Non-Coding RNA Search

Cow genome map


           Conread name:
           Ss1.1-Thy1-THY010008D08.5
        

               Conread position:
               6-335
               

               Cow position:
               chrX:27646123-27646458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               77, 24
               

               Conread position:
               7-361
               

               Cow position:
               chrX:6026781-6026407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               262
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               14, 182
               

               Conread position:
               7-364
               

               Cow position:
               chrX:27508364-27508004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               239
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               9, 64
               

               Conread position:
               16-362
               

               Cow position:
               chrX:37959564-37959909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               247
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               8, 15
               

               Conread position:
               16-365
               

               Cow position:
               chrX:23314869-23314517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               229
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               30, 9
               

               Conread position:
               16-365
               

               Cow position:
               chrX:31803823-31804182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               242
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               56, 14
               

               Conread position:
               17-363
               

               Cow position:
               chrX:30685126-30684766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               249
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               43, 66
               

               Conread position:
               22-343
               

               Cow position:
               chrX:37753362-37753684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               224
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               65, 44
               

               Conread position:
               30-341
               

               Cow position:
               chrX:24951576-24951256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               238
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               46, 37
               

               Conread position:
               30-351
               

               Cow position:
               chrX:15135353-15135024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               233
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               54, 9
               

               Conread position:
               30-355
               

               Cow position:
               chrX:23326856-23326532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               53, 11
               

               Conread position:
               30-358
               

               Cow position:
               chrX:18153519-18153189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               235
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               53, 11
               

               Conread position:
               30-358
               

               Cow position:
               chrX:41860456-41860779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               226
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               67, 35
               

               Conread position:
               30-360
               

               Cow position:
               chrX:10823146-10822816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               235
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               53, 32
               

               Conread position:
               31-358
               

               Cow position:
               chrX:8455504-8455856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               241
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               53, 34
               

               Conread position:
               31-364
               

               Cow position:
               chrX:32003460-32003128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               227
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               21, 43
               

               Conread position:
               45-362
               

               Cow position:
               chrX:44491469-44491140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               226
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               29, 87
               

               Conread position:
               46-323
               

               Cow position:
               chrX:37416621-37416337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               144, 21
               

               Conread position:
               46-332
               

               Cow position:
               chrX:25357631-25357910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               228, 21
               

               Conread position:
               47-261
               

               Cow position:
               chrX:13603477-13603261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               36, 22
               

               Conread position:
               73-336
               

               Cow position:
               chrX:36085902-36086165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               19, 103
               

               Conread position:
               83-362
               

               Cow position:
               chrX:16858666-16858396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               9, 88
               

               Conread position:
               83-362
               

               Cow position:
               chrX:43789813-43789541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               18, 34
               

               Conread position:
               84-354
               

               Cow position:
               chrX:25146568-25146846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               185
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               68, 93
               

               Conread position:
               84-361
               

               Cow position:
               chrX:17158800-17158521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               122, 38
               

               Conread position:
               91-358
               

               Cow position:
               chrX:29196770-29197042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               131, 21
               

               Conread position:
               91-362
               

               Cow position:
               chrX:7308710-7308984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               104, 24
               

               Conread position:
               91-363
               

               Cow position:
               chrX:10410074-10409794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               79, 84
               

               Conread position:
               91-364
               

               Cow position:
               chrX:25449872-25450144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               208
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               76, 84
               

               Conread position:
               91-364
               

               Cow position:
               chrX:31453586-31453311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               95, 257
               

               Conread position:
               91-364
               

               Cow position:
               chrX:31933883-31933607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               208
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               79, 22
               

               Conread position:
               92-358
               

               Cow position:
               chrX:2570100-2569832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               191
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               113, 13
               

               Conread position:
               92-358
               

               Cow position:
               chrX:24129327-24129594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               75, 41
               

               Conread position:
               115-362
               

               Cow position:
               chrX:25280783-25280528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               55, 34
               

               Conread position:
               178-363
               

               Cow position:
               chrX:12869314-12869120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               8, 71
               

               Conread position:
               179-365
               

               Cow position:
               chrX:18599107-18598915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               25, 161
               

               Conread position:
               201-364
               

               Cow position:
               chrX:42042262-42042091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               204-364
               

               Cow position:
               chrX:27408329-27408167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               20, 129
               

               Conread position:
               249-741
               

               Cow position:
               chrX:27595125-27594627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               499
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               440-611
               

               Cow position:
               chrX:13206208-13206372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               133, 14
               

               Conread position:
               440-654
               

               Cow position:
               chrX:16086867-16086660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               133, 14
               

               Conread position:
               440-665
               

               Cow position:
               chrX:14124990-14124772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               133, 14
               

               Conread position:
               440-689
               

               Cow position:
               chrX:2813226-2812981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               133, 14
               

               Conread position:
               440-738
               

               Cow position:
               chrX:5289430-5289137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               133, 14
               

               Conread position:
               440-741
               

               Cow position:
               chrX:3081875-3081578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               131, 14
               

               Conread position:
               440-741
               

               Cow position:
               chrX:3464821-3464523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               204
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               133, 14
               

               Conread position:
               440-741
               

               Cow position:
               chrX:5406316-5406612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               203
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               133, 14
               

               Conread position:
               440-741
               

               Cow position:
               chrX:6581190-6581487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               133, 14
               

               Conread position:
               440-741
               

               Cow position:
               chrX:7096714-7097011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               206
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               133, 14
               

               Conread position:
               440-741
               

               Cow position:
               chrX:7755161-7755454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               133, 14
               

               Conread position:
               440-741
               

               Cow position:
               chrX:8641044-8641341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               210
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               133, 14
               

               Conread position:
               440-741
               

               Cow position:
               chrX:11566170-11566467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               133, 14
               

               Conread position:
               440-741
               

               Cow position:
               chrX:12360144-12360441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               133, 14
               

               Conread position:
               440-741
               

               Cow position:
               chrX:14458911-14458614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               133, 14
               

               Conread position:
               440-741
               

               Cow position:
               chrX:14782089-14781793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               133, 14
               

               Conread position:
               440-741
               

               Cow position:
               chrX:16285467-16285764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               133, 14
               

               Conread position:
               440-741
               

               Cow position:
               chrX:17994715-17995012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               133, 14
               

               Conread position:
               440-741
               

               Cow position:
               chrX:19399034-19399331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               133, 14
               

