771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
77, 36
               

               
Conread position:
               
493-741
               

               
Cow position:
               
chr5:4963061-4962810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
80, 33
               

               
Conread position:
               
493-741
               

               
Cow position:
               
chr5:10514444-10514696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
493-741
               

               
Cow position:
               
chr5:19284177-19283926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
80, 107
               

               
Conread position:
               
493-741
               

               
Cow position:
               
chr5:24633399-24633651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
493-741
               

               
Cow position:
               
chr5:37782810-37782558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
493-744
               

               
Cow position:
               
chr5:2917782-2918035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
56, 81
               

               
Conread position:
               
493-750
               

               
Cow position:
               
chr5:46235508-46235245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
80, 133
               

               
Conread position:
               
493-750
               

               
Cow position:
               
chr5:48542996-48542737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
80, 30
               

               
Conread position:
               
494-712
               

               
Cow position:
               
chr5:15761042-15760828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
79, 88
               

               
Conread position:
               
495-745
               

               
Cow position:
               
chr5:35261772-35262025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
14, 135
               

               
Conread position:
               
495-750
               

               
Cow position:
               
chr5:72041508-72041769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
496-737
               

               
Cow position:
               
chr5:23006797-23006560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
496-750
               

               
Cow position:
               
chr5:33472200-33471945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
77, 163
               

               
Conread position:
               
497-744
               

               
Cow position:
               
chr5:26134151-26133900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
497-750
               

               
Cow position:
               
chr5:35967512-35967764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
78, 38
               

               
Conread position:
               
498-741
               

               
Cow position:
               
chr5:28331015-28330771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
75, 153
               

               
Conread position:
               
500-689
               

               
Cow position:
               
chr5:9412590-9412397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
501-741
               

               
Cow position:
               
chr5:46587732-46587488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
503-741
               

               
Cow position:
               
chr5:29223365-29223607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
505-750
               

               
Cow position:
               
chr5:30816025-30816277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
507-708
               

               
Cow position:
               
chr5:820689-820891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
65, 118
               

               
Conread position:
               
510-741
               

               
Cow position:
               
chr5:7066881-7066646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
510-745
               

               
Cow position:
               
chr5:49816871-49817100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
65, 25
               

               
Conread position:
               
513-689
               

               
Cow position:
               
chr5:30486591-30486769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
514-744
               

               
Cow position:
               
chr5:56090601-56090829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
191, 41
               

               
Conread position:
               
515-744
               

               
Cow position:
               
chr5:57147917-57148147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
60, 25
               

               
Conread position:
               
516-746
               

               
Cow position:
               
chr5:44532612-44532846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
517-741
               

               
Cow position:
               
chr5:35543008-35543236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
522-741
               

               
Cow position:
               
chr5:27321765-27321543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
51, 121
               

               
Conread position:
               
523-737
               

               
Cow position:
               
chr5:46845718-46845500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
523-741
               

               
Cow position:
               
chr5:40864233-40864011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
534-741
               

               
Cow position:
               
chr5:19915146-19915357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
534-741
               

               
Cow position:
               
chr5:37431150-37430939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
534-741
               

               
Cow position:
               
chr5:37432458-37432247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
39, 195
               

               
Conread position:
               
534-813
               

               
Cow position:
               
chr5:18689006-18689290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
37, 117
               

               
Conread position:
               
534-861
               

               
Cow position:
               
chr5:57966306-57965955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
37, 74
               

               
Conread position:
               
535-743
               

               
Cow position:
               
chr5:32699269-32699058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
40, 110
               

               
Conread position:
               
537-741
               

               
Cow position:
               
chr5:10299716-10299924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
539-741
               

               
Cow position:
               
chr5:11989111-11988905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
556-745
               

               
Cow position:
               
chr5:53406198-53406007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
575-745
               

               
Cow position:
               
chr5:4438071-4438244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
92, 0
               
Show alignments to all cow chromosomes.