               Conread position:
               440-741
               

               Cow position:
               chrX:19473903-19473607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               131, 14
               

               Conread position:
               440-741
               

               Cow position:
               chrX:22564431-22564134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               133, 14
               

               Conread position:
               440-741
               

               Cow position:
               chrX:25289423-25289126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               133, 14
               

               Conread position:
               440-741
               

               Cow position:
               chrX:26617665-26617368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               133, 14
               

               Conread position:
               440-741
               

               Cow position:
               chrX:28503592-28503889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               133, 14
               

               Conread position:
               440-741
               

               Cow position:
               chrX:28588227-28588524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               205
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               133, 14
               

               Conread position:
               440-741
               

               Cow position:
               chrX:30159735-30159442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               204
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               133, 14
               

               Conread position:
               440-741
               

               Cow position:
               chrX:35533110-35533404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               133, 14
               

               Conread position:
               440-741
               

               Cow position:
               chrX:38014350-38014647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               133, 14
               

               Conread position:
               440-741
               

               Cow position:
               chrX:39730883-39730587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               133, 14
               

               Conread position:
               440-743
               

               Cow position:
               chrX:5866402-5866701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               132, 14
               

               Conread position:
               440-745
               

               Cow position:
               chrX:34518982-34519283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               133, 14
               

               Conread position:
               442-656
               

               Cow position:
               chrX:11588435-11588222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               6, 16
               

               Conread position:
               443-741
               

               Cow position:
               chrX:22521962-22521668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               208
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               130, 11
               

               Conread position:
               443-741
               

               Cow position:
               chrX:26275397-26275692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               130, 11
               

               Conread position:
               456-750
               

               Cow position:
               chrX:14263511-14263214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               16, 76
               

               Conread position:
               458-741
               

               Cow position:
               chrX:1576998-1576710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               194
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               15, 189
               

               Conread position:
               460-750
               

               Cow position:
               chrX:12996591-12996295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               32, 211
               

               Conread position:
               462-745
               

               Cow position:
               chrX:37955171-37955455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               18, 46
               

               Conread position:
               464-625
               

               Cow position:
               chrX:3804965-3805125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               26, 22
               

               Conread position:
               464-741
               

               Cow position:
               chrX:11855442-11855722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               181
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               109, 10
               

               Conread position:
               464-827
               

               Cow position:
               chrX:20869954-20869590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               248
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               76, 18
               

               Conread position:
               466-677
               

               Cow position:
               chrX:30430086-30429869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               466-741
               

               Cow position:
               chrX:32039559-32039289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               107, 20
               

               Conread position:
               466-741
               

               Cow position:
               chrX:40268751-40269029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               107, 17
               

               Conread position:
               466-742
               

               Cow position:
               chrX:42042111-42041841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               106, 21
               

               Conread position:
               466-745
               

               Cow position:
               chrX:20131604-20131333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               30, 42
               

               Conread position:
               466-746
               

               Cow position:
               chrX:12092752-12092469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               30, 15
               

               Conread position:
               466-750
               

               Cow position:
               chrX:19211262-19210975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               14, 231
               

               Conread position:
               467-657
               

               Cow position:
               chrX:20503918-20504112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               467-657
               

               Cow position:
               chrX:20976774-20976581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               467-702
               

               Cow position:
               chrX:677821-677581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               467-718
               

               Cow position:
               chrX:37886064-37885812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               106, 94
               

               Conread position:
               467-738
               

               Cow position:
               chrX:39559091-39558816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               21, 12
               

               Conread position:
               467-741
               

               Cow position:
               chrX:6372458-6372734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               13, 25
               

               Conread position:
               467-743
               

               Cow position:
               chrX:24163175-24162904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               202
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               31, 55
               

               Conread position:
               467-744
               

               Cow position:
               chrX:24129581-24129871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               208
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               105, 35
               

               Conread position:
               467-744
               

               Cow position:
               chrX:27408186-27407905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               106, 24
               

               Conread position:
               467-744
               

               Cow position:
               chrX:40545347-40545066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               467-745
               

               Cow position:
               chrX:34990335-34990617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               24, 226
               

               Conread position:
               467-750
               

               Cow position:
               chrX:3211269-3210982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               189
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               106, 24
               

               Conread position:
               467-750
               

               Cow position:
               chrX:26844782-26845069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               20, 107
               

               Conread position:
               467-750
               

               Cow position:
               chrX:37489001-37489290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               106, 26
               

               Conread position:
               467-765
               

               Cow position:
               chrX:11522247-11522547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               28, 57
               

               Conread position:
               467-809
               

               Cow position:
               chrX:44491157-44490796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               245
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               129, 46
               

               Conread position:
               467-837
               

               Cow position:
               chrX:15345148-15345521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               254
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               108, 20
               

               Conread position:
               467-840
               

               Cow position:
               chrX:25144361-25144740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               250
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               28, 107
               

               Conread position:
               467-844
               

               Cow position:
               chrX:1960491-1960888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               467-846
               

               Cow position:
               chrX:6026423-6026040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               279
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               105, 24
               

               Conread position:
               467-846
               

               Cow position:
               chrX:23832156-23831778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               260
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               106, 24
               

               Conread position:
               467-846
               

               Cow position:
               chrX:41114476-41114871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               400
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 144
               

               Conread position:
               467-850
               

               Cow position:
               chrX:15574607-15574214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               195, 20
               

               Conread position:
               467-850
               

               Cow position:
               chrX:19541063-19540676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               393
               

               Alignm identity:
               249
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               28, 178
               

               Conread position:
               468-608
               

               Cow position:
               chrX:11509113-11509255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               29, 20
               

               Conread position:
               468-621
               

               Cow position:
               chrX:31605067-31604918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               105, 18
               

               Conread position:
               468-654
               

               Cow position:
               chrX:41886109-41886291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               105, 18
               

               Conread position:
               468-660
               

               Cow position:
               chrX:37682035-37681843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               51, 43
               

               Conread position:
               468-689
               

               Cow position:
               chrX:11409053-11408833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               105, 18
               

               Conread position:
               468-689
               

               Cow position:
               chrX:32643767-32643987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               105, 18
               

               Conread position:
               468-689
               

               Cow position:
               chrX:38839910-38840134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               105, 62
               

               Conread position:
               468-737
               

               Cow position:
               chrX:2274201-2274466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               181
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               105, 18
               

               Conread position:
               468-737
               

               Cow position:
               chrX:28156811-28157083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               105, 224
               

               Conread position:
               468-738
               

               Cow position:
               chrX:22812338-22812612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               105, 231
               

               Conread position:
               468-741
               

               Cow position:
               chrX:362172-361900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               105, 18
               

               Conread position:
               468-741
               

               Cow position:
               chrX:2293319-2293047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               105, 18
               

               Conread position:
               468-741
               

               Cow position:
               chrX:3096472-3096202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               105, 13
               

               Conread position:
               468-741
               

               Cow position:
               chrX:3372572-3372300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               105, 18
               

               Conread position:
               468-741
               

               Cow position:
               chrX:4343032-4343302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               194
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               105, 18
               

               Conread position:
               468-741
               

               Cow position:
               chrX:5124078-5123806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               105, 18
               

               Conread position:
               468-741
               

               Cow position:
               chrX:5392294-5392022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               105, 18
               

               Conread position:
               468-741
               

               Cow position:
               chrX:5646823-5646551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               105, 18
               

               Conread position:
               468-741
               

               Cow position:
               chrX:5892509-5892781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               105, 18
               

               Conread position:
               468-741
               

               Cow position:
               chrX:6406630-6406899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               112, 23
               

               Conread position:
               468-741
               

               Cow position:
               chrX:6453978-6454249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               105, 19
               

               Conread position:
               468-741
               

               Cow position:
               chrX:7119363-7119091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               105, 18
               

               Conread position:
               468-741
               

               Cow position:
               chrX:11146052-11145784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               105, 18
               

               Conread position:
               468-741
               

               Cow position:
               chrX:12001866-12001594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               105, 13
               

               Conread position:
               468-741
               

               Cow position:
               chrX:13030930-13030658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               105, 18
               

               Conread position:
               468-741
               

               Cow position:
               chrX:13928470-13928200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               192
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               105, 18
               

               Conread position:
               468-741
               

               Cow position:
               chrX:14049913-14049641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               105, 18
               

               Conread position:
               468-741
               

               Cow position:
               chrX:14801539-14801265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               105, 18
               

               Conread position:
               468-741
               

               Cow position:
               chrX:15346688-15346416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               105, 18
               

               Conread position:
               468-741
               

               Cow position:
               chrX:16046428-16046700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               105, 18
               

               Conread position:
               468-741
               

               Cow position:
               chrX:17782781-17783052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               105, 18
               

               Conread position:
               468-741
               

               Cow position:
               chrX:19109760-19109488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               105, 18
               

               Conread position:
               468-741
               

               Cow position:
               chrX:21343676-21343947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               186
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               105, 18
               

               Conread position:
               468-741
               

               Cow position:
               chrX:22887940-22888211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               107, 23
               

               Conread position:
               468-741
               

               Cow position:
               chrX:24320991-24320719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               105, 18
               

               Conread position:
               468-741
               

               Cow position:
               chrX:24509148-24509420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               105, 18
               

               Conread position:
               468-741
               

               Cow position:
               chrX:28133390-28133663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               19, 85
               

               Conread position:
               468-741
               

               Cow position:
               chrX:28313706-28313978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               105, 18
               

               Conread position:
               468-741
               

               Cow position:
               chrX:29841888-29841616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               105, 18
               

               Conread position:
               468-741
               

               Cow position:
               chrX:30196578-30196850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               105, 13
               

               Conread position:
               468-741
               

               Cow position:
               chrX:30199711-30199439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               105, 13
               

               Conread position:
               468-741
               

               Cow position:
               chrX:31978560-31978288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               191
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               105, 18
               

               Conread position:
               468-741
               

               Cow position:
               chrX:33763625-33763897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               105, 18
               

               Conread position:
               468-741
               

               Cow position:
               chrX:34253510-34253782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               105, 18
               

               Conread position:
               468-741
               

               Cow position:
               chrX:36195373-36195645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               105, 18
               

               Conread position:
               468-741
               

               Cow position:
               chrX:36479354-36479082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               105, 18
               

               Conread position:
               468-741
               

               Cow position:
               chrX:36729665-36729937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               105, 18
               

               Conread position:
               468-741
               

               Cow position:
               chrX:37852420-37852692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               105, 18
               

               Conread position:
               468-741
               

               Cow position:
               chrX:38007705-38007425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               105, 25
               

               Conread position:
               468-741
               

               Cow position:
               chrX:39713832-39714104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               187
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               105, 18
               

               Conread position:
               468-745
               

               Cow position:
               chrX:4408833-4409116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               19, 154
               

               Conread position:
               468-745
               

               Cow position:
               chrX:10256864-10256585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               23, 11
               

               Conread position:
               468-745
               

               Cow position:
               chrX:37363998-37364274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               105, 192
               

               Conread position:
               468-750
               

               Cow position:
               chrX:4633580-4633293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               13, 26
               

               Conread position:
               468-750
               

               Cow position:
               chrX:10465066-10465349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               202
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               105, 18
               

               Conread position:
               468-750
               

               Cow position:
               chrX:11083326-11083046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               198
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               193, 19
               

               Conread position:
               468-750
               

               Cow position:
               chrX:35609266-35609550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               116, 24
               

               Conread position:
               468-750
               

               Cow position:
               chrX:39560371-39560088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               105, 18
               

               Conread position:
               468-756
               

               Cow position:
               chrX:44206238-44206530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               190
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               31, 262
               

               Conread position:
               468-846
               

               Cow position:
               chrX:10409811-10409414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               400
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 23
               

               Conread position:
               469-689
               

               Cow position:
               chrX:6279324-6279105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               186, 13
               

               Conread position:
               469-723
               

               Cow position:
               chrX:23987820-23988076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               18, 163
               

               Conread position:
               469-738
               

               Cow position:
               chrX:10146390-10146117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               176
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               469-741
               

               Cow position:
               chrX:516788-517061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               469-741
               

               Cow position:
               chrX:2486351-2486077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               104, 23
               

               Conread position:
               469-741
               

               Cow position:
               chrX:9011608-9011880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               104, 22
               

               Conread position:
               469-741
               

               Cow position:
               chrX:9899062-9898787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               186
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               41, 22
               

               Conread position:
               469-741
               

               Cow position:
               chrX:20020860-20021130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               104, 22
               

               Conread position:
               469-741
               

               Cow position:
               chrX:30821860-30822137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               188
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               469-741
               

               Cow position:
               chrX:38961569-38961293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               469-744
               

               Cow position:
               chrX:23280290-23280563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               104, 22
               

               Conread position:
               469-744
               

               Cow position:
               chrX:27977553-27977275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               56, 22
               

               Conread position:
               469-745
               

               Cow position:
               chrX:45464725-45465003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               120, 102
               

               Conread position:
               469-750
               

               Cow position:
               chrX:37781795-37781515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               104, 33
               

               Conread position:
               469-750
               

               Cow position:
               chrX:40365466-40365180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               470-637
               

               Cow position:
               chrX:26622360-26622195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               103, 8
               

               Conread position:
               470-654
               

               Cow position:
               chrX:27754708-27754892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               103, 17
               

               Conread position:
               470-682
               

               Cow position:
               chrX:33767299-33767512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               104, 59
               

               Conread position:
               470-698
               

               Cow position:
               chrX:32368674-32368905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               29, 145
               

               Conread position:
               470-741
               

               Cow position:
               chrX:11819646-11819917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               103, 23
               

               Conread position:
               470-741
               

               Cow position:
               chrX:12290016-12290290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               181
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               103, 208
               

               Conread position:
               470-745
               

               Cow position:
               chrX:28820014-28820295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               470-750
               

               Cow position:
               chrX:4751097-4750808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               470-750
               

               Cow position:
               chrX:10412693-10412409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               102, 16
               

               Conread position:
               470-760
               

               Cow position:
               chrX:39556513-39556219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               102, 21
               

               Conread position:
               471-685
               

               Cow position:
               chrX:12102686-12102465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               101, 154
               

               Conread position:
               471-699
               

               Cow position:
               chrX:15340579-15340347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               471-707
               

               Cow position:
               chrX:37684236-37683997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               100, 22
               

               Conread position:
               471-737
               

               Cow position:
               chrX:23927905-23927637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               46, 33
               

               Conread position:
               471-741
               

               Cow position:
               chrX:15621253-15620979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               104, 230
               

               Conread position:
               471-741
               

               Cow position:
               chrX:18462696-18462422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               471-741
               

               Cow position:
               chrX:38330661-38330935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               471-745
               

               Cow position:
               chrX:22102495-22102217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               184
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               102, 222
               

               Conread position:
               471-745
               

               Cow position:
               chrX:36097676-36097949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               196
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               99, 20
               

               Conread position:
               471-745
               

               Cow position:
               chrX:42539878-42540156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               104, 174
               

               Conread position:
               471-750
               

               Cow position:
               chrX:2300159-2300444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               184
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               471-750
               

               Cow position:
               chrX:21592569-21592851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               190
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               9, 103
               

               Conread position:
               471-751
               

               Cow position:
               chrX:3952133-3952414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 20
               

               Conread position:
               472-689
               

               Cow position:
               chrX:21833150-21833370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               101, 11
               

               Conread position:
               472-712
               

               Cow position:
               chrX:37403955-37403712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               101, 11
               

               Conread position:
               472-714
               

               Cow position:
               chrX:29759967-29760215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               472-741
               

               Cow position:
               chrX:9169335-9169061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               472-741
               

               Cow position:
               chrX:15091489-15091216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               472-741
               

               Cow position:
               chrX:15260340-15260066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               187
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               472-741
               

               Cow position:
               chrX:16465580-16465853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               191
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               6, 22
               

               Conread position:
               472-741
               

               Cow position:
               chrX:21255055-21255329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               472-741
               

               Cow position:
               chrX:27423004-27422728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               8, 40
               

               Conread position:
               472-741
               

               Cow position:
               chrX:30172428-30172155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               472-741
               

               Cow position:
               chrX:40224963-40224690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               27, 135
               

               Conread position:
               472-750
               

               Cow position:
               chrX:23341712-23341429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               101, 154
               

               Conread position:
               472-777
               

               Cow position:
               chrX:19657776-19658085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               8, 292
               

               Conread position:
               472-854
               

               Cow position:
               chrX:37943453-37943069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               255
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               23, 109
               

               Conread position:
               473-735
               

               Cow position:
               chrX:2500350-2500084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               473-741
               

               Cow position:
               chrX:8434922-8434651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               100, 141
               

               Conread position:
               473-741
               

               Cow position:
               chrX:21768085-21768357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               473-744
               

               Cow position:
               chrX:26531254-26531515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               187
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               183, 50
               

               Conread position:
               473-750
               

               Cow position:
               chrX:16782561-16782844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               197
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               474-611
               

               Cow position:
               chrX:7444189-7444327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               474-611
               

               Cow position:
               chrX:39292936-39292798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               474-652
               

               Cow position:
               chrX:1550247-1550426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               107, 99
               

               Conread position:
               474-654
               

               Cow position:
               chrX:22077060-22076879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               474-654
               

               Cow position:
               chrX:39698285-39698465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               97, 176
               

               Conread position:
               474-684
               

               Cow position:
               chrX:40580881-40580667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               150
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               474-686
               

               Cow position:
               chrX:44018983-44019195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               82, 35
               

               Conread position:
               474-689
               

               Cow position:
               chrX:5248667-5248885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               474-689
               

               Cow position:
               chrX:5375646-5375859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               99, 116
               

               Conread position:
               474-689
               

               Cow position:
               chrX:7551519-7551302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               99, 81
               

               Conread position:
               474-689
               

               Cow position:
               chrX:30228832-30228613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               474-694
               

               Cow position:
               chrX:39548681-39548905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               159
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               99, 150
               

               Conread position:
               474-700
               

               Cow position:
               chrX:11976163-11975934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               99, 9
               

               Conread position:
               474-712
               

               Cow position:
               chrX:23452163-23451921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               474-737
               

               Cow position:
               chrX:2382748-2383015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               176
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               59, 222
               

               Conread position:
               474-738
               

               Cow position:
               chrX:24769575-24769310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               474-739
               

               Cow position:
               chrX:22601129-22600862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               99, 39
               

               Conread position:
               474-741
               

               Cow position:
               chrX:1056104-1055839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               96, 12
               

               Conread position:
               474-741
               

               Cow position:
               chrX:2103687-2103958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               185
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               474-741
               

               Cow position:
               chrX:2160047-2160318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               474-741
               

               Cow position:
               chrX:2559678-2559407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               474-741
               

               Cow position:
               chrX:2932438-2932167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               474-741
               

               Cow position:
               chrX:3361103-3361374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               474-741
               

               Cow position:
               chrX:4501709-4501977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               92, 17
               

               Conread position:
               474-741
               

               Cow position:
               chrX:5305883-5306154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               474-741
               

               Cow position:
               chrX:5320436-5320166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               99, 126
               

               Conread position:
               474-741
               

               Cow position:
               chrX:5332151-5331884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               101, 39
               

               Conread position:
               474-741
               

               Cow position:
               chrX:5334533-5334266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               101, 39
               

               Conread position:
               474-741
               

               Cow position:
               chrX:6870282-6870010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               180
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               474-741
               

               Cow position:
               chrX:7695062-7695333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               474-741
               

               Cow position:
               chrX:9128338-9128609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               185
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               474-741
               

               Cow position:
               chrX:9642150-9641879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               189
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               474-741
               

               Cow position:
               chrX:10866588-10866314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               191
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               63, 222
               

               Conread position:
               474-741
               

               Cow position:
               chrX:10923289-10923018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               187
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               474-741
               

               Cow position:
               chrX:11358783-11358512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               187
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               474-741
               

               Cow position:
               chrX:12145384-12145648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               99, 218
               

               Conread position:
               474-741
               

               Cow position:
               chrX:12457980-12458250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               99, 126
               

               Conread position:
               474-741
               

               Cow position:
               chrX:15173242-15172974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               99, 153
               

               Conread position:
               474-741
               

               Cow position:
               chrX:16040397-16040127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               99, 17
               

               Conread position:
               474-741
               

               Cow position:
               chrX:16359725-16359456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               182
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               99, 17
               

               Conread position:
               474-741
               

               Cow position:
               chrX:17054851-17055122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               474-741
               

               Cow position:
               chrX:17663637-17663365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               99, 157
               

               Conread position:
               474-741
               

               Cow position:
               chrX:18222695-18222966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               474-741
               

               Cow position:
               chrX:18451797-18451526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               188
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               474-741
               

               Cow position:
               chrX:18488432-18488161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               474-741
               

               Cow position:
               chrX:18656523-18656252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               474-741
               

               Cow position:
               chrX:20032549-20032278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               474-741
               

               Cow position:
               chrX:21685901-21686172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               474-741
               

               Cow position:
               chrX:22612667-22612939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               474-741
               

               Cow position:
               chrX:23134861-23135130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               99, 81
               

               Conread position:
               474-741
               

               Cow position:
               chrX:24413312-24413583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               99, 146
               

               Conread position:
               474-741
               

               Cow position:
               chrX:24467842-24467572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               99, 17
               

               Conread position:
               474-741
               

               Cow position:
               chrX:26506659-26506388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               474-741
               

               Cow position:
               chrX:26760286-26760015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               186
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               474-741
               

               Cow position:
               chrX:26974192-26974463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               474-741
               

               Cow position:
               chrX:27305211-27305480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               179
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               99, 233
               

               Conread position:
               474-741
               

               Cow position:
               chrX:27758989-27759260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               474-741
               

               Cow position:
               chrX:28706384-28706655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               188
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               474-741
               

               Cow position:
               chrX:28753058-28752787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               474-741
               

               Cow position:
               chrX:29170059-29169788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               474-741
               

               Cow position:
               chrX:29225760-29226031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               99, 227
               

               Conread position:
               474-741
               

               Cow position:
               chrX:29912621-29912892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               188
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               474-741
               

               Cow position:
               chrX:30163956-30163686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               177
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               99, 227
               

               Conread position:
               474-741
               

               Cow position:
               chrX:30816987-30816716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               99, 218
               

               Conread position:
               474-741
               

               Cow position:
               chrX:30824930-30825201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               187
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               474-741
               

               Cow position:
               chrX:31496018-31496289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               474-741
               

               Cow position:
               chrX:32330913-32331184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               186
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               474-741
               

               Cow position:
               chrX:34719795-34720066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               187
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               474-741
               

               Cow position:
               chrX:34761348-34761619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               474-741
               

               Cow position:
               chrX:36535453-36535182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               474-741
               

               Cow position:
               chrX:37080237-37079966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               186
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               474-741
               

               Cow position:
               chrX:37815873-37816142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               179
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               99, 147
               

               Conread position:
               474-741
               

               Cow position:
               chrX:38052149-38051879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               188
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               99, 9
               

               Conread position:
               474-741
               

               Cow position:
               chrX:38230985-38230714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               474-741
               

               Cow position:
               chrX:39185455-39185726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               186
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               474-741
               

               Cow position:
               chrX:45236748-45237019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               188
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               474-741
               

               Cow position:
               chrX:45903459-45903730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               474-743
               

               Cow position:
               chrX:3417855-3417583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               187
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               99, 216
               

               Conread position:
               474-743
               

               Cow position:
               chrX:5280571-5280298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               474-743
               

               Cow position:
               chrX:8529822-8530095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               474-744
               

               Cow position:
               chrX:323197-323471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               179
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               474-744
               

               Cow position:
               chrX:865678-865952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               185
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               474-744
               

               Cow position:
               chrX:6493015-6493288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               186
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               99, 126
               

               Conread position:
               474-744
               

               Cow position:
               chrX:11950204-11949937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               99, 55
               

               Conread position:
               474-744
               

               Cow position:
               chrX:12178961-12179230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               99, 161
               

               Conread position:
               474-744
               

               Cow position:
               chrX:13406008-13405741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               113, 99
               

               Conread position:
               474-744
               

               Cow position:
               chrX:16711238-16711511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               99, 121
               

               Conread position:
               474-744
               

               Cow position:
               chrX:16854104-16853833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               99, 78
               

               Conread position:
               474-744
               

               Cow position:
               chrX:18193972-18194246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               474-744
               

               Cow position:
               chrX:18898367-18898095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               99, 171
               

               Conread position:
               474-744
               

               Cow position:
               chrX:18950454-18950184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               99, 242
               

               Conread position:
               474-744
               

               Cow position:
               chrX:20878485-20878206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               182
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               474-744
               

               Cow position:
               chrX:20953815-20954084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               99, 140
               

               Conread position:
               474-744
               

               Cow position:
               chrX:21226759-21227030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               99, 132
               

               Conread position:
               474-744
               

               Cow position:
               chrX:21582725-21582998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               99, 56
               

               Conread position:
               474-744
               

               Cow position:
               chrX:22493289-22493563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               112, 99
               

               Conread position:
               474-744
               

               Cow position:
               chrX:22811172-22811442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               99, 87
               

               Conread position:
               474-744
               

               Cow position:
               chrX:23038711-23038441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               101, 39
               

               Conread position:
               474-744
               

               Cow position:
               chrX:24292397-24292123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               185
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               474-744
               

               Cow position:
               chrX:25459356-25459081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               99, 30
               

               Conread position:
               474-744
               

               Cow position:
               chrX:30144002-30143728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               474-744
               

               Cow position:
               chrX:30180645-30180370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               474-744
               

               Cow position:
               chrX:30455340-30455066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               474-744
               

               Cow position:
               chrX:32584649-32584376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               177
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               99, 126
               

               Conread position:
               474-744
               

               Cow position:
               chrX:38150970-38151244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               190
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               25, 13
               

               Conread position:
               474-744
               

               Cow position:
               chrX:41156593-41156867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               474-745
               

               Cow position:
               chrX:487819-488093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               474-745
               

               Cow position:
               chrX:2323989-2324262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               189
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               99, 145
               

               Conread position:
               474-745
               

               Cow position:
               chrX:4905708-4905433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               474-745
               

               Cow position:
               chrX:7805659-7805933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               114, 99
               

               Conread position:
               474-745
               

               Cow position:
               chrX:38852441-38852716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               474-745
               

               Cow position:
               chrX:44193158-44192886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               99, 216
               

               Conread position:
               474-746
               

               Cow position:
               chrX:10445133-10444856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               474-746
               

               Cow position:
               chrX:10931955-10932232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               190
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               474-746
               

               Cow position:
               chrX:24735227-24735502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               193
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               88, 9
               

               Conread position:
               474-750
               

               Cow position:
               chrX:2579701-2579983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               99, 150
               

               Conread position:
               474-750
               

               Cow position:
               chrX:14598128-14598410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               474-750
               

               Cow position:
               chrX:16278935-16279213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               99, 9
               

               Conread position:
               474-750
               

               Cow position:
               chrX:16688550-16688832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               185
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               112, 99
               

               Conread position:
               474-750
               

               Cow position:
               chrX:23986533-23986812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               99, 9
               

               Conread position:
               474-750
               

               Cow position:
               chrX:27704880-27705157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               99, 126
               

               Conread position:
               474-750
               

               Cow position:
               chrX:29722501-29722776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               99, 9
               

               Conread position:
               474-750
               

               Cow position:
               chrX:30139501-30139220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               183
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               99, 9
               

               Conread position:
               474-750
               

               Cow position:
               chrX:30165389-30165112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               266, 114
               

               Conread position:
               474-750
               

               Cow position:
               chrX:31372744-31373027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               186
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               474-750
               

               Cow position:
               chrX:40384328-40384610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               56, 9
               

               Conread position:
               474-778
               

               Cow position:
               chrX:37795195-37794886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               201
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               11, 76
               

               Conread position:
               474-807
               

               Cow position:
               chrX:27318513-27318850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               99, 250
               

               Conread position:
               474-823
               

               Cow position:
               chrX:16702953-16703320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               236
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               42, 17
               

               Conread position:
               474-832
               

               Cow position:
               chrX:31342491-31342857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               243
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               102, 151
               

               Conread position:
               474-839
               

               Cow position:
               chrX:42212709-42212334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               241
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               32, 25
               

               Conread position:
               475-708
               

               Cow position:
               chrX:38999186-38999422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               161
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               98, 227
               

               Conread position:
               475-712
               

               Cow position:
               chrX:23179521-23179290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               100, 66
               

               Conread position:
               475-738
               

               Cow position:
               chrX:23022596-23022863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               98, 226
               

               Conread position:
               475-739
               

               Cow position:
               chrX:41860770-41861034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               97, 123
               

               Conread position:
               475-741
               

               Cow position:
               chrX:4995898-4996168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               174
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               475-741
               

               Cow position:
               chrX:16478197-16478468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               475-741
               

               Cow position:
               chrX:17291217-17291483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               96, 77
               

               Conread position:
               475-741
               

               Cow position:
               chrX:30053185-30052916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               98, 167
               

               Conread position:
               475-744
               

               Cow position:
               chrX:23387251-23386983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               98, 16
               

               Conread position:
               475-744
               

               Cow position:
               chrX:23395894-23396162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               98, 16
               

               Conread position:
               475-744
               

               Cow position:
               chrX:35240149-35240420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               475-745
               

               Cow position:
               chrX:27983087-27982815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               98, 226
               

               Conread position:
               475-750
               

               Cow position:
               chrX:4482235-4482515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               475-750
               

               Cow position:
               chrX:41879643-41879366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               98, 16
               

               Conread position:
               475-766
               

               Cow position:
               chrX:2207733-2207443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               100, 8
               

               Conread position:
               475-848
               

               Cow position:
               chrX:34115568-34115181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 11
               

               Conread position:
               476-744
               

               Cow position:
               chrX:48855159-48854890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               182
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               33, 144
               

               Conread position:
               476-850
               

               Cow position:
               chrX:37832188-37831795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               252
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               147, 248
               

               Conread position:
               477-740
               

               Cow position:
               chrX:7572665-7572932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               188
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               32, 80
               

               Conread position:
               477-822
               

               Cow position:
               chrX:34866547-34866190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               236
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               96, 198
               

               Conread position:
               478-841
               

               Cow position:
               chrX:21973230-21973605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               254
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               186, 127
               

               Conread position:
               479-586
               

               Cow position:
               chrX:20809444-20809335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               89
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               479-605
               

               Cow position:
               chrX:23326538-23326411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               98
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               479-624
               

               Cow position:
               chrX:17283020-17282874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               479-629
               

               Cow position:
               chrX:24280194-24280341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               94, 50
               

               Conread position:
               479-719
               

               Cow position:
               chrX:40827457-40827215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               94, 164
               

               Conread position:
               479-741
               

               Cow position:
               chrX:14267918-14267653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               181
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               94, 118
               

               Conread position:
               479-741
               

               Cow position:
               chrX:29942439-29942703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               94, 8
               

               Conread position:
               479-744
               

               Cow position:
               chrX:28542596-28542338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               177, 92
               

               Conread position:
               479-744
               

               Cow position:
               chrX:29849342-29849075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               94, 143
               

               Conread position:
               479-745
               

               Cow position:
               chrX:9837404-9837675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               479-750
               

               Cow position:
               chrX:18244268-18244546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               479-751
               

               Cow position:
               chrX:4177105-4177383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               481-750
               

               Cow position:
               chrX:42120592-42120867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               482-689
               

               Cow position:
               chrX:27629140-27629351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               482-738
               

               Cow position:
               chrX:24923139-24923399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               12, 195
               

               Conread position:
               483-745
               

               Cow position:
               chrX:6543556-6543814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               90, 138
               

               Conread position:
               483-745
               

               Cow position:
               chrX:10301412-10301677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               16, 158
               

               Conread position:
               483-854
               

               Cow position:
               chrX:23587090-23587464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               247
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               16, 33
               

               Conread position:
               484-745
               

               Cow position:
               chrX:1810866-1810603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               175
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               14, 46
               

               Conread position:
               484-745
               

               Cow position:
               chrX:17902205-17901948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               11, 112
               

               Conread position:
               484-746
               

               Cow position:
               chrX:15113963-15114230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               485-850
               

               Cow position:
               chrX:6243402-6243020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               248
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               486-754
               

               Cow position:
               chrX:23193296-23193021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               487-745
               

               Cow position:
               chrX:30089755-30089495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               88, 16
               

               Conread position:
               487-745
               

               Cow position:
               chrX:41796824-41797096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               488-683
               

               Cow position:
               chrX:11385671-11385473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               85, 47
               

               Conread position:
               488-728
               

               Cow position:
               chrX:6194031-6193788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               179
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               84, 20
               

               Conread position:
               488-823
               

               Cow position:
               chrX:20021840-20022187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               228
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               84, 91
               

               Conread position:
               491-745
               

               Cow position:
               chrX:21196321-21196579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               491-750
               

               Cow position:
               chrX:17631531-17631269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               178
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               82, 13
               

               Conread position:
               491-750
               

               Cow position:
               chrX:42380543-42380279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               491-842
               

               Cow position:
               chrX:11405985-11406348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               244
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               84, 13
               

               Conread position:
               492-744
               

               Cow position:
               chrX:1048194-1048452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               28, 111
               

               Conread position:
               493-656
               

               Cow position:
               chrX:21500919-21501083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               19, 11
               

               Conread position:
               493-685
               

               Cow position:
               chrX:30727769-30727574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               79, 37
               

               Conread position:
               493-689
               

               Cow position:
               chrX:13915630-13915831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               142
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               493-734
               

               Cow position:
               chrX:26230212-26229970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               80, 36
               

               Conread position:
               493-741
               

               Cow position:
               chrX:4622653-4622401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               493-741
               

               Cow position:
               chrX:13971938-13971686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               493-741
               

               Cow position:
               chrX:14462614-14462862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               80, 20
               

               Conread position:
               493-741
               

               Cow position:
               chrX:15439333-15439084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               163, 80
               

               Conread position:
               493-741
               

               Cow position:
               chrX:20998976-20998723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               170
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               493-741
               

               Cow position:
               chrX:28518419-28518168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               168
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               493-741
               

               Cow position:
               chrX:28559533-28559281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               80, 131
               

               Conread position:
               493-741
               

               Cow position:
               chrX:29064720-29064966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               169
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               163, 80
               

               Conread position:
               493-741
               

               Cow position:
               chrX:29907901-29907649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               493-741
               

               Cow position:
               chrX:30752076-30752327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               493-744
               

               Cow position:
               chrX:2479326-2479071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               493-745
               

               Cow position:
               chrX:4630398-4630143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               171
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               80, 208
               

               Conread position:
               493-745
               

               Cow position:
               chrX:33538232-33538483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               176
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               80, 51
               

               Conread position:
               493-745
               

               Cow position:
               chrX:46296961-46297217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               493-746
               

               Cow position:
               chrX:7486165-7486423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               493-747
               

               Cow position:
               chrX:25451625-25451882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               174
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               80, 101
               

               Conread position:
               493-750
               

               Cow position:
               chrX:7277234-7277497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               42, 147
               

               Conread position:
               493-750
               

               Cow position:
               chrX:11674358-11674619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               80, 42
               

               Conread position:
               493-750
               

               Cow position:
               chrX:21625678-21625415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               493-750
               

               Cow position:
               chrX:25360866-25361125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               187
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               80, 11
               

               Conread position:
               493-857
               

               Cow position:
               chrX:6202808-6203189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               242
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               80, 236
               

               Conread position:
               495-741
               

               Cow position:
               chrX:1976294-1976044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               495-741
               

               Cow position:
               chrX:24173858-24173612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               78, 16
               

               Conread position:
               495-745
               

               Cow position:
               chrX:32071378-32071123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               496-689
               

               Cow position:
               chrX:28766384-28766189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               496-741
               

               Cow position:
               chrX:30965405-30965654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               497-741
               

               Cow position:
               chrX:5408360-5408608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               503-844
               

               Cow position:
               chrX:18152949-18152586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               255
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               59, 218
               

               Conread position:
               504-742
               

               Cow position:
               chrX:8936912-8936674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               70, 112
               

               Conread position:
               504-744
               

               Cow position:
               chrX:26764780-26764536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               164
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               506-738
               

               Cow position:
               chrX:4959751-4959524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               68, 23
               

               Conread position:
               510-741
               

               Cow position:
               chrX:18024358-18024593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               510-743
               

               Cow position:
               chrX:38072449-38072212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               511-750
               

               Cow position:
               chrX:22869586-22869342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               62, 158
               

               Conread position:
               512-711
               

               Cow position:
               chrX:25359500-25359697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               56, 71
               

               Conread position:
               513-745
               

               Cow position:
               chrX:31778112-31777878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               62, 42
               

               Conread position:
               513-750
               

               Cow position:
               chrX:27095440-27095683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               514-744
               

               Cow position:
               chrX:18078589-18078355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               67, 58
               

               Conread position:
               514-768
               

               Cow position:
               chrX:7722284-7722541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               60, 52
               

               Conread position:
               516-726
               

               Cow position:
               chrX:936403-936610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               57, 135
               

               Conread position:
               516-741
               

               Cow position:
               chrX:9018979-9018750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               516-744
               

               Cow position:
               chrX:24951224-24950987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               179
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               65, 57
               

               Conread position:
               516-748
               

               Cow position:
               chrX:20888285-20888049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               516-750
               

               Cow position:
               chrX:11073884-11073647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               25, 29
               

               Conread position:
               517-741
               

               Cow position:
               chrX:21031242-21031470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               59, 127
               

               Conread position:
               520-741
               

               Cow position:
               chrX:11546824-11547043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               523-741
               

               Cow position:
               chrX:9086002-9085780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               523-741
               

               Cow position:
               chrX:19775149-19774927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               523-853
               

               Cow position:
               chrX:10457032-10457375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               234
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               50, 84
               

               Conread position:
               534-694
               

               Cow position:
               chrX:30920046-30919885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               125, 39
               

               Conread position:
               534-735
               

               Cow position:
               chrX:23382841-23382636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               116, 36
               

               Conread position:
               534-741
               

               Cow position:
               chrX:14030360-14030571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               534-745
               

               Cow position:
               chrX:3628117-3628329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               39, 130
               

               Conread position:
               535-745
               

               Cow position:
               chrX:29055262-29055470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               38, 125
               

               Conread position:
               539-738
               

               Cow position:
               chrX:36891168-36891371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               547-844
               

               Cow position:
               chrX:31982273-31981956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               552-745
               

               Cow position:
               chrX:46929709-46929512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               23, 155
               

               Conread position:
               574-744
               

               Cow position:
               chrX:20806322-20806150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               87, 38
               

               Conread position:
               602-846
               

               Cow position:
               chrX:11509478-11509740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               66, 0
               
Show alignments to all cow chromosomes.
Conread position:	6-335
Cow position:	chrX:27646123-27646458 (view UCSC Genome Browser custom track)
Alignm length:	342
Alignm identity:	222
Alignm E-value:	2e-23
Alignm gaps (pig, cow):	77, 24
Conread position:	7-361
Cow position:	chrX:6026781-6026407 (view UCSC Genome Browser custom track)
Alignm length:	376
Alignm identity:	262
Alignm E-value:	2.00386e-43
Alignm gaps (pig, cow):	14, 182
Conread position:	7-364
Cow position:	chrX:27508364-27508004 (view UCSC Genome Browser custom track)
Alignm length:	370
Alignm identity:	239
Alignm E-value:	2e-24
Alignm gaps (pig, cow):	9, 64
Conread position:	16-362
Cow position:	chrX:37959564-37959909 (view UCSC Genome Browser custom track)
Alignm length:	361
Alignm identity:	247
Alignm E-value:	4e-30
Alignm gaps (pig, cow):	8, 15
Conread position:	16-365
Cow position:	chrX:23314869-23314517 (view UCSC Genome Browser custom track)
Alignm length:	360
Alignm identity:	229
Alignm E-value:	6e-25
Alignm gaps (pig, cow):	30, 9
Conread position:	17-363
Cow position:	chrX:30685126-30684766 (view UCSC Genome Browser custom track)
Alignm length:	364
Alignm identity:	249
Alignm E-value:	3e-38
Alignm gaps (pig, cow):	43, 66
Conread position:	22-343
Cow position:	chrX:37753362-37753684 (view UCSC Genome Browser custom track)
Alignm length:	334
Alignm identity:	224
Alignm E-value:	8e-27
Alignm gaps (pig, cow):	65, 44
Conread position:	30-341
Cow position:	chrX:24951576-24951256 (view UCSC Genome Browser custom track)
Alignm length:	328
Alignm identity:	238
Alignm E-value:	3.99931e-42
Alignm gaps (pig, cow):	46, 37
Conread position:	30-351
Cow position:	chrX:15135353-15135024 (view UCSC Genome Browser custom track)
Alignm length:	341
Alignm identity:	233
Alignm E-value:	6e-25
Alignm gaps (pig, cow):	54, 9
Conread position:	30-355
Cow position:	chrX:23326856-23326532 (view UCSC Genome Browser custom track)
Alignm length:	341
Alignm identity:	230
Alignm E-value:	2e-25
Alignm gaps (pig, cow):	53, 11
Conread position:	30-358
Cow position:	chrX:18153519-18153189 (view UCSC Genome Browser custom track)
Alignm length:	337
Alignm identity:	235
Alignm E-value:	1.00053e-42
Alignm gaps (pig, cow):	53, 11
Conread position:	30-360
Cow position:	chrX:10823146-10822816 (view UCSC Genome Browser custom track)
Alignm length:	342
Alignm identity:	235
Alignm E-value:	7e-36
Alignm gaps (pig, cow):	53, 32
Conread position:	31-358
Cow position:	chrX:8455504-8455856 (view UCSC Genome Browser custom track)
Alignm length:	357
Alignm identity:	241
Alignm E-value:	2e-26
Alignm gaps (pig, cow):	53, 34
Conread position:	31-364
Cow position:	chrX:32003460-32003128 (view UCSC Genome Browser custom track)
Alignm length:	343
Alignm identity:	227
Alignm E-value:	8e-27
Alignm gaps (pig, cow):	21, 43
Conread position:	45-362
Cow position:	chrX:44491469-44491140 (view UCSC Genome Browser custom track)
Alignm length:	333
Alignm identity:	226
Alignm E-value:	5e-33
Alignm gaps (pig, cow):	29, 87
Conread position:	46-323
Cow position:	chrX:37416621-37416337 (view UCSC Genome Browser custom track)
Alignm length:	287
Alignm identity:	191
Alignm E-value:	2e-26
Alignm gaps (pig, cow):	144, 21
Conread position:	46-332
Cow position:	chrX:25357631-25357910 (view UCSC Genome Browser custom track)
Alignm length:	290
Alignm identity:	191
Alignm E-value:	2e-23
Alignm gaps (pig, cow):	228, 21
Conread position:	47-261
Cow position:	chrX:13603477-13603261 (view UCSC Genome Browser custom track)
Alignm length:	223
Alignm identity:	160
Alignm E-value:	6e-25
Alignm gaps (pig, cow):	36, 22
Conread position:	73-336
Cow position:	chrX:36085902-36086165 (view UCSC Genome Browser custom track)
Alignm length:	268
Alignm identity:	185
Alignm E-value:	4e-32
Alignm gaps (pig, cow):	19, 103
Conread position:	83-362
Cow position:	chrX:16858666-16858396 (view UCSC Genome Browser custom track)
Alignm length:	284
Alignm identity:	191
Alignm E-value:	2e-22
Alignm gaps (pig, cow):	9, 88